| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243810
Identifier: 21243810
GI number: 21243810
Start: 3617712
End: 3620054
Strand: Direct
Name: 21243810
Synonym: XAC3083
Alternate gene names: NA
Gene position: 3617712-3620054 (Clockwise)
Preceding gene: 21243809
Following gene: 21243811
Centisome position: 69.9
GC content: 65.98
Gene sequence:
>2343_bases ATGGCAACACGACGCGGTTTTCTCCAAGGCGCCATCGCCGCAGCCCTGTTCGGCAGCGTCGGCCTGCCCGGCCTGGCGCG CGCGCGCGCCGGCAACTACGCGCTACCGGCCGATGCGCGTACCCGCGCCGACCTCACCCGGCATGTGGATGTGTTCATCG GCACCGGCGGCCACGGCCATACCTTCCCCGGCGCCACGTTGCCGTTCGGCATGGTGCAGCTCAGCCCGGACACCTATAAC GCAGTGTGGGATTCGTGCTCGGGGTACCACGAGTCCGATGGCTCGATCATGGGCTTTTCGCACACGCACCTGTCCGGCAC CGGTATCGGCGACATGCTGGACTTCCTGCTGGTGCCCGTCACCGGCGAGGTCAAGTTGGTGCCCGGCCCGCTCGACAACC CGGACGCCGGCTACCGCTCGCGCTACGACCATGCCGATGAAGCCGCATCGCCGGGTTACTACCGCGTGCGCCTCAAGGAC AGCGGCGTGCATGCCGAACTCACCGCCACCGCGCGGGCAGGCCTGCACCGTTACCACTTTCCCAAGGGCAAACCCGCGCA TGTGTTGCTCGACCTGTGCCACGGCATGCAGGACAAACCCGGCATTCCCACCCGCATCAGCGATGCGCAGTTGCGCGTGG TCGACGAACGCACGCTCACCGGCGGACGCCGCGTGTACCAATGGGCCAAGGGCCGCTACATCTATTTCGCCATGCGCCTG TCGCGCCCCTTCAAACAGGTGCAGTTGTACGACGAAGACCAACCGCTGGCCGCCGGCACGCGCAGCGCCGACGGCACCCA CCTCAAGGCCGCGTTGCATTACCCCGATGCTGCCGACGCCCCGCTGCTGATCAAGGTCGGCATCTCGGCCGTCAGCGCCG ACAATGCACTGGCCAACCTGGATGCCGAATTGCCGGACTTCGACTTCGCGCGCGTGCATGCGCAAGCCGTCGCCGCCTGG GAAAAGGAACTGGCCCGCGTGCGCATCGACAGCGATGACGACGCGCAACGGCGCATCTTCTACACCGGCCTGTATCACAG CCTGCTGGCGCCTACGCTGTTCTCCGACGTGGACAACCGCTACCGCGGCATGGACCTGCAGATCCACACCGCGCCGAAGG GCTACAACAACTACAGCACCTACTCGCTGTGGGACACCTACCGCGCCGCGCATCCGCTGCTCACGCTGGTGCAGCCAGAG CGCGTGCCCGATCTGGTGCAATGCCTGGTGCGCGGCGCCAACGAATGCCCGGACGGCGTGGGCATCTGGCCGCTGCAAGG CGTGGAGACCGGCTGCATGATCGGCTATCACTCGGCCGTGGTGTTGGCCGAAGCGCACGCCAAGGGCTTCACCGGCATCG ACTACAAGGCCGCGTGGCCGGCGTATCGCAAGCGTGCGATGGACGACACCACACACGGCCTGGGCGAGTACCGCACGCTC GGTTACATCCCCGCAGACAACGTGGACGAAGCGGTCAGCCGCACGCTCGAATACGCCTACGACGACTGGGCCTGCGCACA CCTGGCACAAGCCGCGGGCGCCAGCGCCGATGCACGCGCATTGCGCGACCGCTCGCGCAACTACCGCAACGTGTTCAATC GCGACAGCGGCTTCGTGCAGGCGCGGCTTGCCGACGGCAGCTGGGCCACACCGTTCGACCCGCGCGGCATGGGCCATATC GCCAAGTGGCGCGATTTCACCGAATCCAGCGCCTGGCAGGCCACCTTCCTCAACCAGCACGATCTGTACGGCTACATGGA TTTGTACGGTGGTCGCGACGGTTTCGTCGCCAAGCTGGACGAGCTGTTTTCCACCAGCTCCGAACTGCCCGCCGATGCAC CGCCGGATATCGACGGCATGGTCGGCCAGTACGCGCATGGCAACGAGCCCAGCCATCACGTGGCGTATCTGTTCGCCTAT GCCGGCCAGCCGTACAAGACCCAGGCGATGGTGCGCCGCTTGCTGCGCGAGCAGTATCACGACGCGCGCAACGGCCTGTC CGGCAACGAAGACTGCGGGCAGATGAGCGCATGGTTCGTGCTCAGCGCATTGGGTCTGTATGCGGTGGATCCGGTTAGCG GCAACTACATCGTGGGCAGCCCCTTGTTCAAGCGCGCCACACTGGATGTGGGCAACGGCCGCACGCTGCGCATCGTTGCC AACAACAGCAGCGAAAAGAACGTCTACGTGCAGTCGCTGAAGTGGAACGGCGCACCGACCAACCGTGCCTGGCTGCGTCA TGCCGATCTTGCCGCAGGCGGCACCCTGGAGTTCGAGATGGGGTCCACGCCCAATCTGAGCTTCGGTGCCAACAAGAAGG ATCTCCCGCCCTCGTTCGCCTAG
Upstream 100 bases:
>100_bases TGCGTAGCCTCTGACCTTTCCTTCTCCCTTTGGGAGAAGGTGCCCGCAGGGCGGATGAGGGTGCCCCGGCATCGGCCCGC AACATTCCGAGACCACACAC
Downstream 100 bases:
>100_bases CGGACGCACAGCCGCGGCAGCTCGACCATGACAGCTCCCGTTAGTCCCCTTTTTCCGCAAGCAGGGGCGCGCTGCCTTCC TTCTCCCGCAAGCGGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Exported Alpha-1 2-Mannosidase; Alpha-1 2-Mannosidase Protein; Immunoreactive; Antigen; Glycosyltransferase; Lipoprotein
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MATRRGFLQGAIAAALFGSVGLPGLARARAGNYALPADARTRADLTRHVDVFIGTGGHGHTFPGATLPFGMVQLSPDTYN AVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDFLLVPVTGEVKLVPGPLDNPDAGYRSRYDHADEAASPGYYRVRLKD SGVHAELTATARAGLHRYHFPKGKPAHVLLDLCHGMQDKPGIPTRISDAQLRVVDERTLTGGRRVYQWAKGRYIYFAMRL SRPFKQVQLYDEDQPLAAGTRSADGTHLKAALHYPDAADAPLLIKVGISAVSADNALANLDAELPDFDFARVHAQAVAAW EKELARVRIDSDDDAQRRIFYTGLYHSLLAPTLFSDVDNRYRGMDLQIHTAPKGYNNYSTYSLWDTYRAAHPLLTLVQPE RVPDLVQCLVRGANECPDGVGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLGEYRTL GYIPADNVDEAVSRTLEYAYDDWACAHLAQAAGASADARALRDRSRNYRNVFNRDSGFVQARLADGSWATPFDPRGMGHI AKWRDFTESSAWQATFLNQHDLYGYMDLYGGRDGFVAKLDELFSTSSELPADAPPDIDGMVGQYAHGNEPSHHVAYLFAY AGQPYKTQAMVRRLLREQYHDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYIVGSPLFKRATLDVGNGRTLRIVA NNSSEKNVYVQSLKWNGAPTNRAWLRHADLAAGGTLEFEMGSTPNLSFGANKKDLPPSFA
Sequences:
>Translated_780_residues MATRRGFLQGAIAAALFGSVGLPGLARARAGNYALPADARTRADLTRHVDVFIGTGGHGHTFPGATLPFGMVQLSPDTYN AVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDFLLVPVTGEVKLVPGPLDNPDAGYRSRYDHADEAASPGYYRVRLKD SGVHAELTATARAGLHRYHFPKGKPAHVLLDLCHGMQDKPGIPTRISDAQLRVVDERTLTGGRRVYQWAKGRYIYFAMRL SRPFKQVQLYDEDQPLAAGTRSADGTHLKAALHYPDAADAPLLIKVGISAVSADNALANLDAELPDFDFARVHAQAVAAW EKELARVRIDSDDDAQRRIFYTGLYHSLLAPTLFSDVDNRYRGMDLQIHTAPKGYNNYSTYSLWDTYRAAHPLLTLVQPE RVPDLVQCLVRGANECPDGVGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLGEYRTL GYIPADNVDEAVSRTLEYAYDDWACAHLAQAAGASADARALRDRSRNYRNVFNRDSGFVQARLADGSWATPFDPRGMGHI AKWRDFTESSAWQATFLNQHDLYGYMDLYGGRDGFVAKLDELFSTSSELPADAPPDIDGMVGQYAHGNEPSHHVAYLFAY AGQPYKTQAMVRRLLREQYHDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYIVGSPLFKRATLDVGNGRTLRIVA NNSSEKNVYVQSLKWNGAPTNRAWLRHADLAAGGTLEFEMGSTPNLSFGANKKDLPPSFA >Mature_779_residues ATRRGFLQGAIAAALFGSVGLPGLARARAGNYALPADARTRADLTRHVDVFIGTGGHGHTFPGATLPFGMVQLSPDTYNA VWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDFLLVPVTGEVKLVPGPLDNPDAGYRSRYDHADEAASPGYYRVRLKDS GVHAELTATARAGLHRYHFPKGKPAHVLLDLCHGMQDKPGIPTRISDAQLRVVDERTLTGGRRVYQWAKGRYIYFAMRLS RPFKQVQLYDEDQPLAAGTRSADGTHLKAALHYPDAADAPLLIKVGISAVSADNALANLDAELPDFDFARVHAQAVAAWE KELARVRIDSDDDAQRRIFYTGLYHSLLAPTLFSDVDNRYRGMDLQIHTAPKGYNNYSTYSLWDTYRAAHPLLTLVQPER VPDLVQCLVRGANECPDGVGIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLGEYRTLG YIPADNVDEAVSRTLEYAYDDWACAHLAQAAGASADARALRDRSRNYRNVFNRDSGFVQARLADGSWATPFDPRGMGHIA KWRDFTESSAWQATFLNQHDLYGYMDLYGGRDGFVAKLDELFSTSSELPADAPPDIDGMVGQYAHGNEPSHHVAYLFAYA GQPYKTQAMVRRLLREQYHDARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYIVGSPLFKRATLDVGNGRTLRIVAN NSSEKNVYVQSLKWNGAPTNRAWLRHADLAAGGTLEFEMGSTPNLSFGANKKDLPPSFA
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85491; Mature: 85359
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRRGFLQGAIAAALFGSVGLPGLARARAGNYALPADARTRADLTRHVDVFIGTGGHGH CCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCC TFPGATLPFGMVQLSPDTYNAVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDFLLVPV CCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHEECC TGEVKLVPGPLDNPDAGYRSRYDHADEAASPGYYRVRLKDSGVHAELTATARAGLHRYHF CCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCEEEEEHHHHHCHHHHCC PKGKPAHVLLDLCHGMQDKPGIPTRISDAQLRVVDERTLTGGRRVYQWAKGRYIYFAMRL CCCCHHHHHHHHHCCCCCCCCCCCEECCCEEEEEECHHCCCCHHHHHHHCCCEEEEEEEC SRPFKQVQLYDEDQPLAAGTRSADGTHLKAALHYPDAADAPLLIKVGISAVSADNALANL CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHC DAELPDFDFARVHAQAVAAWEKELARVRIDSDDDAQRRIFYTGLYHSLLAPTLFSDVDNR CCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHH YRGMDLQIHTAPKGYNNYSTYSLWDTYRAAHPLLTLVQPERVPDLVQCLVRGANECPDGV HCCCEEEEEECCCCCCCCCEEEHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCC GIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLGEYRTL CCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCEE GYIPADNVDEAVSRTLEYAYDDWACAHLAQAAGASADARALRDRSRNYRNVFNRDSGFVQ ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCEEE ARLADGSWATPFDPRGMGHIAKWRDFTESSAWQATFLNQHDLYGYMDLYGGRDGFVAKLD EEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCEEEHHHCCCCCCHHHHHH ELFSTSSELPADAPPDIDGMVGQYAHGNEPSHHVAYLFAYAGQPYKTQAMVRRLLREQYH HHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH DARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYIVGSPLFKRATLDVGNGRTLRIVA HHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCEEEEEECCCCCEEEEEE NNSSEKNVYVQSLKWNGAPTNRAWLRHADLAAGGTLEFEMGSTPNLSFGANKKDLPPSFA CCCCCCEEEEEEEEECCCCCCCHHHEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATRRGFLQGAIAAALFGSVGLPGLARARAGNYALPADARTRADLTRHVDVFIGTGGHGH CCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCC TFPGATLPFGMVQLSPDTYNAVWDSCSGYHESDGSIMGFSHTHLSGTGIGDMLDFLLVPV CCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHEECC TGEVKLVPGPLDNPDAGYRSRYDHADEAASPGYYRVRLKDSGVHAELTATARAGLHRYHF CCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCCCEEEEEHHHHHCHHHHCC PKGKPAHVLLDLCHGMQDKPGIPTRISDAQLRVVDERTLTGGRRVYQWAKGRYIYFAMRL CCCCHHHHHHHHHCCCCCCCCCCCEECCCEEEEEECHHCCCCHHHHHHHCCCEEEEEEEC SRPFKQVQLYDEDQPLAAGTRSADGTHLKAALHYPDAADAPLLIKVGISAVSADNALANL CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCHHHHC DAELPDFDFARVHAQAVAAWEKELARVRIDSDDDAQRRIFYTGLYHSLLAPTLFSDVDNR CCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCHHEEEEHHHHHHHHHHHHHHHHHHH YRGMDLQIHTAPKGYNNYSTYSLWDTYRAAHPLLTLVQPERVPDLVQCLVRGANECPDGV HCCCEEEEEECCCCCCCCCEEEHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCCCCCCC GIWPLQGVETGCMIGYHSAVVLAEAHAKGFTGIDYKAAWPAYRKRAMDDTTHGLGEYRTL CCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCEE GYIPADNVDEAVSRTLEYAYDDWACAHLAQAAGASADARALRDRSRNYRNVFNRDSGFVQ ECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCEEE ARLADGSWATPFDPRGMGHIAKWRDFTESSAWQATFLNQHDLYGYMDLYGGRDGFVAKLD EEECCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCCCEEEHHHCCCCCCHHHHHH ELFSTSSELPADAPPDIDGMVGQYAHGNEPSHHVAYLFAYAGQPYKTQAMVRRLLREQYH HHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH DARNGLSGNEDCGQMSAWFVLSALGLYAVDPVSGNYIVGSPLFKRATLDVGNGRTLRIVA HHHCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCCEEECCCCCEEEEEECCCCCEEEEEE NNSSEKNVYVQSLKWNGAPTNRAWLRHADLAAGGTLEFEMGSTPNLSFGANKKDLPPSFA CCCCCCEEEEEEEEECCCCCCCHHHEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA