| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244432
Identifier: 21244432
GI number: 21244432
Start: 4383382
End: 4383792
Strand: Reverse
Name: 21244432
Synonym: XAC3707
Alternate gene names: NA
Gene position: 4383792-4383382 (Counterclockwise)
Preceding gene: 21244439
Following gene: 21244431
Centisome position: 84.7
GC content: 64.48
Gene sequence:
>411_bases ATGGCAACTGTCCCCGCATCTCCACACACCTCCGCCTATGGCACCGCCTTGCTGCGTATTAGCCTGGGCGTGCTGTTCCT GGTGCATGGCCTGACCAAATTGCTGGTGTTCACTCCGGCCGGCACCGTGGCGTACTTCCAGTCGCTCGGCCTGCCCGGCG CATTGGCCTACGTCAGTATGGCGCTGGAGCTCGGCCTTGGCGTTTCGCTGCTGTTGGGCCTCTATGCGCGCTGGGTCGCC CTGCTGGGCGTGCCGCTATTGCTGGGCACGATTGTCAGCGTGCATGGTGCGAACGGGTTCGGTTTTTCCAATCCGGGTGG CGGCTGGGAATACCCGGCGTTATGGGCGGTGCTGCTGATCGTGCAGGCGTTGCTCGGCGACGGCGCATTCGCGTTGCAGC CATCGCGCTGA
Upstream 100 bases:
>100_bases TCCGATTGTTCCTTTTGCCGAAATAAATTATCTGAAGCACGCGTATTTATCAGATTTTTGTAAGGAATAGGCTGTGGCGG TCCTCAACGGAGCCCGTCCC
Downstream 100 bases:
>100_bases GCCTGTTTCCATCCATCAAGGAGCTGTCCATGACCCGCTTGCCCTCCCTGTATATCTCGCACGGCTCGCCGATGACTGCG CTGCAGCCGGGGCAGGTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: DoxD-Like Family Protein; Transmembrane Protein; Oxidoreductase CatD; DoxD-Like Protein; Surfeit Locus 4-Related
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MATVPASPHTSAYGTALLRISLGVLFLVHGLTKLLVFTPAGTVAYFQSLGLPGALAYVSMALELGLGVSLLLGLYARWVA LLGVPLLLGTIVSVHGANGFGFSNPGGGWEYPALWAVLLIVQALLGDGAFALQPSR
Sequences:
>Translated_136_residues MATVPASPHTSAYGTALLRISLGVLFLVHGLTKLLVFTPAGTVAYFQSLGLPGALAYVSMALELGLGVSLLLGLYARWVA LLGVPLLLGTIVSVHGANGFGFSNPGGGWEYPALWAVLLIVQALLGDGAFALQPSR >Mature_135_residues ATVPASPHTSAYGTALLRISLGVLFLVHGLTKLLVFTPAGTVAYFQSLGLPGALAYVSMALELGLGVSLLLGLYARWVAL LGVPLLLGTIVSVHGANGFGFSNPGGGWEYPALWAVLLIVQALLGDGAFALQPSR
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14003; Mature: 13872
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVPASPHTSAYGTALLRISLGVLFLVHGLTKLLVFTPAGTVAYFQSLGLPGALAYVSM CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH ALELGLGVSLLLGLYARWVALLGVPLLLGTIVSVHGANGFGFSNPGGGWEYPALWAVLLI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH VQALLGDGAFALQPSR HHHHHCCCCCCCCCCC >Mature Secondary Structure ATVPASPHTSAYGTALLRISLGVLFLVHGLTKLLVFTPAGTVAYFQSLGLPGALAYVSM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHH ALELGLGVSLLLGLYARWVALLGVPLLLGTIVSVHGANGFGFSNPGGGWEYPALWAVLLI HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH VQALLGDGAFALQPSR HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA