| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243750
Identifier: 21243750
GI number: 21243750
Start: 3529511
End: 3530197
Strand: Direct
Name: 21243750
Synonym: XAC3023
Alternate gene names: NA
Gene position: 3529511-3530197 (Clockwise)
Preceding gene: 21243749
Following gene: 21243751
Centisome position: 68.2
GC content: 66.52
Gene sequence:
>687_bases ATGACCTTCTACACAGGCTTCGACACCGATCAATTCCCCGGATTGCCCGCCCTTGACTGGCTCAAGACCCAGGCCGAGCT GGCGTGGTGCGGCTACTACCTGGCACCGGCGCCAAGCCATGCCGACACCGGCTGGATGGGCCAACGGGCTGCGTTGATCG CACAAGGCTGGGGCCTGGCGCCCGTCTACCTTGGTCAGCAGACGATCGGCCCCGGTTCGCACGACGTCACCGCCCGGCAG GGCAGCCTCGATGGTGCACAGGCCGCAGCGCTGGCACGCGCCGAAGGCTTTCCCGATGGCGCGGTGGTCTATCTCGACTG GGAAGATGGCGGCAGCCCACCACAGGCAGCCATCGACTACATCCGTATGTGGATCGCCGCGCTGTTGGGCAATGGTTTTT CGCCCGGCCTGTACTGCTCGCACGCGCGCGCAGTGGAAGTGCTGTCGCGGATCGGCCCCTGCCCCTCCCCGCGCGTCTGG GCCTGGCGGGTCTCCACGGCAGGGCGTCACCTCTACGCCGGCGACATCCGGCACGTCCAGCCCTCCGATCCGGCCGGCTG CGGCTATTCCCAGGCCATGCTCTGGCAATACGAACAGGATGCGGTGCTGTCGCTTCCTGGTACGCCGTGCGATGGGCTGG AAGTTGACCTCAGTTATTCGAGTTTAGCCGATCCGAGCTCGGCGTGA
Upstream 100 bases:
>100_bases TGCCGGCTCCCCGCCGCCACGTTGATCCAGCAGCGCAGCCCCACTTGCCGCGGCCATCTAGCCCCGGCCCAGCCAACGCC CGATCCGAAGGAATTCCGAC
Downstream 100 bases:
>100_bases TTGCGCGTATTTCCTGCATCGGGAAAAAGCAGAAACCCATAAACTCCAGCAATGCATGAAGATCCCTTGCAACCAACCCG ACACTCCCTGCATCGATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTFYTGFDTDQFPGLPALDWLKTQAELAWCGYYLAPAPSHADTGWMGQRAALIAQGWGLAPVYLGQQTIGPGSHDVTARQ GSLDGAQAAALARAEGFPDGAVVYLDWEDGGSPPQAAIDYIRMWIAALLGNGFSPGLYCSHARAVEVLSRIGPCPSPRVW AWRVSTAGRHLYAGDIRHVQPSDPAGCGYSQAMLWQYEQDAVLSLPGTPCDGLEVDLSYSSLADPSSA
Sequences:
>Translated_228_residues MTFYTGFDTDQFPGLPALDWLKTQAELAWCGYYLAPAPSHADTGWMGQRAALIAQGWGLAPVYLGQQTIGPGSHDVTARQ GSLDGAQAAALARAEGFPDGAVVYLDWEDGGSPPQAAIDYIRMWIAALLGNGFSPGLYCSHARAVEVLSRIGPCPSPRVW AWRVSTAGRHLYAGDIRHVQPSDPAGCGYSQAMLWQYEQDAVLSLPGTPCDGLEVDLSYSSLADPSSA >Mature_227_residues TFYTGFDTDQFPGLPALDWLKTQAELAWCGYYLAPAPSHADTGWMGQRAALIAQGWGLAPVYLGQQTIGPGSHDVTARQG SLDGAQAAALARAEGFPDGAVVYLDWEDGGSPPQAAIDYIRMWIAALLGNGFSPGLYCSHARAVEVLSRIGPCPSPRVWA WRVSTAGRHLYAGDIRHVQPSDPAGCGYSQAMLWQYEQDAVLSLPGTPCDGLEVDLSYSSLADPSSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24305; Mature: 24174
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFYTGFDTDQFPGLPALDWLKTQAELAWCGYYLAPAPSHADTGWMGQRAALIAQGWGLA CEEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHEEEECCCCCC PVYLGQQTIGPGSHDVTARQGSLDGAQAAALARAEGFPDGAVVYLDWEDGGSPPQAAIDY EEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH IRMWIAALLGNGFSPGLYCSHARAVEVLSRIGPCPSPRVWAWRVSTAGRHLYAGDIRHVQ HHHHHHHHHCCCCCCCEEECHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCEEEC PSDPAGCGYSQAMLWQYEQDAVLSLPGTPCDGLEVDLSYSSLADPSSA CCCCCCCCCCHHEEEEECCCCEEECCCCCCCCEEEEECHHHCCCCCCC >Mature Secondary Structure TFYTGFDTDQFPGLPALDWLKTQAELAWCGYYLAPAPSHADTGWMGQRAALIAQGWGLA EEECCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHEEEECCCCCC PVYLGQQTIGPGSHDVTARQGSLDGAQAAALARAEGFPDGAVVYLDWEDGGSPPQAAIDY EEEECCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH IRMWIAALLGNGFSPGLYCSHARAVEVLSRIGPCPSPRVWAWRVSTAGRHLYAGDIRHVQ HHHHHHHHHCCCCCCCEEECHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEECCCEEEC PSDPAGCGYSQAMLWQYEQDAVLSLPGTPCDGLEVDLSYSSLADPSSA CCCCCCCCCCHHEEEEECCCCEEECCCCCCCCEEEEECHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA