| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243809
Identifier: 21243809
GI number: 21243809
Start: 3616162
End: 3617625
Strand: Direct
Name: 21243809
Synonym: XAC3082
Alternate gene names: NA
Gene position: 3616162-3617625 (Clockwise)
Preceding gene: 21243808
Following gene: 21243810
Centisome position: 69.87
GC content: 66.6
Gene sequence:
>1464_bases ATGCACACCCGCCGCGACATCCTTCAACTCCTAGGCGCCAGTGCCGGTGCCGGCCTGCTCGCCGCCGCACTGCCCGCCAT TGCGGCCGCGCCCGCCACCGGCGCATCCAGCGTAGCCAGCGGCTTTGTCAGCAAGCGCCCGCCCAAGGCGCAGCGCCGCT TCGTCAGCAAGGCGGTCGAACAGCAAATCGCGCAGATCAAGGCGCGCATCGCCGATCCGGAACTGGCCTGGCTGTTCGAG AACTGCTACCCCAACACCCTCGACACCACGGTGGAAACCGGCACCCGCGACGGCAAGCCGGACACCTTCGTCATCACCGG CGACATCCACGCGATGTGGCTGCGCGATTCCTCCGCGCAGGTGCACCCGTACGTGCCGCTGGCCAGGCGCGACCCGGCGT TGCGGCGCATGTTCCATGGCCTGATCCAGCGCCAGGCCGCGTGCATCGCGCTCGACCCGTATGCGAACGCGTTCCTGCCC GATGGCCAGACCCAGCGCCTGAAATGGTCGCTCAACGACATCACCGAAATGAAGCCCGGTGTGGGCGAGCGCAAGTGGGA AGTCGATTCGCTGTGCTACCCCATTCGCATTGCGCACGAATACTGGCGCGCCACCGGCGACGCCGCACCGTTCGACGACG ACTGGCGCGCGGCGATGCACGTGGTGGTCAAGACCTTCCGCGAGCAGCAGCGCAAGAACGACCGCGGCCCGTACGTGTTC CAGCGGCCTTCGCCGCTGGCCACCGAAACCCTGGTGCTGGAAGGCTACGGCCAGCCGACCAAGCCCAATGGCATGATCCA CTCGATGTTCCGCCCCTCCGACGACGCCTGCGTGTTCCCGTTGTTCGTGCCGGCCAACCTGTTCGCGGTGACCTCGCTGC GGCAGCTGGCCACGATCAGCACCGCCTTGCATCGCGACACCGCCTTTGCCGCCGAGTGCACCGCGTTGGCAGACGAAGTG GAAACCGCCACCCGCCAGTTCGGCCAGCAACGCGATGCCGACGGGCAGGCGTACTGGGCGTTCGAAGTGGATGGCTTCGG CAACCAGTTGTTCATCGACGACGCCAATGCACCGGGCCTGCTCAGCCTGGCCTACCTGGGCTGCTGCGACCGCGCCGACC CGGTGTTCCTGCGCACGCGCCAGCTGGCCTGGAGCGAGCGCAACCCGTATTTCTCGCGCGGCAAGGCGGCCGAAGGCGTC GGCAGCCCGCACAGCGGCATGGGAACGATCTGGCCGATGTCCATCATTCAATACGCGCTGGTCAGCGACGACGACGCGCA ACTGCGCCAATGCCTGCAGTGGTTGAAAACCACCCACGCCGGCACCGGCTTCATGCACGAAGCCTTCGACAAGGACAACC CGAACACCTTCACCCGCGACTGGTTCGCCTGGGCCAACACCTTGTTCGGCGAACTGATCATCGACCTGCATCAACGCAAA CCCCAGCTGCTGCGTAGCCTCTGA
Upstream 100 bases:
>100_bases ATTGGTCATGCATAGGTCTCATCCTTAGCCGGCGGGTAGCGCGGCGCTGGAGCGGCACTGGTGTGCAGGCCTGCAGTCGA AATCCAAGGAGTTCCAGGTC
Downstream 100 bases:
>100_bases CCTTTCCTTCTCCCTTTGGGAGAAGGTGCCCGCAGGGCGGATGAGGGTGCCCCGGCATCGGCCCGCAACATTCCGAGACC ACACACATGGCAACACGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MHTRRDILQLLGASAGAGLLAAALPAIAAAPATGASSVASGFVSKRPPKAQRRFVSKAVEQQIAQIKARIADPELAWLFE NCYPNTLDTTVETGTRDGKPDTFVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLIQRQAACIALDPYANAFLP DGQTQRLKWSLNDITEMKPGVGERKWEVDSLCYPIRIAHEYWRATGDAAPFDDDWRAAMHVVVKTFREQQRKNDRGPYVF QRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVTSLRQLATISTALHRDTAFAAECTALADEV ETATRQFGQQRDADGQAYWAFEVDGFGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGKAAEGV GSPHSGMGTIWPMSIIQYALVSDDDAQLRQCLQWLKTTHAGTGFMHEAFDKDNPNTFTRDWFAWANTLFGELIIDLHQRK PQLLRSL
Sequences:
>Translated_487_residues MHTRRDILQLLGASAGAGLLAAALPAIAAAPATGASSVASGFVSKRPPKAQRRFVSKAVEQQIAQIKARIADPELAWLFE NCYPNTLDTTVETGTRDGKPDTFVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLIQRQAACIALDPYANAFLP DGQTQRLKWSLNDITEMKPGVGERKWEVDSLCYPIRIAHEYWRATGDAAPFDDDWRAAMHVVVKTFREQQRKNDRGPYVF QRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVTSLRQLATISTALHRDTAFAAECTALADEV ETATRQFGQQRDADGQAYWAFEVDGFGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGKAAEGV GSPHSGMGTIWPMSIIQYALVSDDDAQLRQCLQWLKTTHAGTGFMHEAFDKDNPNTFTRDWFAWANTLFGELIIDLHQRK PQLLRSL >Mature_487_residues MHTRRDILQLLGASAGAGLLAAALPAIAAAPATGASSVASGFVSKRPPKAQRRFVSKAVEQQIAQIKARIADPELAWLFE NCYPNTLDTTVETGTRDGKPDTFVITGDIHAMWLRDSSAQVHPYVPLARRDPALRRMFHGLIQRQAACIALDPYANAFLP DGQTQRLKWSLNDITEMKPGVGERKWEVDSLCYPIRIAHEYWRATGDAAPFDDDWRAAMHVVVKTFREQQRKNDRGPYVF QRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVTSLRQLATISTALHRDTAFAAECTALADEV ETATRQFGQQRDADGQAYWAFEVDGFGNQLFIDDANAPGLLSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGKAAEGV GSPHSGMGTIWPMSIIQYALVSDDDAQLRQCLQWLKTTHAGTGFMHEAFDKDNPNTFTRDWFAWANTLFGELIIDLHQRK PQLLRSL
Specific function: Unknown
COG id: COG3538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54228; Mature: 54228
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTRRDILQLLGASAGAGLLAAALPAIAAAPATGASSVASGFVSKRPPKAQRRFVSKAVE CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH QQIAQIKARIADPELAWLFENCYPNTLDTTVETGTRDGKPDTFVITGDIHAMWLRDSSAQ HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCEEEEEEECCCCC VHPYVPLARRDPALRRMFHGLIQRQAACIALDPYANAFLPDGQTQRLKWSLNDITEMKPG CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCC VGERKWEVDSLCYPIRIAHEYWRATGDAAPFDDDWRAAMHVVVKTFREQQRKNDRGPYVF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE QRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVTSLRQLATIS ECCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH TALHRDTAFAAECTALADEVETATRQFGQQRDADGQAYWAFEVDGFGNQLFIDDANAPGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCH LSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGKAAEGVGSPHSGMGTIWPMSIIQYAL HHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VSDDDAQLRQCLQWLKTTHAGTGFMHEAFDKDNPNTFTRDWFAWANTLFGELIIDLHQRK CCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC PQLLRSL HHHHHCC >Mature Secondary Structure MHTRRDILQLLGASAGAGLLAAALPAIAAAPATGASSVASGFVSKRPPKAQRRFVSKAVE CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH QQIAQIKARIADPELAWLFENCYPNTLDTTVETGTRDGKPDTFVITGDIHAMWLRDSSAQ HHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCEEEEEEECCCCC VHPYVPLARRDPALRRMFHGLIQRQAACIALDPYANAFLPDGQTQRLKWSLNDITEMKPG CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHCCCC VGERKWEVDSLCYPIRIAHEYWRATGDAAPFDDDWRAAMHVVVKTFREQQRKNDRGPYVF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE QRPSPLATETLVLEGYGQPTKPNGMIHSMFRPSDDACVFPLFVPANLFAVTSLRQLATIS ECCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHH TALHRDTAFAAECTALADEVETATRQFGQQRDADGQAYWAFEVDGFGNQLFIDDANAPGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCH LSLAYLGCCDRADPVFLRTRQLAWSERNPYFSRGKAAEGVGSPHSGMGTIWPMSIIQYAL HHHHHHHCCCCCCCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH VSDDDAQLRQCLQWLKTTHAGTGFMHEAFDKDNPNTFTRDWFAWANTLFGELIIDLHQRK CCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC PQLLRSL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA