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The map label for this gene is mcp1 [H]

Identifier: 21243939

GI number: 21243939

Start: 3786751

End: 3788661

Strand: Direct

Name: mcp1 [H]

Synonym: XAC3213

Alternate gene names: 21243939

Gene position: 3786751-3788661 (Clockwise)

Preceding gene: 21243938

Following gene: 21243944

Centisome position: 73.17

GC content: 67.19

Gene sequence:

>1911_bases
ATGCCGCTCCCCCTTCTCAGATCACCCAGCTGGACTCAGCCTATGTCGCTTGCACACGATGCCGCCCCCGTCGTCCAACC
GCCCGCCGGTCGGCACGTTGCGCGCGCCACCTGGACTGCATGGCTGCCCGCTGCTGCGCATATCGGGGTGCTGGCATTGC
TCGCCTGCTACGCCGCCACGCTGGTACCCGGCGGCTTCCTGAGCGGGCTCGGACGCCTGCTGCCCGCCCTGTTGGTGCTG
GGCGCGGCAAGCGCCGGGCTCTGGTGGTGGTCGCGCCGTCGTCACGACACGCAGTTGCAGCAGGCAATGCGTGCGGTGGT
GGCGATCGGCGACGGACGCACCCAGCGTCTGGACCTGCGCAACGCCTCCGGCGACCTCGCACCGTTGCTGCACGCGCTGC
AGGATGCCCAGGACAAGCTCGCCATCCGCATCGATGTGATGGAGCAAGGCCTGCGCCATGGCCAGTTCGTGATCAAGGCG
CTGGACGATCTGGACACCATGATCCGCATCGCCGACGACGATGGCCAGGTGCTGTTCGCCAACCGCAAATTGCTCGCCAT
GCTCAAGCTGATCGAGCCGGATGTGCAGAGCTTCCGTCCCAGCTTCCATGCCGAAGGCTTCGTCGGCGGCAGCATCGGCG
ACATCTATCCCGACAGCCAGGCCGCGATCGACCGCATGCGCGCGTTGAATGCCTCCAAGGCCGTGCGTGCGCCGTTCTTC
GGCCGCCAGATCGACTTCGTCTACAGCCCGATCATCGCCGCCGACGGCACCAAGCTCGGCACCATCGCGCAGTGGATGGA
CGTCACCGCGCAGGTCAACGCCGAGCAGGCACTGATCCAGATCATCGACGCCGCCTCCGCCGGCGATTTCAGCCGCCGCA
TGCAGATCGACGGCATGGACGGTGTGCTGCTGACCCTGGCGCAAGGCATCAACCGCATCTACGACTCGGTGGAAACCCAT
CTGGCCGCATTGGCGCGCGTGATCGGTGCACTGGCCGAAGGCGACCTCACCCAGCGCGTGGACGGCGATGCGCACGGTAT
CTTCGCGCGCTTGCGCGACGACACCAACCAGACCGTTACCCGCCTCACCGAGATCATCGGCGGCATCCAGGCCGCATCGG
ACACCATCCGCCAGGCCGCGGTGGAAATCGCCGCCGGCAACATGGATCTTTCCGAGCGCACCGAGCAACAGGCGGCCAAT
CTGGAAGAAACCGCAAGCTCGATGGAAGAGCTCACCTCCACCGTGAAGCAGAACGCCGAGAGCGCGCTGCAGGCCAATCG
CCTGGTCGTCGGCACCGGCGACGTGGCGCAGAGCGGCGGGCAGGTGATGGACGAGGTGGTCGCCACCATGGGCCAGATCA
GCACCGCCTCGCGCAAGATCGGCGAGATCATCGGTGTGATCGACGGCATCGCGTTCCAGACCAACATCCTGGCGCTCAAC
GCCGCGGTGGAAGCCGCGCGTGCCGGCGAACAGGGCCGCGGCTTTGCGGTGGTTGCCTCGGAAGTGCGCGCACTGGCGCG
GCGCTCTGCCGATGCGGCCAAGGAGATCAAGACGCTCATCGCCGACTCCACCGACAAGGTGGAGCTGGGTTCGGGCCTGG
TGCACCGCGCCGGCGCGACCATGCGCGAGATCGTCGGCTCGGTCAAACACGTCACCGACATCATGAGCGAGATCACCTCG
GCCAGCGCCGAGCAGTCCAGCGGGATCGAGCAGGTCAACCGCACGGTCGCGCAGTTGGATGAAGTGACCCAACGCAACGC
CGCGCTGGTGGAAGAAGCCACCGCCGCCGCGCGCAGCCTGGAAGAACAGGCGGTGGAACTGGCCGATGCGGTCTCGATCT
TCCGCCTGCAGTCCGACGCCCGCCCCGGCGCCTCCAACATCGCGCGCGCCAGCTTCCACAACGCGGCATAA

Upstream 100 bases:

>100_bases
ATTTCGCGACCTGGTTGCCATATTCCGACGAACGGCGTCTTCACATCATCATGATTCGGACTCAGCCGCCGATACCCCAA
TTGCAGGCCATGGACTGCCG

Downstream 100 bases:

>100_bases
GCCCGGCATGCGTAGCCATTCGTAGGAGCGCGCCCGGGCGCGACCGGGCGTTCCCCGGAATGCTCCTTGCGCTCAGGCGC
GCTCCTACGCGCCATTGGTC

Product: chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 636; Mature: 635

Protein sequence:

>636_residues
MPLPLLRSPSWTQPMSLAHDAAPVVQPPAGRHVARATWTAWLPAAAHIGVLALLACYAATLVPGGFLSGLGRLLPALLVL
GAASAGLWWWSRRRHDTQLQQAMRAVVAIGDGRTQRLDLRNASGDLAPLLHALQDAQDKLAIRIDVMEQGLRHGQFVIKA
LDDLDTMIRIADDDGQVLFANRKLLAMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALNASKAVRAPFF
GRQIDFVYSPIIAADGTKLGTIAQWMDVTAQVNAEQALIQIIDAASAGDFSRRMQIDGMDGVLLTLAQGINRIYDSVETH
LAALARVIGALAEGDLTQRVDGDAHGIFARLRDDTNQTVTRLTEIIGGIQAASDTIRQAAVEIAAGNMDLSERTEQQAAN
LEETASSMEELTSTVKQNAESALQANRLVVGTGDVAQSGGQVMDEVVATMGQISTASRKIGEIIGVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRALARRSADAAKEIKTLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDIMSEITS
ASAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIFRLQSDARPGASNIARASFHNAA

Sequences:

>Translated_636_residues
MPLPLLRSPSWTQPMSLAHDAAPVVQPPAGRHVARATWTAWLPAAAHIGVLALLACYAATLVPGGFLSGLGRLLPALLVL
GAASAGLWWWSRRRHDTQLQQAMRAVVAIGDGRTQRLDLRNASGDLAPLLHALQDAQDKLAIRIDVMEQGLRHGQFVIKA
LDDLDTMIRIADDDGQVLFANRKLLAMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALNASKAVRAPFF
GRQIDFVYSPIIAADGTKLGTIAQWMDVTAQVNAEQALIQIIDAASAGDFSRRMQIDGMDGVLLTLAQGINRIYDSVETH
LAALARVIGALAEGDLTQRVDGDAHGIFARLRDDTNQTVTRLTEIIGGIQAASDTIRQAAVEIAAGNMDLSERTEQQAAN
LEETASSMEELTSTVKQNAESALQANRLVVGTGDVAQSGGQVMDEVVATMGQISTASRKIGEIIGVIDGIAFQTNILALN
AAVEAARAGEQGRGFAVVASEVRALARRSADAAKEIKTLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDIMSEITS
ASAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIFRLQSDARPGASNIARASFHNAA
>Mature_635_residues
PLPLLRSPSWTQPMSLAHDAAPVVQPPAGRHVARATWTAWLPAAAHIGVLALLACYAATLVPGGFLSGLGRLLPALLVLG
AASAGLWWWSRRRHDTQLQQAMRAVVAIGDGRTQRLDLRNASGDLAPLLHALQDAQDKLAIRIDVMEQGLRHGQFVIKAL
DDLDTMIRIADDDGQVLFANRKLLAMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALNASKAVRAPFFG
RQIDFVYSPIIAADGTKLGTIAQWMDVTAQVNAEQALIQIIDAASAGDFSRRMQIDGMDGVLLTLAQGINRIYDSVETHL
AALARVIGALAEGDLTQRVDGDAHGIFARLRDDTNQTVTRLTEIIGGIQAASDTIRQAAVEIAAGNMDLSERTEQQAANL
EETASSMEELTSTVKQNAESALQANRLVVGTGDVAQSGGQVMDEVVATMGQISTASRKIGEIIGVIDGIAFQTNILALNA
AVEAARAGEQGRGFAVVASEVRALARRSADAAKEIKTLIADSTDKVELGSGLVHRAGATMREIVGSVKHVTDIMSEITSA
SAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSLEEQAVELADAVSIFRLQSDARPGASNIARASFHNAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=321, Percent_Identity=56.386292834891, Blast_Score=286, Evalue=2e-78,
Organism=Escherichia coli, GI1787690, Length=293, Percent_Identity=55.2901023890785, Blast_Score=278, Evalue=7e-76,
Organism=Escherichia coli, GI1788195, Length=316, Percent_Identity=55.379746835443, Blast_Score=278, Evalue=9e-76,
Organism=Escherichia coli, GI1788194, Length=294, Percent_Identity=54.7619047619048, Blast_Score=266, Evalue=3e-72,
Organism=Escherichia coli, GI1789453, Length=251, Percent_Identity=43.8247011952191, Blast_Score=209, Evalue=5e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 67588; Mature: 67457

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50885 HAMP ; PS00436 PEROXIDASE_2 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPLLRSPSWTQPMSLAHDAAPVVQPPAGRHVARATWTAWLPAAAHIGVLALLACYAAT
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPGGFLSGLGRLLPALLVLGAASAGLWWWSRRRHDTQLQQAMRAVVAIGDGRTQRLDLR
HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECC
NASGDLAPLLHALQDAQDKLAIRIDVMEQGLRHGQFVIKALDDLDTMIRIADDDGQVLFA
CCCCCHHHHHHHHHCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEE
NRKLLAMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALNASKAVRAPFF
CHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCCCC
GRQIDFVYSPIIAADGTKLGTIAQWMDVTAQVNAEQALIQIIDAASAGDFSRRMQIDGMD
CCHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCEECCCCC
GVLLTLAQGINRIYDSVETHLAALARVIGALAEGDLTQRVDGDAHGIFARLRDDTNQTVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCHHHHH
RLTEIIGGIQAASDTIRQAAVEIAAGNMDLSERTEQQAANLEETASSMEELTSTVKQNAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALQANRLVVGTGDVAQSGGQVMDEVVATMGQISTASRKIGEIIGVIDGIAFQTNILALN
HHHHHCCEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVEAARAGEQGRGFAVVASEVRALARRSADAAKEIKTLIADSTDKVELGSGLVHRAGAT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCH
MREIVGSVKHVTDIMSEITSASAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQAVELADAVSIFRLQSDARPGASNIARASFHNAA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PLPLLRSPSWTQPMSLAHDAAPVVQPPAGRHVARATWTAWLPAAAHIGVLALLACYAAT
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVPGGFLSGLGRLLPALLVLGAASAGLWWWSRRRHDTQLQQAMRAVVAIGDGRTQRLDLR
HCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEECC
NASGDLAPLLHALQDAQDKLAIRIDVMEQGLRHGQFVIKALDDLDTMIRIADDDGQVLFA
CCCCCHHHHHHHHHCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEE
NRKLLAMLKLIEPDVQSFRPSFHAEGFVGGSIGDIYPDSQAAIDRMRALNASKAVRAPFF
CHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCCCC
GRQIDFVYSPIIAADGTKLGTIAQWMDVTAQVNAEQALIQIIDAASAGDFSRRMQIDGMD
CCHHHHHHCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHCEECCCCC
GVLLTLAQGINRIYDSVETHLAALARVIGALAEGDLTQRVDGDAHGIFARLRDDTNQTVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCHHHHH
RLTEIIGGIQAASDTIRQAAVEIAAGNMDLSERTEQQAANLEETASSMEELTSTVKQNAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALQANRLVVGTGDVAQSGGQVMDEVVATMGQISTASRKIGEIIGVIDGIAFQTNILALN
HHHHHCCEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVEAARAGEQGRGFAVVASEVRALARRSADAAKEIKTLIADSTDKVELGSGLVHRAGAT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCEECCCCHHHHCCCH
MREIVGSVKHVTDIMSEITSASAEQSSGIEQVNRTVAQLDEVTQRNAALVEEATAAARSL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEQAVELADAVSIFRLQSDARPGASNIARASFHNAA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]