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The map label for this gene is yoaA [C]

Identifier: 21243834

GI number: 21243834

Start: 3649621

End: 3651645

Strand: Reverse

Name: yoaA [C]

Synonym: XAC3107

Alternate gene names: 21243834

Gene position: 3651645-3649621 (Counterclockwise)

Preceding gene: 21243835

Following gene: 21243833

Centisome position: 70.56

GC content: 68.1

Gene sequence:

>2025_bases
ATGTCCCAACTTGCCACTGCCAGCATCCAAGCGCTCAGCGAGGGCGGGGCGCTTGCGCGCCAGCTCGACGCGTTCGCGCC
ACGTGCTGCGCAGTTGCGCCTGACCGGGACGATCGCCGAGGCGTTCGAGCAGCGCGATGTATTGCTGGCAGAGGCCGGCA
CCGGCACCGGCAAGACCTACGCCTATCTGGTGCCGGCGTTGCTGTCCGGGCTCAAGACCATCGTTTCCACCGGCACGCGC
GCGCTGCAGGATCAGCTGTTCCATCGCGATCTACCGCGTGTGCGCGCCGCGCTGGGCGTGGGGCTGCGCAGTGCGTTGTT
GAAGGGGCGCGCCAACTACCTGTGCAAGTACCGCACCCAGCAGGCACGTGGCGAACCGCGCTTTGCCACGCCCGAACAGG
TCTCGCAGTTCCAGCGCATCGTGGCCTGGAGCGGGCGCACCCAGTTCGGCGACATGGCCGAGCTGGAAGCCTTGCCGGAC
GACTCGCCGCTGCTGCCGATGGTGACCTCCACCGTCGACAATTGCCTGGGCACCGACTGCCCGTTCTACAGCGAGTGCTT
CGTGGTGCAGGCGCGCCAGCGTGCGCAGGCGGCCGATCTGGTGGTGGTCAATCACCACCTGCTGCTGGCCGATCTGGCGC
TCAAACAGGAAGGTTTCGGCGAAATCCTGCCCGGTGCGCAGGCCTTCGTCATCGACGAAGCGCATCAGTTGCCCGAACTG
GCGGCCAATTTCTTCGGCGAGAGTTTCGGCATGCGGCCATGGCAGGAGTTGGCGCGCGATTGCATGGTCGAAGCGCGCCT
GGTTGCCGGCGCGCAGGCCAGCCTGCAGGCACCGATCCTGGCGCTGGATGAGGCCTTGCGCAGCCTACGCGCCGGAATGG
AAGGGCTGCCGCCACGCGGCACGCAATGGCGTGCGCTGGCCAAGCCGCAGGTGCGCGAAGGGTTCGATGCCGTGCTGTCG
TCGCTGGCACGGTTGGGCGAATCCCTGCTGCCATTGCGTGAGGCTTCACCGGGTTTCGACGGCTGCACGGCACGTGCGCA
AGAGGCGTTGAGCCGCCTGTCGCGCTGGCTGGGCGAAGATCTGCCGGTGGCCGATTTCGCGCAGGATCCGCCGGAAGAGA
CCGTCGACAACGATGTACTCTGGTACGAACTCAGCCCGCGCGGCTTCCGCTGTCAGCGCACGCCCCTGGATGTCTCCGGC
CCGCTGCGCGAACACCGCGAAAAGTCGCAGGCGGCCTGGGTATTCACCTCGGCCACGCTGGCGGTGGGCGGCGAGTTCGA
CCACATCGCGCAGCGGCTGGGCCTGAGCGATCCGGTGACCTTGCTGCAACCCAGCCCGTTCGATTGGGCGCGTCAGGCCT
TGTGCTACCTGCCGCCGAACCTGCCCGATCCGGCCGCACGCGGGTTCGGCACTGCCTTGATCGGCGCGCTGACGCCGGTG
CTGGAAGCCTCCAACGGCCGTGCGTTCTTGCTGTTCGCCTCGCACCGCGCGCTGCGCGAAGCGGCCGAAGCCTTGCGCGG
CGCGCCATGGCCGTTGTTCGTGCAGGGCGAGGCGCCGCGCGCGACCTTGCTGCAGCGGTTCCGCGATTCCGGCAATGGCG
TGCTGCTGGGCTCGGCCAGTTTCCGCGAGGGCGTGGACGTGGTGGGCGACGCCTTGAGCGTGGTGGTGATCGACAAGCTG
CCATTCGCCGCACCCGACGACCCGGTGTTCGAAGCGCGCCTGGATGCGATCCGTCGCGAGGGCGGCAACCCGTTCCGCGA
CGAACAACTGCCACAGGCGGTGATCGCGCTCAAGCAGGGCGTGGGCCGGCTGATCCGCAGCGAAACCGACCGTGGCGTGC
TGGTGCTGTGCGACCCGCGGCTGGTGAACAAGAGCTACGGCCGCACCTTCATGAAGTCGCTGCCGCCGTTTGCGCGCACG
CACGCCATTGCCGATGTGCAGGCGTTTTTTGGCGTTGAACCGGCGGTGGGCGACAATGGCGCGCTCGCGTTGCCGGTCGG
CGGCGACCGATCTTCTTCTTCCTGA

Upstream 100 bases:

>100_bases
GCAGCAGCGGGATGTGCGCAATCCATCAAGTGCAACCCAGGCAGCATCACCGCGCACGCGCTAGGCTGTCGTGCTTCCTG
TCCGTTTTTCGTTCGGTCCC

Downstream 100 bases:

>100_bases
TTGCGGCCCCGCCATGAACGTCCTCGCTTTCGAAACCTCCACCGAAGCCTGCTCCGTTGCGCTGCACGTGGATGGTCGCG
TGATCGAGCGCTTCGAACTG

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 673

Protein sequence:

>674_residues
MSQLATASIQALSEGGALARQLDAFAPRAAQLRLTGTIAEAFEQRDVLLAEAGTGTGKTYAYLVPALLSGLKTIVSTGTR
ALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQQARGEPRFATPEQVSQFQRIVAWSGRTQFGDMAELEALPD
DSPLLPMVTSTVDNCLGTDCPFYSECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRGTQWRALAKPQVREGFDAVLS
SLARLGESLLPLREASPGFDGCTARAQEALSRLSRWLGEDLPVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSG
PLREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGDALSVVVIDKL
PFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQGVGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFART
HAIADVQAFFGVEPAVGDNGALALPVGGDRSSSS

Sequences:

>Translated_674_residues
MSQLATASIQALSEGGALARQLDAFAPRAAQLRLTGTIAEAFEQRDVLLAEAGTGTGKTYAYLVPALLSGLKTIVSTGTR
ALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQQARGEPRFATPEQVSQFQRIVAWSGRTQFGDMAELEALPD
DSPLLPMVTSTVDNCLGTDCPFYSECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRGTQWRALAKPQVREGFDAVLS
SLARLGESLLPLREASPGFDGCTARAQEALSRLSRWLGEDLPVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSG
PLREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGDALSVVVIDKL
PFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQGVGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFART
HAIADVQAFFGVEPAVGDNGALALPVGGDRSSSS
>Mature_673_residues
SQLATASIQALSEGGALARQLDAFAPRAAQLRLTGTIAEAFEQRDVLLAEAGTGTGKTYAYLVPALLSGLKTIVSTGTRA
LQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQQARGEPRFATPEQVSQFQRIVAWSGRTQFGDMAELEALPDD
SPLLPMVTSTVDNCLGTDCPFYSECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPELA
ANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRGTQWRALAKPQVREGFDAVLSS
LARLGESLLPLREASPGFDGCTARAQEALSRLSRWLGEDLPVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSGP
LREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPVL
EASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGDALSVVVIDKLP
FAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQGVGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTH
AIADVQAFFGVEPAVGDNGALALPVGGDRSSSS

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=643, Percent_Identity=43.3903576982893, Blast_Score=500, Evalue=1e-142,
Organism=Escherichia coli, GI1787018, Length=717, Percent_Identity=27.7545327754533, Blast_Score=166, Evalue=6e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 72824; Mature: 72692

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLATASIQALSEGGALARQLDAFAPRAAQLRLTGTIAEAFEQRDVLLAEAGTGTGKTY
CCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCEEEEECCCCCCCHH
AYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARGEPRFATPEQVSQFQRIVAWSGRTQFGDMAELEALPDDSPLLPMVTSTVDNCLGTDC
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PFYSECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
CCHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
TQWRALAKPQVREGFDAVLSSLARLGESLLPLREASPGFDGCTARAQEALSRLSRWLGED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
LPVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSGPLREHREKSQAAWVFTSATL
CCCHHHCCCCCHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHEEEEEEEHE
AVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
EECCCHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSAS
HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCH
FREGVDVVGDALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG
HHHCHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFFGVEPAVGDNG
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
ALALPVGGDRSSSS
EEEEECCCCCCCCC
>Mature Secondary Structure 
SQLATASIQALSEGGALARQLDAFAPRAAQLRLTGTIAEAFEQRDVLLAEAGTGTGKTY
CCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCEEEEECCCCCCCHH
AYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARGEPRFATPEQVSQFQRIVAWSGRTQFGDMAELEALPDDSPLLPMVTSTVDNCLGTDC
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PFYSECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
CCHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
TQWRALAKPQVREGFDAVLSSLARLGESLLPLREASPGFDGCTARAQEALSRLSRWLGED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
LPVADFAQDPPEETVDNDVLWYELSPRGFRCQRTPLDVSGPLREHREKSQAAWVFTSATL
CCCHHHCCCCCHHHCCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHEEEEEEEHE
AVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
EECCCHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSAS
HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCH
FREGVDVVGDALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG
HHHCHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFFGVEPAVGDNG
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
ALALPVGGDRSSSS
EEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]