| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243751
Identifier: 21243751
GI number: 21243751
Start: 3530764
End: 3531426
Strand: Direct
Name: 21243751
Synonym: XAC3024
Alternate gene names: NA
Gene position: 3530764-3531426 (Clockwise)
Preceding gene: 21243750
Following gene: 21243752
Centisome position: 68.22
GC content: 52.49
Gene sequence:
>663_bases ATGCCGGCCTGCACCTTCCGCCTCGAAAGGAGATGTGAAATGACAGTAATAGTTGATTTGATGTCAGAACAAACCAATTC CGTCGGCATCGCAGGCATCTCACGACACCAAGGACGTTGGAGGCACCGGCCAGACATGCGCTATGAAGTCGACCCCGACC CGACCTTGATCGCTTGGACCGAGCAAAACATGGGAATCGGATCCTCAAGATTATCGCGCTCTCCCCTGTTACAGCAATTT ACAGGTCATACGGCCGTTCTGTCTCGTCTTCGCGGGCGGGTCCAGTTCGTCAGGGGACTGGTACCGAATGTGTCGGGTTA TCCATGGGCGTTCTTTGGCCAAGGCGGTGGAGGCCACTGGCAAGATGATAGCGCCATGCTTGACGACCCGACCTGCGTCA GTTTCGAGATACCTGTAACAGAGGAGGATGCCGGAAATTTCCCGCGATGGTTCCGTGCTGTGGCTCCGGAAATCAATGTC TTCGCACTGAAGAATGGTGACGGATTCAATAGCTTCAATTGCGTCCTAGCTTCTCTCACGCTGCTCATCAACTACCTTCT CGAGTCGGAGAACGACTATTCCTCCTATGTCATCCAACTGACAAAAGTACGCGACTCGCTTCAAGGCCATTTGATGCAAA ACATCATGGGTGGATTTATATAA
Upstream 100 bases:
>100_bases TAACCGCATAAAATCTAGCGCCTGCAGCCAGCCCACGAGTACGCATTACCGCAGCGACAAGAGAACTCCGCCGTCAGGTC GCTCGATCTCGGTACGGCAT
Downstream 100 bases:
>100_bases ATCCACCACATGACACGCCCGCCGCAATCACAACCCCGGTCAACAGCAGTGCATTGAATAATCACGCAACTCGACTACAG CGAAAGTTTAGCAGAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPACTFRLERRCEMTVIVDLMSEQTNSVGIAGISRHQGRWRHRPDMRYEVDPDPTLIAWTEQNMGIGSSRLSRSPLLQQF TGHTAVLSRLRGRVQFVRGLVPNVSGYPWAFFGQGGGGHWQDDSAMLDDPTCVSFEIPVTEEDAGNFPRWFRAVAPEINV FALKNGDGFNSFNCVLASLTLLINYLLESENDYSSYVIQLTKVRDSLQGHLMQNIMGGFI
Sequences:
>Translated_220_residues MPACTFRLERRCEMTVIVDLMSEQTNSVGIAGISRHQGRWRHRPDMRYEVDPDPTLIAWTEQNMGIGSSRLSRSPLLQQF TGHTAVLSRLRGRVQFVRGLVPNVSGYPWAFFGQGGGGHWQDDSAMLDDPTCVSFEIPVTEEDAGNFPRWFRAVAPEINV FALKNGDGFNSFNCVLASLTLLINYLLESENDYSSYVIQLTKVRDSLQGHLMQNIMGGFI >Mature_219_residues PACTFRLERRCEMTVIVDLMSEQTNSVGIAGISRHQGRWRHRPDMRYEVDPDPTLIAWTEQNMGIGSSRLSRSPLLQQFT GHTAVLSRLRGRVQFVRGLVPNVSGYPWAFFGQGGGGHWQDDSAMLDDPTCVSFEIPVTEEDAGNFPRWFRAVAPEINVF ALKNGDGFNSFNCVLASLTLLINYLLESENDYSSYVIQLTKVRDSLQGHLMQNIMGGFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24734; Mature: 24603
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPACTFRLERRCEMTVIVDLMSEQTNSVGIAGISRHQGRWRHRPDMRYEVDPDPTLIAWT CCCCCHHHHCCCCHHHEEEHHHCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEE EQNMGIGSSRLSRSPLLQQFTGHTAVLSRLRGRVQFVRGLVPNVSGYPWAFFGQGGGGHW CCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC QDDSAMLDDPTCVSFEIPVTEEDAGNFPRWFRAVAPEINVFALKNGDGFNSFNCVLASLT CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH LLINYLLESENDYSSYVIQLTKVRDSLQGHLMQNIMGGFI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PACTFRLERRCEMTVIVDLMSEQTNSVGIAGISRHQGRWRHRPDMRYEVDPDPTLIAWT CCCCHHHHCCCCHHHEEEHHHCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCEEEEE EQNMGIGSSRLSRSPLLQQFTGHTAVLSRLRGRVQFVRGLVPNVSGYPWAFFGQGGGGHW CCCCCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC QDDSAMLDDPTCVSFEIPVTEEDAGNFPRWFRAVAPEINVFALKNGDGFNSFNCVLASLT CCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHH LLINYLLESENDYSSYVIQLTKVRDSLQGHLMQNIMGGFI HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA