| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243748
Identifier: 21243748
GI number: 21243748
Start: 3527650
End: 3528720
Strand: Direct
Name: 21243748
Synonym: XAC3021
Alternate gene names: NA
Gene position: 3527650-3528720 (Clockwise)
Preceding gene: 21243747
Following gene: 21243749
Centisome position: 68.16
GC content: 66.76
Gene sequence:
>1071_bases ATGTCCGTTTCAATCGCAGGCCGCCTGATCTCGATGCCGACGATGCTCTCGATGCTGGGAAGGCAGTGCCTGGCCTTCAT CGATGGAGGCACCCAGTGGCTGGCATGGGCGATCCAATCGCCCGGTGTGCGCTACGATTTTCCCGACGAGAGCAGCTTGC TCGACGAAGTGCAGCAAGGCCTGCACGGCTCGCGCCTGGCCTTGTTGCCGCAGCTGGAGCTGAGGGTCAGCCCGGTCAAG CTGATGACCTTGAGTCCGCCCGACCTGGGCACGCTGGCGCAGGCCGAAGCCAGAGACACCGGCTCGGTGGTCAAGGCGCA GCTGCAGCGCATCTTTCGCGACAACGCCCTATACACCGCAAGCGACCTGGCCGCAGGCCGCAGCCTGCTGACACAGCTGA AGATCGATGGCGCCGGCGTGTTCCAGTCGTTGGACATGGAAGAAAGCCTGGCACTCCGCCAGCTGGCCGCCGACGCGCCG CCGGACAACGCGACGCCGGCACTGCAGCAGGAAGCGGCGGCATTCGCCATCGAGCAGGCGCGCACGCCGCTGGAATTCTG CGATTACTACCGCTTCTATCTGGCCTGCACTTCCACGATCGCAGCTGTGGACGAACGCGCGCATGCGGCAGCATCGGCAC TGCAGACGCTGTTGCCGCAGCTGTTCACCACCCTGGATTGCCCACAGGTGCAGGGGCTGCCTTCGCCCAACGAGGTCGAA CGCAGCGTTGCCGAATGGCTGGCACGCGGTCGCCAGATCGGCTTCGCGCGGCTATCGCTGGCGGCCCAGCAGATCGTCCA GCACACCCGCTACCGAGGCGACGGCGGCGACCAGGCGGCGGGCGATGCGATCCGCCTCTACCTGCAGTCGGCGCAGGCCT TCCTGGCGGCCAACCGGCCCAGCCGCGGCGTGCTGGGCCAGGATGGCAGCAGCTGCGTGTTCACCATGCAGAACGACGCC CTGGCTGCACTGCTGCAGGTCAACGGCGGCATCATCTCGCTCCGCGACTTCGGTGCCGCACCTGCATCACCCACCACCTC GCAAGACACGGATGCGGAGGCCACGCAGTGA
Upstream 100 bases:
>100_bases CTGATGCAGGGCGCCACCGACGACTTCGCCAGGATCGGTTCGGCGGCCGGCCTGGTACTGAAAAACTTTCCCGCCGGTTG AATCCACAAGGAGTCACGCA
Downstream 100 bases:
>100_bases GCGCACCGCCCCCGCCTGCTGCGGCCGGCGACCAGGTCCCGCTTGCGACCAGCGCCGCCGACGCGGCGCGCGAAGCGGTG CATGCAGGTCGCGCCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSVSIAGRLISMPTMLSMLGRQCLAFIDGGTQWLAWAIQSPGVRYDFPDESSLLDEVQQGLHGSRLALLPQLELRVSPVK LMTLSPPDLGTLAQAEARDTGSVVKAQLQRIFRDNALYTASDLAAGRSLLTQLKIDGAGVFQSLDMEESLALRQLAADAP PDNATPALQQEAAAFAIEQARTPLEFCDYYRFYLACTSTIAAVDERAHAAASALQTLLPQLFTTLDCPQVQGLPSPNEVE RSVAEWLARGRQIGFARLSLAAQQIVQHTRYRGDGGDQAAGDAIRLYLQSAQAFLAANRPSRGVLGQDGSSCVFTMQNDA LAALLQVNGGIISLRDFGAAPASPTTSQDTDAEATQ
Sequences:
>Translated_356_residues MSVSIAGRLISMPTMLSMLGRQCLAFIDGGTQWLAWAIQSPGVRYDFPDESSLLDEVQQGLHGSRLALLPQLELRVSPVK LMTLSPPDLGTLAQAEARDTGSVVKAQLQRIFRDNALYTASDLAAGRSLLTQLKIDGAGVFQSLDMEESLALRQLAADAP PDNATPALQQEAAAFAIEQARTPLEFCDYYRFYLACTSTIAAVDERAHAAASALQTLLPQLFTTLDCPQVQGLPSPNEVE RSVAEWLARGRQIGFARLSLAAQQIVQHTRYRGDGGDQAAGDAIRLYLQSAQAFLAANRPSRGVLGQDGSSCVFTMQNDA LAALLQVNGGIISLRDFGAAPASPTTSQDTDAEATQ >Mature_355_residues SVSIAGRLISMPTMLSMLGRQCLAFIDGGTQWLAWAIQSPGVRYDFPDESSLLDEVQQGLHGSRLALLPQLELRVSPVKL MTLSPPDLGTLAQAEARDTGSVVKAQLQRIFRDNALYTASDLAAGRSLLTQLKIDGAGVFQSLDMEESLALRQLAADAPP DNATPALQQEAAAFAIEQARTPLEFCDYYRFYLACTSTIAAVDERAHAAASALQTLLPQLFTTLDCPQVQGLPSPNEVER SVAEWLARGRQIGFARLSLAAQQIVQHTRYRGDGGDQAAGDAIRLYLQSAQAFLAANRPSRGVLGQDGSSCVFTMQNDAL AALLQVNGGIISLRDFGAAPASPTTSQDTDAEATQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38109; Mature: 37978
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSIAGRLISMPTMLSMLGRQCLAFIDGGTQWLAWAIQSPGVRYDFPDESSLLDEVQQG CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHEEECCCCCCCCCCCHHHHHHHHHHC LHGSRLALLPQLELRVSPVKLMTLSPPDLGTLAQAEARDTGSVVKAQLQRIFRDNALYTA CCCCEEEECCCHHEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEH SDLAAGRSLLTQLKIDGAGVFQSLDMEESLALRQLAADAPPDNATPALQQEAAAFAIEQA HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH RTPLEFCDYYRFYLACTSTIAAVDERAHAAASALQTLLPQLFTTLDCPQVQGLPSPNEVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH RSVAEWLARGRQIGFARLSLAAQQIVQHTRYRGDGGDQAAGDAIRLYLQSAQAFLAANRP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SRGVLGQDGSSCVFTMQNDALAALLQVNGGIISLRDFGAAPASPTTSQDTDAEATQ CCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SVSIAGRLISMPTMLSMLGRQCLAFIDGGTQWLAWAIQSPGVRYDFPDESSLLDEVQQG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHEEECCCCCCCCCCCHHHHHHHHHHC LHGSRLALLPQLELRVSPVKLMTLSPPDLGTLAQAEARDTGSVVKAQLQRIFRDNALYTA CCCCEEEECCCHHEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCEEH SDLAAGRSLLTQLKIDGAGVFQSLDMEESLALRQLAADAPPDNATPALQQEAAAFAIEQA HHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH RTPLEFCDYYRFYLACTSTIAAVDERAHAAASALQTLLPQLFTTLDCPQVQGLPSPNEVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH RSVAEWLARGRQIGFARLSLAAQQIVQHTRYRGDGGDQAAGDAIRLYLQSAQAFLAANRP HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC SRGVLGQDGSSCVFTMQNDALAALLQVNGGIISLRDFGAAPASPTTSQDTDAEATQ CCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA