| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is sac1 [C]
Identifier: 21244029
GI number: 21244029
Start: 3882018
End: 3883880
Strand: Direct
Name: sac1 [C]
Synonym: XAC3304
Alternate gene names: 21244029
Gene position: 3882018-3883880 (Clockwise)
Preceding gene: 21244028
Following gene: 21244031
Centisome position: 75.01
GC content: 64.57
Gene sequence:
>1863_bases ATGGACACCGCGCTGACGCTGACCAACGATATGAAGCTCGTCCTCGGGCTGGTCGGTTTCACGATGGCGATGTTCCTGTT CGAGCGCATTCGCGCCGACGTGGTGGCGTTGATCGTGCTGGTGGTCTTGGGCGTCACCGGGCTGGTGGCGCCGGAAGAAC TGTTCGGTGGTTTCTCCGGTAATGCGGTGATGAGCATCATCGCCACCACCATTCTGGGCGCGGGGCTGGAGCGCACCGGC GCGTTGAACCGGTTGGCCACCTGGTTGTTGCGGCGTTCGCACGGCAGCGAGCAGCGCCTGATGATGATGACGCTGGCCAT CTCCGGCTTGAACTCGTCGTTCATGCAGAACCCGTCGGTGATGGCCTTGTACCTGCCGGTCGCCTCGCGCCTGGCCGCAC GCACCGGGCTCACCTTGCAGCGCATGCTGCTGCCGATCGCCGCTGCCATCGTGATGGGCGGCGCGCTCACCATGGTGGGC AATTCGCCGCTGATCCTGCTCAACGACCTGCTGGTCTCGGCCAACAACAACCTGCCCTCGGGTATGGCCAGCATCGAGCC GTTGACGATGTTCGCGCCGCTGCCGATCGGCGTGGCGCTGCTGATCGCCGCACTGCTGTACTTCCGCTTTTACGGCGACC GCAAGCTGATCGAAGAAGAACGCCTGATCAACGAAGGCGTGACGCCCTCCCGCACCGAAAGCTATTTCGCCAAGACCTAT GGCATCGACGGCGATGTGTTCGAGCTGACCGTCACCGCCGAAAGCCCGCTGGTGGGCATGACCCTGGGCGAGGCCGAAGC CTTGCACGATGCGCCGTTGCTGCTGGCGCTCAAGACCGGTAACGACACCCGCCTGGCACCGCCGGCCGATATGCGCATCT GGGTCGGCAGCGTGCTCGGCGCGATGGGCCCGCGCCAGGAAGTGGCCGACTTTGCGCAAAACCAGTTCCTGCGCATGTCC TCGCGCCTGCGCAACCTGGGCGATTTGTTCAATCCCAGCCTGGCCGGTATTTCCGAAGCGTTGATTCCGCCGAACTCACG GTTGATCGGCAAGAGCGCCGGCGAATTGCGCCTGCGCAAGCAGGCAGGCATCAGCCTGCTGGCGATCAACCGCGACAAGC AGGTCATCCGCGAAGACGTGCGCAACGTGCCGCTGCGCGCCGGCGACATGCTGGTCTTCCACAGCATCTGGCAGGACTTG GTGCAGGCGGCGGAAAGCCGCGATTTCGTGCCGGTGACCGACTTCCCCAAAGGCGAGCAGCGCCCGCACAAGTTCAAGAT CGCGATGGCGATCTTCGCCTTCACCATCCTGATTGCGCTGACCTCGCGCCTGCCGGTGGCCCTGACGCTGATGACCGGCG TGGCCTGCATGCTGGTCAGCGGCGTGCTGCGCATGGACGAGGCCTACGCGTCGATCAACTGGAAGACCATCTTCATGATG GCCGGGCTGATTCCGCTGGGCTGGGCAATGGACAGCAGCGGCACCGCGGCCTGGGTGGCCGGCCACACCATCGACCGCCT GCCCGAAGGCATCCCGGTGTGGGCGCTGGAAATCAGCCTGGCCTTGTTGACCACCGCCTTCTCGCTGGTGATCAGCCACG TCGGCGCCACCATCGTGATGGTGCCGATCGCGGTCAATCTGGCGTTGGCGGCCAACGGCAACCCGACCGCGTTCGCGCTG ATCGTGGCGTTGTCGGCGTCCAACAATCTGATGACCGCGTCCAATCCGGTCATCTCGATGGTGGCCGGCCCCGCCAATTA TCAACCGCGCGAATTGTGGCGCGTGGGCGCGCCACTGTCGCTGATCTACATCGTGGTGATGGTGTCGATGATCAACCTGA TGTTCTGGTGGGCGGCGCGCTGA
Upstream 100 bases:
>100_bases CGCAAGAGCAACTGCCTTCGGCATCCGGATAGCGTCTCCTTGCGTCGGCATTACCCGCTTTTCCCATTCTCCATTCCCGA CTCCCTATTCCCGGCCCCCA
Downstream 100 bases:
>100_bases TTCGGCGTTGCGCTTTTTTCGAGCGGCTGACAAAGCGCCATCAGCAATCGTTCCTGGCGCTTACCCCAGCAGCACCTGCT CATCTTCAACCCGAACCGGC
Product: sulfur deprivation response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSGNAVMSIIATTILGAGLERTG ALNRLATWLLRRSHGSEQRLMMMTLAISGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVG NSPLILLNDLLVSANNNLPSGMASIEPLTMFAPLPIGVALLIAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY GIDGDVFELTVTAESPLVGMTLGEAEALHDAPLLLALKTGNDTRLAPPADMRIWVGSVLGAMGPRQEVADFAQNQFLRMS SRLRNLGDLFNPSLAGISEALIPPNSRLIGKSAGELRLRKQAGISLLAINRDKQVIREDVRNVPLRAGDMLVFHSIWQDL VQAAESRDFVPVTDFPKGEQRPHKFKIAMAIFAFTILIALTSRLPVALTLMTGVACMLVSGVLRMDEAYASINWKTIFMM AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGIPVWALEISLALLTTAFSLVISHVGATIVMVPIAVNLALAANGNPTAFAL IVALSASNNLMTASNPVISMVAGPANYQPRELWRVGAPLSLIYIVVMVSMINLMFWWAAR
Sequences:
>Translated_620_residues MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSGNAVMSIIATTILGAGLERTG ALNRLATWLLRRSHGSEQRLMMMTLAISGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVG NSPLILLNDLLVSANNNLPSGMASIEPLTMFAPLPIGVALLIAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY GIDGDVFELTVTAESPLVGMTLGEAEALHDAPLLLALKTGNDTRLAPPADMRIWVGSVLGAMGPRQEVADFAQNQFLRMS SRLRNLGDLFNPSLAGISEALIPPNSRLIGKSAGELRLRKQAGISLLAINRDKQVIREDVRNVPLRAGDMLVFHSIWQDL VQAAESRDFVPVTDFPKGEQRPHKFKIAMAIFAFTILIALTSRLPVALTLMTGVACMLVSGVLRMDEAYASINWKTIFMM AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGIPVWALEISLALLTTAFSLVISHVGATIVMVPIAVNLALAANGNPTAFAL IVALSASNNLMTASNPVISMVAGPANYQPRELWRVGAPLSLIYIVVMVSMINLMFWWAAR >Mature_620_residues MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSGNAVMSIIATTILGAGLERTG ALNRLATWLLRRSHGSEQRLMMMTLAISGLNSSFMQNPSVMALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVG NSPLILLNDLLVSANNNLPSGMASIEPLTMFAPLPIGVALLIAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY GIDGDVFELTVTAESPLVGMTLGEAEALHDAPLLLALKTGNDTRLAPPADMRIWVGSVLGAMGPRQEVADFAQNQFLRMS SRLRNLGDLFNPSLAGISEALIPPNSRLIGKSAGELRLRKQAGISLLAINRDKQVIREDVRNVPLRAGDMLVFHSIWQDL VQAAESRDFVPVTDFPKGEQRPHKFKIAMAIFAFTILIALTSRLPVALTLMTGVACMLVSGVLRMDEAYASINWKTIFMM AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGIPVWALEISLALLTTAFSLVISHVGATIVMVPIAVNLALAANGNPTAFAL IVALSASNNLMTASNPVISMVAGPANYQPRELWRVGAPLSLIYIVVMVSMINLMFWWAAR
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 RCK C-terminal domains [H]
Homologues:
Organism=Escherichia coli, GI1788629, Length=638, Percent_Identity=26.8025078369906, Blast_Score=184, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001898 - InterPro: IPR006037 [H]
Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 66781; Mature: 66781
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSG CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC NAVMSIIATTILGAGLERTGALNRLATWLLRRSHGSEQRLMMMTLAISGLNSSFMQNPSV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCE MALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVGNSPLILLNDLLVSANNNLPS EEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCC GMASIEPLTMFAPLPIGVALLIAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY CCCCCCCHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHC GIDGDVFELTVTAESPLVGMTLGEAEALHDAPLLLALKTGNDTRLAPPADMRIWVGSVLG CCCCCEEEEEEECCCCEEEEECCCHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH AMGPRQEVADFAQNQFLRMSSRLRNLGDLFNPSLAGISEALIPPNSRLIGKSAGELRLRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEECCCCCCEEEHH QAGISLLAINRDKQVIREDVRNVPLRAGDMLVFHSIWQDLVQAAESRDFVPVTDFPKGEQ HCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPHKFKIAMAIFAFTILIALTSRLPVALTLMTGVACMLVSGVLRMDEAYASINWKTIFMM CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGIPVWALEISLALLTTAFSLVISHVGATIVM HHHHHHCEEECCCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHEEE VPIAVNLALAANGNPTAFALIVALSASNNLMTASNPVISMVAGPANYQPRELWRVGAPLS EEHHEEEEEECCCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHHCCCCHH LIYIVVMVSMINLMFWWAAR HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTALTLTNDMKLVLGLVGFTMAMFLFERIRADVVALIVLVVLGVTGLVAPEELFGGFSG CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCC NAVMSIIATTILGAGLERTGALNRLATWLLRRSHGSEQRLMMMTLAISGLNSSFMQNPSV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCE MALYLPVASRLAARTGLTLQRMLLPIAAAIVMGGALTMVGNSPLILLNDLLVSANNNLPS EEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEHHHHCCCCCCCC GMASIEPLTMFAPLPIGVALLIAALLYFRFYGDRKLIEEERLINEGVTPSRTESYFAKTY CCCCCCCHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHC GIDGDVFELTVTAESPLVGMTLGEAEALHDAPLLLALKTGNDTRLAPPADMRIWVGSVLG CCCCCEEEEEEECCCCEEEEECCCHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH AMGPRQEVADFAQNQFLRMSSRLRNLGDLFNPSLAGISEALIPPNSRLIGKSAGELRLRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHCCCCCCCEECCCCCCEEEHH QAGISLLAINRDKQVIREDVRNVPLRAGDMLVFHSIWQDLVQAAESRDFVPVTDFPKGEQ HCCEEEEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPHKFKIAMAIFAFTILIALTSRLPVALTLMTGVACMLVSGVLRMDEAYASINWKTIFMM CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH AGLIPLGWAMDSSGTAAWVAGHTIDRLPEGIPVWALEISLALLTTAFSLVISHVGATIVM HHHHHHCEEECCCCCEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHEEE VPIAVNLALAANGNPTAFALIVALSASNNLMTASNPVISMVAGPANYQPRELWRVGAPLS EEHHEEEEEECCCCCCEEEEEEEEECCCCEEECCCCEEEEEECCCCCCHHHHHHCCCCHH LIYIVVMVSMINLMFWWAAR HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]