| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21244112
Identifier: 21244112
GI number: 21244112
Start: 3993372
End: 3994022
Strand: Direct
Name: 21244112
Synonym: XAC3387
Alternate gene names: NA
Gene position: 3993372-3994022 (Clockwise)
Preceding gene: 21244111
Following gene: 21244122
Centisome position: 77.16
GC content: 66.82
Gene sequence:
>651_bases ATGCATCACGCACGCGCGCACGCCGATACACGAACCCGGGAACGTCGCCATCGCCTGGCACACGAAGCCGCACGCCTGAT GGCCGAAGGCGGCATCCGCGATTTCCATCAAGCCAAGCTCAAGGCTGCCAGCCGGCTCGGCATTCATGACGATGCTTCGC TGCCACGCAATCGCGAGATCGAAGATGCGTTGCGCGAGTACCAGCGCCTGTTCGCCGGACCTGCGCACGGTGCGCGTCTG CGCCAACGTCGCGAAGCCGCGTTGCGGGCGCTTGAATTTCTCAGCCCCTTCCAGCCACGGTTGACCGGCCCGGTGCTGGA CGGCACCGCCGATGCCAACGCGCCGGTGCAATTGCAGCTGCACAGCGACGATGCCGATGCCGTGCGGCGGTTTCTGGAAG AACACCGCATTCCGGCCGAGTCGCGCACGCGCCGGCTGCGCCTGGATCGCGAGCGCAACGGCGAGTTTCCCGTCTGGCTG TTCAGCGCCGAAGACCTGACCTTCGATCTCACCGTGCTGCCCTACGACGCACTGCGGCAGGCGCCACTCTCGCAGCTGGA CGAAAAGCCGATGCCGCGTGCATCGGCCGCGCAGGTGCGACAGTTACTGACGGACGGCGACGGTTCCGGCGGCTCACCAC TGCTGCGCTGA
Upstream 100 bases:
>100_bases CACCGCTGCGTGATCGTCTTTTGCCATGGCATGACGCATTCGCCATGTCTTCATGCAGCTGTTGTAGAGTCCAGATCAGG TTCATTAGGGGAGCCCGGTC
Downstream 100 bases:
>100_bases GGTCGACCATATGATGCGGCTTGCCGATGTGGACGAGCTCCGCACCTCTCTAAGCCGGCGTCGCAACGCCACTGCGGCAA TGCTCGTTTTATTCGGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MHHARAHADTRTRERRHRLAHEAARLMAEGGIRDFHQAKLKAASRLGIHDDASLPRNREIEDALREYQRLFAGPAHGARL RQRREAALRALEFLSPFQPRLTGPVLDGTADANAPVQLQLHSDDADAVRRFLEEHRIPAESRTRRLRLDRERNGEFPVWL FSAEDLTFDLTVLPYDALRQAPLSQLDEKPMPRASAAQVRQLLTDGDGSGGSPLLR
Sequences:
>Translated_216_residues MHHARAHADTRTRERRHRLAHEAARLMAEGGIRDFHQAKLKAASRLGIHDDASLPRNREIEDALREYQRLFAGPAHGARL RQRREAALRALEFLSPFQPRLTGPVLDGTADANAPVQLQLHSDDADAVRRFLEEHRIPAESRTRRLRLDRERNGEFPVWL FSAEDLTFDLTVLPYDALRQAPLSQLDEKPMPRASAAQVRQLLTDGDGSGGSPLLR >Mature_216_residues MHHARAHADTRTRERRHRLAHEAARLMAEGGIRDFHQAKLKAASRLGIHDDASLPRNREIEDALREYQRLFAGPAHGARL RQRREAALRALEFLSPFQPRLTGPVLDGTADANAPVQLQLHSDDADAVRRFLEEHRIPAESRTRRLRLDRERNGEFPVWL FSAEDLTFDLTVLPYDALRQAPLSQLDEKPMPRASAAQVRQLLTDGDGSGGSPLLR
Specific function: Unknown
COG id: COG2413
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24461; Mature: 24461
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHHARAHADTRTRERRHRLAHEAARLMAEGGIRDFHQAKLKAASRLGIHDDASLPRNREI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH EDALREYQRLFAGPAHGARLRQRREAALRALEFLSPFQPRLTGPVLDGTADANAPVQLQL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE HSDDADAVRRFLEEHRIPAESRTRRLRLDRERNGEFPVWLFSAEDLTFDLTVLPYDALRQ CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHH APLSQLDEKPMPRASAAQVRQLLTDGDGSGGSPLLR CHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHHARAHADTRTRERRHRLAHEAARLMAEGGIRDFHQAKLKAASRLGIHDDASLPRNREI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCH EDALREYQRLFAGPAHGARLRQRREAALRALEFLSPFQPRLTGPVLDGTADANAPVQLQL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEE HSDDADAVRRFLEEHRIPAESRTRRLRLDRERNGEFPVWLFSAEDLTFDLTVLPYDALRQ CCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEECCHHHHHH APLSQLDEKPMPRASAAQVRQLLTDGDGSGGSPLLR CHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA