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The map label for this gene is yggA [C]

Identifier: 21243860

GI number: 21243860

Start: 3685617

End: 3686243

Strand: Reverse

Name: yggA [C]

Synonym: XAC3133

Alternate gene names: 21243860

Gene position: 3686243-3685617 (Counterclockwise)

Preceding gene: 21243862

Following gene: 21243858

Centisome position: 71.22

GC content: 64.43

Gene sequence:

>627_bases
ATGATCGTTCAAGCAACAGTGGCCGGTTTCCTTGCCGGTGCCGGTCTCATCGTCGCGATCGGCGCGCAGAATGCGTTCGT
GCTGCGGCAGGGGCTCAAGCGCCAGCACGTGGGACTGGTGGTGACGATCTGTGCACTTGGAGATATCGCGCTGATCCTGC
TCGGCGTCGCCGGAATCGGCGTGTTGGCGCAGCAATGGTCGGGCCTGCTGCAGGTGTTGCGCTATGCGGGCGCTGCGTTT
CTGGCGGTGTATGGGGGGATGGCGGCACGCCGTGCCTGGCGCGGAGATGGCGCAATGTCGCCAGCGGAACAGGGCGAAGA
TCGCTGGCAACGCGCCATGCTCACCTGCCTGGCGTTTACCTTTCTCAACCCGCACGTCTATCTCGATACGATGCTCTTGC
TCGGCAGTCTGGCGACGCATTACCCCGGCGCGTTGCGCTGGGCATTTGCACTGGGTGCGTGTGTGGCCAGCGTGAGCTGG
TTCTCTGGCCTGGGCTATGGGGCCCGCCTGTTGCAGCCAGTGTTTCGGCATCCGCGTGCGTGGCGGATACTGGATGGACT
GATCGCGGTCTTCATGCTGCTGCTGTGCGTGCTGTTGCTGCTCCCCGAGCACGCGGAGCTGCGCTGA

Upstream 100 bases:

>100_bases
CTTTTGCCGACATTAGAAGTTCTAATGAGCATACAGATTATTTAGTTTTCCTAATCCGACGCGAGGACGCACGATTCACT
CCAGCCTCGGAGACAACACC

Downstream 100 bases:

>100_bases
TCGCTCTGTCCGGAGCGTTATGCAGTCATTGCGCAGCAACTACCGACATATCGGAGCCGGACATCCTGCTGTTTCAATCG
TGATCTGTTGCAGTCCATCC

Product: membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIVQATVAGFLAGAGLIVAIGAQNAFVLRQGLKRQHVGLVVTICALGDIALILLGVAGIGVLAQQWSGLLQVLRYAGAAF
LAVYGGMAARRAWRGDGAMSPAEQGEDRWQRAMLTCLAFTFLNPHVYLDTMLLLGSLATHYPGALRWAFALGACVASVSW
FSGLGYGARLLQPVFRHPRAWRILDGLIAVFMLLLCVLLLLPEHAELR

Sequences:

>Translated_208_residues
MIVQATVAGFLAGAGLIVAIGAQNAFVLRQGLKRQHVGLVVTICALGDIALILLGVAGIGVLAQQWSGLLQVLRYAGAAF
LAVYGGMAARRAWRGDGAMSPAEQGEDRWQRAMLTCLAFTFLNPHVYLDTMLLLGSLATHYPGALRWAFALGACVASVSW
FSGLGYGARLLQPVFRHPRAWRILDGLIAVFMLLLCVLLLLPEHAELR
>Mature_208_residues
MIVQATVAGFLAGAGLIVAIGAQNAFVLRQGLKRQHVGLVVTICALGDIALILLGVAGIGVLAQQWSGLLQVLRYAGAAF
LAVYGGMAARRAWRGDGAMSPAEQGEDRWQRAMLTCLAFTFLNPHVYLDTMLLLGSLATHYPGALRWAFALGACVASVSW
FSGLGYGARLLQPVFRHPRAWRILDGLIAVFMLLLCVLLLLPEHAELR

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=192, Percent_Identity=38.0208333333333, Blast_Score=107, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22324; Mature: 22324

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVQATVAGFLAGAGLIVAIGAQNAFVLRQGLKRQHVGLVVTICALGDIALILLGVAGIG
CEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAQQWSGLLQVLRYAGAAFLAVYGGMAARRAWRGDGAMSPAEQGEDRWQRAMLTCLAFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FLNPHVYLDTMLLLGSLATHYPGALRWAFALGACVASVSWFSGLGYGARLLQPVFRHPRA
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
WRILDGLIAVFMLLLCVLLLLPEHAELR
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIVQATVAGFLAGAGLIVAIGAQNAFVLRQGLKRQHVGLVVTICALGDIALILLGVAGIG
CEEHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLAQQWSGLLQVLRYAGAAFLAVYGGMAARRAWRGDGAMSPAEQGEDRWQRAMLTCLAFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FLNPHVYLDTMLLLGSLATHYPGALRWAFALGACVASVSWFSGLGYGARLLQPVFRHPRA
HHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCH
WRILDGLIAVFMLLLCVLLLLPEHAELR
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]