| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243909
Identifier: 21243909
GI number: 21243909
Start: 3746178
End: 3747353
Strand: Reverse
Name: 21243909
Synonym: XAC3183
Alternate gene names: NA
Gene position: 3747353-3746178 (Counterclockwise)
Preceding gene: 21243910
Following gene: 21243900
Centisome position: 72.4
GC content: 56.46
Gene sequence:
>1176_bases ATGACACGACAAATCACAAAACTCGTAATCGGTGCGGGCATGATGGTCATCGCAACGCAAGTCGGGGCCAGCGAGTTTCT GATCGATATGCAAGGTGCAGCCGGAAATCGTGTCAACGTCTACGCCAGTGACGCAATTATGGACCACACACCGATCAATG ATGATCTCGCAAATCCTGACTCAAACCGGGTCATTCAGATTGATTTGACGATGGTCTATGAAGCGGTCGACCAACCCCTA TGGTTGGAATATCAACTTCAGTTCAAATGCCCCAAGTCGATTCGGCGCGGCCGTGGCGCACCCAAGCACAAGGCTGATTC AACCGGCATGTTGGACACGCCGGATTCCGTGGAATTCCGGGTGGCCAGTGGCGCAAAGACCATGAAACAGGATCCGGCGA TCATTGATCTCCAGCCCACCGTTTGGCAAAGCACGACCAGCTACACGATGCGACAGGCATGGAATGTAGCCTGCAACAGT GCCAGCATTGGCGATGCCAAACAAGCTGCGGCGGTCGATCGTGTGGTTAAGTCCGATGCATTGCGAGCGAAACTGGCAGC CATTGGCTTGAATGGACTGGAACTGGTCCCCGCCGGACTGTCGATGAGTTCGCTTGCCGATTTTACCTGGGAAACGCTGT GGTCTGACGTGCCGAAGCCCGCGATCAATCGCGGCCGCAAGCTGACGCCAGCAGAATCGGCAGCGCTCACGGCAAAATTG ACCCAAATGCAGCAACAAGTAACCGAAGCGCAGGGAAAGTTGCAGGGCAAGGTGGCGACGATGGACGCCAATCTGGATTT TATTCGGGCCGCCGCTGAATACCGTGGAAAAAGGCGTTTATCGCGTAGTGAATCGCTCCTGATCCAGGTGTGGGCGGGTA AGACCGAGCAAGAGGTCGTCGCCGCGAACGGCAACCCCGCTGTCCGTCAGGCCGGGATCGCGCGGACGCTCTCTTATGGG CAGGCCTTTGACAATCGCGTCATGTGGCAGAATCTTGTGACCGGCGCGACTTACACTGGCGGCGGTTATAAAAGTTGCAA CGTCCGCTATGTGCTGATCCCGGACAGCGCCGGGATGCTGAGGGTTGCCGATGTGAATATCTTCGTTGACACAAGTGGCG ACACAAGCGGGATGGGTCGCGCCTGCACCGACATCTTGAACGTGCCAAACGGCTGA
Upstream 100 bases:
>100_bases AAGCTTCAAAATTGCGTACTCAAATTTTGAGAACGTCTTGATATCAGTAACATACGTGCGCGGTAGAGCGCGAGTTTGTA GAACGGGTGAGGAAGCGCTC
Downstream 100 bases:
>100_bases AATCATGGTCTATTTTCGAGCCGCGCTCATGCAAGCCGAAAGCTGGCGATACGCCAGCTGCAACTGGACAACTTTTGACC GGAACACCTCTTTCCCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MTRQITKLVIGAGMMVIATQVGASEFLIDMQGAAGNRVNVYASDAIMDHTPINDDLANPDSNRVIQIDLTMVYEAVDQPL WLEYQLQFKCPKSIRRGRGAPKHKADSTGMLDTPDSVEFRVASGAKTMKQDPAIIDLQPTVWQSTTSYTMRQAWNVACNS ASIGDAKQAAAVDRVVKSDALRAKLAAIGLNGLELVPAGLSMSSLADFTWETLWSDVPKPAINRGRKLTPAESAALTAKL TQMQQQVTEAQGKLQGKVATMDANLDFIRAAAEYRGKRRLSRSESLLIQVWAGKTEQEVVAANGNPAVRQAGIARTLSYG QAFDNRVMWQNLVTGATYTGGGYKSCNVRYVLIPDSAGMLRVADVNIFVDTSGDTSGMGRACTDILNVPNG
Sequences:
>Translated_391_residues MTRQITKLVIGAGMMVIATQVGASEFLIDMQGAAGNRVNVYASDAIMDHTPINDDLANPDSNRVIQIDLTMVYEAVDQPL WLEYQLQFKCPKSIRRGRGAPKHKADSTGMLDTPDSVEFRVASGAKTMKQDPAIIDLQPTVWQSTTSYTMRQAWNVACNS ASIGDAKQAAAVDRVVKSDALRAKLAAIGLNGLELVPAGLSMSSLADFTWETLWSDVPKPAINRGRKLTPAESAALTAKL TQMQQQVTEAQGKLQGKVATMDANLDFIRAAAEYRGKRRLSRSESLLIQVWAGKTEQEVVAANGNPAVRQAGIARTLSYG QAFDNRVMWQNLVTGATYTGGGYKSCNVRYVLIPDSAGMLRVADVNIFVDTSGDTSGMGRACTDILNVPNG >Mature_390_residues TRQITKLVIGAGMMVIATQVGASEFLIDMQGAAGNRVNVYASDAIMDHTPINDDLANPDSNRVIQIDLTMVYEAVDQPLW LEYQLQFKCPKSIRRGRGAPKHKADSTGMLDTPDSVEFRVASGAKTMKQDPAIIDLQPTVWQSTTSYTMRQAWNVACNSA SIGDAKQAAAVDRVVKSDALRAKLAAIGLNGLELVPAGLSMSSLADFTWETLWSDVPKPAINRGRKLTPAESAALTAKLT QMQQQVTEAQGKLQGKVATMDANLDFIRAAAEYRGKRRLSRSESLLIQVWAGKTEQEVVAANGNPAVRQAGIARTLSYGQ AFDNRVMWQNLVTGATYTGGGYKSCNVRYVLIPDSAGMLRVADVNIFVDTSGDTSGMGRACTDILNVPNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42207; Mature: 42075
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQITKLVIGAGMMVIATQVGASEFLIDMQGAAGNRVNVYASDAIMDHTPINDDLANPD CCHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCCCCCC SNRVIQIDLTMVYEAVDQPLWLEYQLQFKCPKSIRRGRGAPKHKADSTGMLDTPDSVEFR CCCEEEEEHHHHHHHHCCCEEEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCEEE VASGAKTMKQDPAIIDLQPTVWQSTTSYTMRQAWNVACNSASIGDAKQAAAVDRVVKSDA EECCCHHHHCCCCEEECCCHHHCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHH LRAKLAAIGLNGLELVPAGLSMSSLADFTWETLWSDVPKPAINRGRKLTPAESAALTAKL HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH TQMQQQVTEAQGKLQGKVATMDANLDFIRAAAEYRGKRRLSRSESLLIQVWAGKTEQEVV HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEE AANGNPAVRQAGIARTLSYGQAFDNRVMWQNLVTGATYTGGGYKSCNVRYVLIPDSAGML EECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCEE RVADVNIFVDTSGDTSGMGRACTDILNVPNG EEEEEEEEEECCCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure TRQITKLVIGAGMMVIATQVGASEFLIDMQGAAGNRVNVYASDAIMDHTPINDDLANPD CHHHHHHHHHCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCEECCCCCCCCCCCCC SNRVIQIDLTMVYEAVDQPLWLEYQLQFKCPKSIRRGRGAPKHKADSTGMLDTPDSVEFR CCCEEEEEHHHHHHHHCCCEEEEEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCEEE VASGAKTMKQDPAIIDLQPTVWQSTTSYTMRQAWNVACNSASIGDAKQAAAVDRVVKSDA EECCCHHHHCCCCEEECCCHHHCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHH LRAKLAAIGLNGLELVPAGLSMSSLADFTWETLWSDVPKPAINRGRKLTPAESAALTAKL HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH TQMQQQVTEAQGKLQGKVATMDANLDFIRAAAEYRGKRRLSRSESLLIQVWAGKTEQEVV HHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEE AANGNPAVRQAGIARTLSYGQAFDNRVMWQNLVTGATYTGGGYKSCNVRYVLIPDSAGML EECCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCEECCCCCCCCCEEEEEEECCCCEE RVADVNIFVDTSGDTSGMGRACTDILNVPNG EEEEEEEEEECCCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA