| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is exsF
Identifier: 21243862
GI number: 21243862
Start: 3687521
End: 3687880
Strand: Reverse
Name: exsF
Synonym: XAC3135
Alternate gene names: NA
Gene position: 3687880-3687521 (Counterclockwise)
Preceding gene: 21243863
Following gene: 21243860
Centisome position: 71.26
GC content: 61.67
Gene sequence:
>360_bases ATGACCATGCGCGTGCTCCTGGTCGAAGACGAATCGTTGGTGGCGATGCTCCTGGAGGATTGCCTGGCGGAACTGGGTTA CGAGGTGGCGGCAACCGTGGCCGACGTGGACGCCGCGCTGCAAGCGGTGCAGGCAGGCAACCTCGACCTGGCACTGCTGG ACATCAATCTTGGCGGCACCTTGTCGTTTCCGATTGCGGAAGAACTGGACGCGCGCGGTGTTCCGTATATCTTCGTGACC GGCTATGCCCAGGGCGGGATTCCCGAAAGGTACCGGCACCGGCACGGCCTGCAGAAACCCTTCCATTTTCGTGATCTGAA GCATGCGCTATCGCTTTTGCAGCACCGCAGCGCCGAGTGA
Upstream 100 bases:
>100_bases AGCACGACCTCGAGGGCGAAGTTGAGCTGTCCTTCGATCCGGCTGGCGTGTGTTTCCGTGTGTCCATCCCGTTGCCGCGC GAGCATATCGAGTCACGGCC
Downstream 100 bases:
>100_bases TCCAGCGCGGGTTTACTGCAGTTGAACGACATTAGTTGCGGGCGAGGAGTTCGATATTGCCGACCGCCACAGTGCCAGGG CGCGCATGGCACGGTCGGCA
Product: two-component system regulatory protein
Products: NA
Alternate protein names: Response Regulator Receiver; Two-Component Response Regulator; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator Protein; Two-Component System Regulatory Protein; Response Regulator; PAS/PAC Sensor Protein; Response Regulator Receiver/SARP Domain-Containing Protein; Response Regulator Receiver Modulated GAF Sensor Protein; Two-Component Receiver Domain-Containing Protein; Regulatory Protein; Phytochrome Protein; Crp/Fnr Family Transcriptional Regulator; CheY-Like Response Regulator; Two-Component System Response Regulator; Response Regulator Receiver And SARP Domain Protein; Signal Transduction Histidine Kinase; Bacteriophytochrome Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MTMRVLLVEDESLVAMLLEDCLAELGYEVAATVADVDAALQAVQAGNLDLALLDINLGGTLSFPIAEELDARGVPYIFVT GYAQGGIPERYRHRHGLQKPFHFRDLKHALSLLQHRSAE
Sequences:
>Translated_119_residues MTMRVLLVEDESLVAMLLEDCLAELGYEVAATVADVDAALQAVQAGNLDLALLDINLGGTLSFPIAEELDARGVPYIFVT GYAQGGIPERYRHRHGLQKPFHFRDLKHALSLLQHRSAE >Mature_118_residues TMRVLLVEDESLVAMLLEDCLAELGYEVAATVADVDAALQAVQAGNLDLALLDINLGGTLSFPIAEELDARGVPYIFVTG YAQGGIPERYRHRHGLQKPFHFRDLKHALSLLQHRSAE
Specific function: Unknown
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13072; Mature: 12941
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMRVLLVEDESLVAMLLEDCLAELGYEVAATVADVDAALQAVQAGNLDLALLDINLGGT CCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE LSFPIAEELDARGVPYIFVTGYAQGGIPERYRHRHGLQKPFHFRDLKHALSLLQHRSAE ECCCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TMRVLLVEDESLVAMLLEDCLAELGYEVAATVADVDAALQAVQAGNLDLALLDINLGGT CEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE LSFPIAEELDARGVPYIFVTGYAQGGIPERYRHRHGLQKPFHFRDLKHALSLLQHRSAE ECCCCHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA