| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243747
Identifier: 21243747
GI number: 21243747
Start: 3527283
End: 3527630
Strand: Direct
Name: 21243747
Synonym: XAC3020
Alternate gene names: NA
Gene position: 3527283-3527630 (Clockwise)
Preceding gene: 21243746
Following gene: 21243748
Centisome position: 68.15
GC content: 63.51
Gene sequence:
>348_bases ATGGAACCGACAAAGGTCAATGCGCAGGTCATCGATGTCATCAACCAGGTGCAGCTGGCGACCATGAGCCCGCAGGTCGT GCTGACCAGCGGAGCCGGCAAAGCCTACCAATCGGTGGCGCAGTCCACCGCCATTGCGGTGCAGGACGCCACCGACGCGC TACGCAATGTCTCCACGATCGCGACCACCGCGGTCGGCGTGGCGATGGCGCAGTACCTGGCCACCGGCGATGACAAGTAC GTCACTGCACTTAACCAGGCGCAAGCACTGATGCAGGGCGCCACCGACGACTTCGCCAGGATCGGTTCGGCGGCCGGCCT GGTACTGAAAAACTTTCCCGCCGGTTGA
Upstream 100 bases:
>100_bases CGCCGCCTGCTCAGTCATAGGGCGTCCGCAGAGGTGAGGTCCGCCCCCCCCTACCACCAGGCCTCATTGAAAGGCGGCCG ATCATTCCATGGGAACCAAG
Downstream 100 bases:
>100_bases ATCCACAAGGAGTCACGCAATGTCCGTTTCAATCGCAGGCCGCCTGATCTCGATGCCGACGATGCTCTCGATGCTGGGAA GGCAGTGCCTGGCCTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MEPTKVNAQVIDVINQVQLATMSPQVVLTSGAGKAYQSVAQSTAIAVQDATDALRNVSTIATTAVGVAMAQYLATGDDKY VTALNQAQALMQGATDDFARIGSAAGLVLKNFPAG
Sequences:
>Translated_115_residues MEPTKVNAQVIDVINQVQLATMSPQVVLTSGAGKAYQSVAQSTAIAVQDATDALRNVSTIATTAVGVAMAQYLATGDDKY VTALNQAQALMQGATDDFARIGSAAGLVLKNFPAG >Mature_115_residues MEPTKVNAQVIDVINQVQLATMSPQVVLTSGAGKAYQSVAQSTAIAVQDATDALRNVSTIATTAVGVAMAQYLATGDDKY VTALNQAQALMQGATDDFARIGSAAGLVLKNFPAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11772; Mature: 11772
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPTKVNAQVIDVINQVQLATMSPQVVLTSGAGKAYQSVAQSTAIAVQDATDALRNVSTI CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATTAVGVAMAQYLATGDDKYVTALNQAQALMQGATDDFARIGSAAGLVLKNFPAG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEPTKVNAQVIDVINQVQLATMSPQVVLTSGAGKAYQSVAQSTAIAVQDATDALRNVSTI CCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ATTAVGVAMAQYLATGDDKYVTALNQAQALMQGATDDFARIGSAAGLVLKNFPAG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA