| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is thiG
Identifier: 21244027
GI number: 21244027
Start: 3880131
End: 3880925
Strand: Direct
Name: thiG
Synonym: XAC3302
Alternate gene names: 21244027
Gene position: 3880131-3880925 (Clockwise)
Preceding gene: 21244026
Following gene: 21244028
Centisome position: 74.97
GC content: 65.79
Gene sequence:
>795_bases ATGACGAATCCCGCCCCCTCTGATGCGCTGGTCATCGCCGGCAAACACTACCGTTCGCGCCTGCTCACCGGCACCGGCAA GTTCAAGGATCTGGACGAAACCCGCCTGGCCACCGAAGCCGCCGCGGCCGAAATCGTCACTGTCGCCATTCGCCGGGTGA ATATTGGCCAGGACCCCAACGCACCCAGCCTGCTGGATGTGCTGCCGCCGGAGCGCTACACGCTGCTGCCCAACACCGCC GGCTGCTACACCGCCGAGGACGCGGTGCGCACGTGCCGGCTGGCGCGCGAACTGCTGGACGGCCACAACCTCACCAAGCT GGAAGTGCTCGGCGACGAGAAGACGCTGTACCCGGATGTGGTGCAGACGCTCAAGGCCGCCGAACAACTGGTCGCCGATG GTTTCGAGGTGATGGTCTACACCTCCGACGACCCGATCCTGGCCAAGCGCCTGGAAGACATCGGCTGCGTGGCGGTGATG CCGCTAGCCGCGCCGATCGGCTCGGGGCTGGGCATCCAGAACAAGTACAACCTGCTGGAAATCATCGAGAACGCCAAGGT GCCGATCATCGTGGATGCCGGGGTGGGCACCGCCTCGGATGCGGCGATTGCCATGGAGCTGGGCTGCGATGGCGTGCTGA TGAATACCGCCATTGCCGGTGCGCGCGACCCGATCCTGATGGCCAGCGCGATGCGCAAGGCGATCGAGGCCGGACGCGAG GCGTTCCTGGCCGGGCGGATTCCACGCAAGCGCTATGCATCGGCGTCGAGCCCGGTGGATGGTGTGATTGGATGA
Upstream 100 bases:
>100_bases TTACGCGAGGGCGATGTGGTGGAAATCGTGCACGCGCTGGGCGGCGGCTGATGCGTCGCGCAGGCCGGCGCATCAGCGCC CGATCGGTGATAATTGCCGC
Downstream 100 bases:
>100_bases TGGGGCGGTCTGCGTTGACATTGCGGCCGAGGCGCAATGATTGGCAGTGCGGCGTGCGGAATATGACCGCTGCCAGATCG CGCGTTGCTACGAGCGCCCC
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTNPAPSDALVIAGKHYRSRLLTGTGKFKDLDETRLATEAAAAEIVTVAIRRVNIGQDPNAPSLLDVLPPERYTLLPNTA GCYTAEDAVRTCRLARELLDGHNLTKLEVLGDEKTLYPDVVQTLKAAEQLVADGFEVMVYTSDDPILAKRLEDIGCVAVM PLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGRE AFLAGRIPRKRYASASSPVDGVIG
Sequences:
>Translated_264_residues MTNPAPSDALVIAGKHYRSRLLTGTGKFKDLDETRLATEAAAAEIVTVAIRRVNIGQDPNAPSLLDVLPPERYTLLPNTA GCYTAEDAVRTCRLARELLDGHNLTKLEVLGDEKTLYPDVVQTLKAAEQLVADGFEVMVYTSDDPILAKRLEDIGCVAVM PLAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGRE AFLAGRIPRKRYASASSPVDGVIG >Mature_263_residues TNPAPSDALVIAGKHYRSRLLTGTGKFKDLDETRLATEAAAAEIVTVAIRRVNIGQDPNAPSLLDVLPPERYTLLPNTAG CYTAEDAVRTCRLARELLDGHNLTKLEVLGDEKTLYPDVVQTLKAAEQLVADGFEVMVYTSDDPILAKRLEDIGCVAVMP LAAPIGSGLGIQNKYNLLEIIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGREA FLAGRIPRKRYASASSPVDGVIG
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family
Homologues:
Organism=Escherichia coli, GI48994993, Length=254, Percent_Identity=48.8188976377953, Blast_Score=218, Evalue=4e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIG_XANAC (Q8PHF5)
Other databases:
- EMBL: AE008923 - RefSeq: NP_643609.1 - ProteinModelPortal: Q8PHF5 - SMR: Q8PHF5 - GeneID: 1157373 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3302 - NMPDR: fig|190486.1.peg.3253 - HOGENOM: HBG296821 - OMA: VAIRRTN - ProtClustDB: PRK00208 - BioCyc: XAXO190486:XAC3302-MONOMER - GO: GO:0005737 - HAMAP: MF_00443 - InterPro: IPR013785 - InterPro: IPR008867 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF05690 ThiG; SSF110399 ThiG
EC number: NA
Molecular weight: Translated: 27939; Mature: 27807
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: ACT_SITE 106-106 BINDING 167-167
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPAPSDALVIAGKHYRSRLLTGTGKFKDLDETRLATEAAAAEIVTVAIRRVNIGQDPN CCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APSLLDVLPPERYTLLPNTAGCYTAEDAVRTCRLARELLDGHNLTKLEVLGDEKTLYPDV CCCCEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH VQTLKAAEQLVADGFEVMVYTSDDPILAKRLEDIGCVAVMPLAAPIGSGLGIQNKYNLLE HHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEEHHHHHHCCCCCCCCCCHHHHH IIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGRE HHHCCCCCEEEECCCCCCCCCEEEEEECCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHH AFLAGRIPRKRYASASSPVDGVIG HHHHCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure TNPAPSDALVIAGKHYRSRLLTGTGKFKDLDETRLATEAAAAEIVTVAIRRVNIGQDPN CCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC APSLLDVLPPERYTLLPNTAGCYTAEDAVRTCRLARELLDGHNLTKLEVLGDEKTLYPDV CCCCEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH VQTLKAAEQLVADGFEVMVYTSDDPILAKRLEDIGCVAVMPLAAPIGSGLGIQNKYNLLE HHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHCCCEEEHHHHHHCCCCCCCCCCHHHHH IIENAKVPIIVDAGVGTASDAAIAMELGCDGVLMNTAIAGARDPILMASAMRKAIEAGRE HHHCCCCCEEEECCCCCCCCCEEEEEECCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHH AFLAGRIPRKRYASASSPVDGVIG HHHHCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217