| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243835
Identifier: 21243835
GI number: 21243835
Start: 3651918
End: 3652538
Strand: Reverse
Name: 21243835
Synonym: XAC3108
Alternate gene names: NA
Gene position: 3652538-3651918 (Counterclockwise)
Preceding gene: 21243836
Following gene: 21243834
Centisome position: 70.57
GC content: 69.57
Gene sequence:
>621_bases GTGGCTGGCGCCGCTTCTTCGGTCTGGAAAAGAAGCCCGAAGACCCTGCCGCCGCACCTGCCGCGGCCCCACCCACGCGT TGATTGGAACGACCCCATGAACCGAATGCACCGTTTGCTCGCCCCGATCGGCGTCCTGGCCGCACTCACCGCCTGCGTCA GCGCACCACCCGCGCCGCCGCCGACCCCGGTGGACCCGACGACCCCGACCCAGCGGCTGTTGCTGATCGAACGCGAAGCC GGCGCGGACGACACCGAACTGTCGGTGCAGCCGCTGCGCGACCCGCAGGTGGATGATTTGCGCGAGACCGCCAAGAGCAA ACGCCAGGCCGGCGATCTGGCCGGCGCCGCTGCGGCCCTGGATCAGGCGCTGGGCTTGGTGTCGGGCGACCCGGCGATTC TGCAGGAACGTGCCGAAGTGTCCGTGCTGCAGGCCGACTGGCCAGCGGCCGAACGCCTCGCCAAGCAGGCGATCGACCTG GGGTCCAAGACCGGGCCGTTGTGCCGTCGGCACTGGGCGACCATCGAGCAATCGCGTCTGGCGCGTGGCGAAAAGGAAAA CGCCGCCTCTGCCAAGGCGCAGATTGCCGGTTGCACCGTGGCAGGCGTGAAGCGGTACTGA
Upstream 100 bases:
>100_bases GTCGGCTTCACGCCGGCCTACGCGCCGTGCGCGGGCAACGCGCCGTCGATCGAAGCCGCGCCCGGCGAAGCGGCCGCACC TGCCGAACAATCCAGCGGCG
Downstream 100 bases:
>100_bases GACCGGCGATCGAAGCGACTGCGCACCGCAAGGCGGGCGCGGTGGATGCCTTGGATGGCCGTGTCCTTCGTGCGCTTGGA ATGCCTGGAGCACTTCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MAGAASSVWKRSPKTLPPHLPRPHPRVDWNDPMNRMHRLLAPIGVLAALTACVSAPPAPPPTPVDPTTPTQRLLLIEREA GADDTELSVQPLRDPQVDDLRETAKSKRQAGDLAGAAAALDQALGLVSGDPAILQERAEVSVLQADWPAAERLAKQAIDL GSKTGPLCRRHWATIEQSRLARGEKENAASAKAQIAGCTVAGVKRY
Sequences:
>Translated_206_residues MAGAASSVWKRSPKTLPPHLPRPHPRVDWNDPMNRMHRLLAPIGVLAALTACVSAPPAPPPTPVDPTTPTQRLLLIEREA GADDTELSVQPLRDPQVDDLRETAKSKRQAGDLAGAAAALDQALGLVSGDPAILQERAEVSVLQADWPAAERLAKQAIDL GSKTGPLCRRHWATIEQSRLARGEKENAASAKAQIAGCTVAGVKRY >Mature_205_residues AGAASSVWKRSPKTLPPHLPRPHPRVDWNDPMNRMHRLLAPIGVLAALTACVSAPPAPPPTPVDPTTPTQRLLLIEREAG ADDTELSVQPLRDPQVDDLRETAKSKRQAGDLAGAAAALDQALGLVSGDPAILQERAEVSVLQADWPAAERLAKQAIDLG SKTGPLCRRHWATIEQSRLARGEKENAASAKAQIAGCTVAGVKRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21966; Mature: 21835
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAASSVWKRSPKTLPPHLPRPHPRVDWNDPMNRMHRLLAPIGVLAALTACVSAPPAPP CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTPVDPTTPTQRLLLIEREAGADDTELSVQPLRDPQVDDLRETAKSKRQAGDLAGAAAAL CCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DQALGLVSGDPAILQERAEVSVLQADWPAAERLAKQAIDLGSKTGPLCRRHWATIEQSRL HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ARGEKENAASAKAQIAGCTVAGVKRY HCCCCHHHHHHHHHHHCCHHHCCCCC >Mature Secondary Structure AGAASSVWKRSPKTLPPHLPRPHPRVDWNDPMNRMHRLLAPIGVLAALTACVSAPPAPP CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PTPVDPTTPTQRLLLIEREAGADDTELSVQPLRDPQVDDLRETAKSKRQAGDLAGAAAAL CCCCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DQALGLVSGDPAILQERAEVSVLQADWPAAERLAKQAIDLGSKTGPLCRRHWATIEQSRL HHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ARGEKENAASAKAQIAGCTVAGVKRY HCCCCHHHHHHHHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA