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The map label for this gene is comL [C]

Identifier: 21243944

GI number: 21243944

Start: 3791692

End: 3792573

Strand: Direct

Name: comL [C]

Synonym: XAC3218

Alternate gene names: 21243944

Gene position: 3791692-3792573 (Clockwise)

Preceding gene: 21243939

Following gene: 21243945

Centisome position: 73.26

GC content: 64.06

Gene sequence:

>882_bases
ATGATCCGACGGTCCACGTTTTCCGCGCCTGCGCGCCTGATTGCCCTCATGCTGGTCATGGCGTTCGTCGTCACCGGCTG
CCACCGCGGCGCCAAGGACAAGAATCCCGACGAGGGCATGCCGGTCGAGCAGCTCTACGGCAAGGGTCATAACCTGATGG
AGAAAGGCAACTGGGCCGGCGCCGAAGCCAGCTACAAGCGCCTGATCGCCCAGTACCCCTATGGCCCGTACACCGAGCAG
GCGATGATCGAAACCGCCTACGCCCAGTACAAGGCCGGCAAGCACGACGACGCCGTCTCCAGCGTCGACCGCTTCATCCG
TACCTACCCGACCCACCGCAACATCTCCTATCTGTACTACCTGCGCGGGCTGGCCAACAGCAACCGCGACACGGTGTTCC
TGCGCCGCGTATGGTCGCTGGACCCGAGCCGCCGCGACCTGTCTTCGCCGCAGCAGGCCTACAACGATTTCAATACCGTC
ACCGATCGCTACCCGAACAGCCGTTACGCCGCCGACGCACGCAAGCGCATGATCGAGTTGCGCGACATCTTCGCCCAGCA
TGAATTGGACAACGCGCTGTACTACCTGCGCCGCGATGCCTGGGTGTCGGCCGCCGGTCGTGCCAACTACCTGCTCGAAA
CCTATCCGCAGAGCGCCTTCCAGTACGACGCGGTCGCGGTGCTGGCAGAGGCCTACACGCACCTGGGCAACAAGACCTTG
GCAGCCGACGCACGCCGCGTGCTGGAGCTCAACGACCCGCAGCACCCGTGGCTGACCGGCAACTGGCCGAAATACCCGTG
GGCCATCCGCAAGCTCAACCCGTTTGCCGGCGAAAAATCCGCCGCGACCGGGCAAAGCAATTCGCAGATGAATCGCGACT
GA

Upstream 100 bases:

>100_bases
AAGCGGGAATTTGGGGGTCCGGGCGGCGGGAGTCAGTCGCCGGACAGGCCACTAGGCTATCATCGCGCTCTCGTTTTCCT
GATGCGTCCTGCCCAGACCC

Downstream 100 bases:

>100_bases
GATATCAGGCGCAGCGCATGACCGAAGAGAGGCCGCAAGGCCTCTTTTTTGTTGCGGCGACGATGACGGCAGCACGGCAA
GTGCAGTACCGACGACGACA

Product: competence lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHNLMEKGNWAGAEASYKRLIAQYPYGPYTEQ
AMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTV
TDRYPNSRYAADARKRMIELRDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
AADARRVLELNDPQHPWLTGNWPKYPWAIRKLNPFAGEKSAATGQSNSQMNRD

Sequences:

>Translated_293_residues
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHNLMEKGNWAGAEASYKRLIAQYPYGPYTEQ
AMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTV
TDRYPNSRYAADARKRMIELRDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
AADARRVLELNDPQHPWLTGNWPKYPWAIRKLNPFAGEKSAATGQSNSQMNRD
>Mature_293_residues
MIRRSTFSAPARLIALMLVMAFVVTGCHRGAKDKNPDEGMPVEQLYGKGHNLMEKGNWAGAEASYKRLIAQYPYGPYTEQ
AMIETAYAQYKAGKHDDAVSSVDRFIRTYPTHRNISYLYYLRGLANSNRDTVFLRRVWSLDPSRRDLSSPQQAYNDFNTV
TDRYPNSRYAADARKRMIELRDIFAQHELDNALYYLRRDAWVSAAGRANYLLETYPQSAFQYDAVAVLAEAYTHLGNKTL
AADARRVLELNDPQHPWLTGNWPKYPWAIRKLNPFAGEKSAATGQSNSQMNRD

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=233, Percent_Identity=33.9055793991416, Blast_Score=149, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33524; Mature: 33524

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]