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The map label for this gene is rsmC [H]

Identifier: 21244404

GI number: 21244404

Start: 4356308

End: 4357375

Strand: Reverse

Name: rsmC [H]

Synonym: XAC3679

Alternate gene names: 21244404

Gene position: 4357375-4356308 (Counterclockwise)

Preceding gene: 21244406

Following gene: 21244403

Centisome position: 84.19

GC content: 68.45

Gene sequence:

>1068_bases
ATGGCTGGCCCGCACGACGCCCCGCTTCAAGCCCTGTTCCTGCCCTTTGCCCAAGGCGCGCTGCCGTGGCCGGAAGGACC
GGTCTTGTTTCTGCGCGCGCGCGACGGTTTTCCGCTGCGCGAGCGGGCAACCACCCAGACGCTGACCTGCGAGCAGAGCT
TTCGCCCGTTCGCCGAAGCGCTGGAGCGCAATGGGTGGACCGTGCGGGAAGAAAGCGAGATCGAGGCCGACAGCACGCGT
TATGCCCTGGTGCTGGTGCTGCCTCCGCGGCAGCGCGAAGAGGCGCGTGCGCTGTTTGCACGTGCGGTGGCGCTGACTGC
TCCCGGTGGCCGTGTGGTTGCCTGCCAGTCCAACAACGAAGGCGCACGCTCGGGCGAGGCCGATCTGCGCCAGCTCACCG
GACTGGCCGGTAGCCTGACCAAGTACCACTGCCGCACCTACTGGAGCGCGCCGCTGCCGGCCGACACCGATGCCGCGCTG
CAGGCGCGCTGGGCAGCGCTGGATGCGCCACGCAAGATTCTGGACGGCCGCTTTGTCAGCCGTCCCGGCGTCTTCGCCTG
GGATCGCATCGACCCGGCGTCTGCACTGCTGGTCGAGCATCTGCCCACCACGCTGGCCGGCCATGGCGCCGATCTGGGGG
CGGGCTTCGGTTATCTGTCGGCCGAAGTGCTGGCGCGTTGTCCCAAGGTCACCGCGCTGGATCTGTACGAAGCCGAGGCG
CGCGCATTGACGCTGGCGCGGCGCAACCTGCAGGACAACGCGCATCCGGCGCAGCTGCACTACCACTGGCGCGATGTCAC
GGCCGGGTTAGTGGCGCAATACGATTTCATCGTCAGCAACCCGCCGTTCCATACGCCGTCGCGTGCCGACCGCCCGGATA
TCGGGCAGCGCTTCATTGCGGTGGCCGCACAGGCGCTGCGCCCGGGCGGGCAATTGATGCTGGTCGCCAACCGGCATCTG
CCTTACGAACAGGTGCTCAACGACAGTTTCGGGCAGGTACGCGTGGCTGCCGAACGCGATGGGTTCAAGCTGATCGCGGC
GATCCGCGGCCGCGGAGCGCGCCCATGA

Upstream 100 bases:

>100_bases
TGCGCGCGCATCAATACTCCGTATACACATTGGAAGGCGCGTGGCGGGCATCTGGCACCGGTCCCTTACAATGACGGCCT
GTTCCTGACCCGATGATCCG

Downstream 100 bases:

>100_bases
AGCTGGTCAAACACATCGCCAATCTCGGCTATGGCAGCCGCAAGCAGGTCACCCAGCTGTTCCGGCAGGGCGCGATCACC
GATGCGCAAGGCGAGGTGCT

Product: ribosomal RNA small subunit methyltransferase C

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MAGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLRERATTQTLTCEQSFRPFAEALERNGWTVREESEIEADSTR
YALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAAL
QARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEA
RALTLARRNLQDNAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLMLVANRHL
PYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP

Sequences:

>Translated_355_residues
MAGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLRERATTQTLTCEQSFRPFAEALERNGWTVREESEIEADSTR
YALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAAL
QARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEA
RALTLARRNLQDNAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLMLVANRHL
PYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP
>Mature_354_residues
AGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLRERATTQTLTCEQSFRPFAEALERNGWTVREESEIEADSTRY
ALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNEGARSGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAALQ
ARWAALDAPRKILDGRFVSRPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEAR
ALTLARRNLQDNAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIAVAAQALRPGGQLMLVANRHLP
YEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=267, Percent_Identity=29.9625468164794, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI87082206, Length=191, Percent_Identity=25.6544502617801, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 38847; Mature: 38716

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLRERATTQTLTCEQSFRPFAEA
CCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCCEEEHHHHHHHHHHH
LERNGWTVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNE
HHCCCCEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCC
GARSGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVS
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCEEC
RPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEA
CCCCEEECCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHH
RALTLARRNLQDNAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIA
HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHH
VAAQALRPGGQLMLVANRHLPYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP
HHHHHHCCCCCEEEEECCCCCHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
AGPHDAPLQALFLPFAQGALPWPEGPVLFLRARDGFPLRERATTQTLTCEQSFRPFAEA
CCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHCCCCEEEHHHHHHHHHHH
LERNGWTVREESEIEADSTRYALVLVLPPRQREEARALFARAVALTAPGGRVVACQSNNE
HHCCCCEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHEEECCCCEEEEECCCCC
GARSGEADLRQLTGLAGSLTKYHCRTYWSAPLPADTDAALQARWAALDAPRKILDGRFVS
CCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHCCHHHHCCCEEC
RPGVFAWDRIDPASALLVEHLPTTLAGHGADLGAGFGYLSAEVLARCPKVTALDLYEAEA
CCCCEEECCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHH
RALTLARRNLQDNAHPAQLHYHWRDVTAGLVAQYDFIVSNPPFHTPSRADRPDIGQRFIA
HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHH
VAAQALRPGGQLMLVANRHLPYEQVLNDSFGQVRVAAERDGFKLIAAIRGRGARP
HHHHHHCCCCCEEEEECCCCCHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA