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The map label for this gene is sndH

Identifier: 21244406

GI number: 21244406

Start: 4357979

End: 4359316

Strand: Reverse

Name: sndH

Synonym: XAC3681

Alternate gene names: NA

Gene position: 4359316-4357979 (Counterclockwise)

Preceding gene: 21244407

Following gene: 21244404

Centisome position: 84.23

GC content: 66.07

Gene sequence:

>1338_bases
ATGAATGCATCCCGATTGAAGTTCGCTCGCTGGCCGCTGGCGTTGATGGCGCTTGTCGTCCTCGCCGCGTGCGGCGATAC
GGCGACGTTGGCGATCGAACAGGGGACCGGGCCGGACCCGCAATTGCCCGAGCCGGTGAAGCGTCTGATTCCCACCGTCA
AGGTGGCGCCGGTCAAACGCTGGGCAGCCAATGCCAAGCCCATCGCGGCCGACGATCTGCAGGTTGCCGCGTTTGCGCGC
GATCTGGATCACCCGCGCTGGATCTACGTGCTGCCCAACGGCGATGTGTTGGTGGCCGAAACGGCCGAGCCGCCCAAGCC
CGAAGATGCCGAAGCCGGCGGCGGGCTGCGCAAGAAAGTGCAGGGCGCGATGATGAAAAAGGCCGGCGCGGCGGTGGCGA
GCGCTAATCGCATCACCTTGCTGCGCGATGCCGATGGCGACGGCGTGGCAGAGGTGCGTACGCAGTTCGTCAGCGGCCTG
TTTTCGCCGTTCGGCATGGCGCTGATCGGCGACCGCTTTTATGTCGCCAATGCCGATGCGCTGGTGAGTTTTCCGTACAA
GGCCGGCGACACGCATCTCACCGCCAAGCCGACCTTCGTCGCCAATCTGCCCGGCGGAATCAACCACCATTGGACCAAGT
CGCTGCTGGCCAGCCCGGACGGCAGCAAGCTCTATGTCGGCGTCGGCTCCAACAGCAACGTGGCCGAAAATGGCATGGAA
GCCGAGCTCAATCGTGCGGCGATCCTGGAGATCGACCCAGCCACCGGCAGCAGCCGCGTCTTCGCTGGCGGCTTGCGCAA
CCCGGTGGGCACCGCGTGGGAGCCGCAGAGCAAATCGCTGTGGGTGGTGGTTAACGAGCGCGACGAAATCGGCAGCGACC
TGGTGCCGGACTACCTGACCTCGGTGCGCGGCGGCGGTTTTTACGGCTGGCCGTACAGCTACTACGGCCAGCACGTGGAC
GAGCGGGTCAAACCGCAGAATGCCGAACTGGTGGCCAAAGCGATCAAGCCCGACTACGCGCTCGGCCCGCATACCGCATC
GCTCGGCCTGAGTTTCGCCAGCGGCACCTTGCTGCCCGAGCGTTTCCGCCAGGGCGCCTTCATCGGCCAGCACGGCTCGT
GGAATCGCGACCCGCCCAGCGGCTACAAGGTGCTGTTTGTCCCGTTCGCCGACGGCAAGCCCAATGGTCCGCCGATCACG
GTGCTGGATGGATTCCTGGATGCCGAAGGCAATGCGCAGGGCCGCCCGGTGGGTGTGGCGTCGGACAGTCGCGGCGCACT
GCTGGTGGCCGACGACGTGGGCAACGTGATCTGGCGGGTGACGCCGAAGGCGCGTTGA

Upstream 100 bases:

>100_bases
AGTCATGCCGTGACGGCGGTGTGTTGACGGTGTGTTTACTTCTCACCGTCGCGTTGGCGGCATGATCACTGGCCGACGCA
ACCGTCCAGGTTTGCCCGCA

Downstream 100 bases:

>100_bases
GTCCGCGCGCCGATCGTTTGCGTGGGTCGAGCAAATCGCGTCCGGTAGACGCAAGAACCGGGCAAGAGCCCGGCCTACCA
TGGCGCGGCGTGCCGGCAGC

Product: L-sorbosone dehydrogenase

Products: NA

Alternate protein names: SNDH [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MNASRLKFARWPLALMALVVLAACGDTATLAIEQGTGPDPQLPEPVKRLIPTVKVAPVKRWAANAKPIAADDLQVAAFAR
DLDHPRWIYVLPNGDVLVAETAEPPKPEDAEAGGGLRKKVQGAMMKKAGAAVASANRITLLRDADGDGVAEVRTQFVSGL
FSPFGMALIGDRFYVANADALVSFPYKAGDTHLTAKPTFVANLPGGINHHWTKSLLASPDGSKLYVGVGSNSNVAENGME
AELNRAAILEIDPATGSSRVFAGGLRNPVGTAWEPQSKSLWVVVNERDEIGSDLVPDYLTSVRGGGFYGWPYSYYGQHVD
ERVKPQNAELVAKAIKPDYALGPHTASLGLSFASGTLLPERFRQGAFIGQHGSWNRDPPSGYKVLFVPFADGKPNGPPIT
VLDGFLDAEGNAQGRPVGVASDSRGALLVADDVGNVIWRVTPKAR

Sequences:

>Translated_445_residues
MNASRLKFARWPLALMALVVLAACGDTATLAIEQGTGPDPQLPEPVKRLIPTVKVAPVKRWAANAKPIAADDLQVAAFAR
DLDHPRWIYVLPNGDVLVAETAEPPKPEDAEAGGGLRKKVQGAMMKKAGAAVASANRITLLRDADGDGVAEVRTQFVSGL
FSPFGMALIGDRFYVANADALVSFPYKAGDTHLTAKPTFVANLPGGINHHWTKSLLASPDGSKLYVGVGSNSNVAENGME
AELNRAAILEIDPATGSSRVFAGGLRNPVGTAWEPQSKSLWVVVNERDEIGSDLVPDYLTSVRGGGFYGWPYSYYGQHVD
ERVKPQNAELVAKAIKPDYALGPHTASLGLSFASGTLLPERFRQGAFIGQHGSWNRDPPSGYKVLFVPFADGKPNGPPIT
VLDGFLDAEGNAQGRPVGVASDSRGALLVADDVGNVIWRVTPKAR
>Mature_445_residues
MNASRLKFARWPLALMALVVLAACGDTATLAIEQGTGPDPQLPEPVKRLIPTVKVAPVKRWAANAKPIAADDLQVAAFAR
DLDHPRWIYVLPNGDVLVAETAEPPKPEDAEAGGGLRKKVQGAMMKKAGAAVASANRITLLRDADGDGVAEVRTQFVSGL
FSPFGMALIGDRFYVANADALVSFPYKAGDTHLTAKPTFVANLPGGINHHWTKSLLASPDGSKLYVGVGSNSNVAENGME
AELNRAAILEIDPATGSSRVFAGGLRNPVGTAWEPQSKSLWVVVNERDEIGSDLVPDYLTSVRGGGFYGWPYSYYGQHVD
ERVKPQNAELVAKAIKPDYALGPHTASLGLSFASGTLLPERFRQGAFIGQHGSWNRDPPSGYKVLFVPFADGKPNGPPIT
VLDGFLDAEGNAQGRPVGVASDSRGALLVADDVGNVIWRVTPKAR

Specific function: Converts L-sorbosone into 2-keto-L-gulonic acid (2KGA) [H]

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.burgdorferi BB024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 47276; Mature: 47276

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASRLKFARWPLALMALVVLAACGDTATLAIEQGTGPDPQLPEPVKRLIPTVKVAPVKR
CCCCCCCHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECHHH
WAANAKPIAADDLQVAAFARDLDHPRWIYVLPNGDVLVAETAEPPKPEDAEAGGGLRKKV
HCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH
QGAMMKKAGAAVASANRITLLRDADGDGVAEVRTQFVSGLFSPFGMALIGDRFYVANADA
HHHHHHHHCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCE
LVSFPYKAGDTHLTAKPTFVANLPGGINHHWTKSLLASPDGSKLYVGVGSNSNVAENGME
EEECCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHCCCCC
AELNRAAILEIDPATGSSRVFAGGLRNPVGTAWEPQSKSLWVVVNERDEIGSDLVPDYLT
CCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHH
SVRGGGFYGWPYSYYGQHVDERVKPQNAELVAKAIKPDYALGPHTASLGLSFASGTLLPE
HCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHCCCHHCCCCCHH
RFRQGAFIGQHGSWNRDPPSGYKVLFVPFADGKPNGPPITVLDGFLDAEGNAQGRPVGVA
HHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECEECCCCCCCCCEEEEC
SDSRGALLVADDVGNVIWRVTPKAR
CCCCCEEEEEECCCCEEEEECCCCC
>Mature Secondary Structure
MNASRLKFARWPLALMALVVLAACGDTATLAIEQGTGPDPQLPEPVKRLIPTVKVAPVKR
CCCCCCCHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEECHHH
WAANAKPIAADDLQVAAFARDLDHPRWIYVLPNGDVLVAETAEPPKPEDAEAGGGLRKKV
HCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHH
QGAMMKKAGAAVASANRITLLRDADGDGVAEVRTQFVSGLFSPFGMALIGDRFYVANADA
HHHHHHHHCHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCE
LVSFPYKAGDTHLTAKPTFVANLPGGINHHWTKSLLASPDGSKLYVGVGSNSNVAENGME
EEECCCCCCCCEEEECCEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCCCCHHCCCCC
AELNRAAILEIDPATGSSRVFAGGLRNPVGTAWEPQSKSLWVVVNERDEIGSDLVPDYLT
CCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCHHCCCCHHHHHHH
SVRGGGFYGWPYSYYGQHVDERVKPQNAELVAKAIKPDYALGPHTASLGLSFASGTLLPE
HCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHCCCHHCCCCCHH
RFRQGAFIGQHGSWNRDPPSGYKVLFVPFADGKPNGPPITVLDGFLDAEGNAQGRPVGVA
HHHCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECEECCCCCCCCCEEEEC
SDSRGALLVADDVGNVIWRVTPKAR
CCCCCEEEEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7574579 [H]