Click here to switch to the map view.

The map label for this gene is yjfI [H]

Identifier: 21243735

GI number: 21243735

Start: 3519172

End: 3519723

Strand: Reverse

Name: yjfI [H]

Synonym: XAC3008

Alternate gene names: 21243735

Gene position: 3519723-3519172 (Counterclockwise)

Preceding gene: 21243736

Following gene: 21243734

Centisome position: 68.01

GC content: 61.59

Gene sequence:

>552_bases
TTGCTCGCCTGCCGCGCGCCTGACCAGCTGACTTTCGGCCCTTTCTGCCGGTCACGGGCAGTCTGTAGTATGTCCGGTCG
CTGCAGGACATTCGCTGCACCACCACCACGGCATGACCAAAGGACAGGACATCGTATGACGCAGTACACCACCGTCGAAT
TGCACGGCCTGCTGGCCGAGCGCTACCGTGGCCAGCCAATCCATGTCGAACTGATCGACGGCATGGAGCCGGCCATCAAT
CTCACCCTGGCCGACCACGGCGACATGCAGATCCAGGTTGCCGCTTCCGGCTCTCAGGTTTTCGTGTCCACGCTGCTGGC
CCATGCCGAGCACGTCAACGACCGCGCCGCCTTCAACGACGCCTGCCTGCGCCTGAATCCGCTCAACCCCTTGTCCAACC
TGGGACTGGTCCAGGTCGACGGCAAGGACCGTTATGTCGTGTTTGGCGAACTGTCGGCCTCCTCGACGCTCGACCAGATC
GACGAAGAAATCCAGACCCTGGCGGCCAATACGTTGGATGCCGCCGAATCTCTCAAGCCGTTCTTTTCCTAA

Upstream 100 bases:

>100_bases
GGCGCTACGAGGCCGACGCGGCCAGCCATTGGAGCAAGCGGATGCTGTATCCGTGAGGCAGCCGCCCGGCATGGGGCGAC
ACGCCAGCTGAACGGGCGGT

Downstream 100 bases:

>100_bases
AGGCGTGTTGTCATGAGTATCTTTTCCAAGCTGATCACGCTGCTGCGTGGTACCGCGCACGAAACCGGCCAGAAGGCCGT
CGACGCCAATGCGCTGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MLACRAPDQLTFGPFCRSRAVCSMSGRCRTFAAPPPRHDQRTGHRMTQYTTVELHGLLAERYRGQPIHVELIDGMEPAIN
LTLADHGDMQIQVAASGSQVFVSTLLAHAEHVNDRAAFNDACLRLNPLNPLSNLGLVQVDGKDRYVVFGELSASSTLDQI
DEEIQTLAANTLDAAESLKPFFS

Sequences:

>Translated_183_residues
MLACRAPDQLTFGPFCRSRAVCSMSGRCRTFAAPPPRHDQRTGHRMTQYTTVELHGLLAERYRGQPIHVELIDGMEPAIN
LTLADHGDMQIQVAASGSQVFVSTLLAHAEHVNDRAAFNDACLRLNPLNPLSNLGLVQVDGKDRYVVFGELSASSTLDQI
DEEIQTLAANTLDAAESLKPFFS
>Mature_183_residues
MLACRAPDQLTFGPFCRSRAVCSMSGRCRTFAAPPPRHDQRTGHRMTQYTTVELHGLLAERYRGQPIHVELIDGMEPAIN
LTLADHGDMQIQVAASGSQVFVSTLLAHAEHVNDRAAFNDACLRLNPLNPLSNLGLVQVDGKDRYVVFGELSASSTLDQI
DEEIQTLAANTLDAAESLKPFFS

Specific function: Unknown

COG id: COG3789

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790624, Length=101, Percent_Identity=34.6534653465347, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019231 [H]

Pfam domain/function: PF09938 DUF2170 [H]

EC number: NA

Molecular weight: Translated: 20050; Mature: 20050

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLACRAPDQLTFGPFCRSRAVCSMSGRCRTFAAPPPRHDQRTGHRMTQYTTVELHGLLAE
CCCCCCCCCCEECHHHHCCCEECCCCCEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHH
RYRGQPIHVELIDGMEPAINLTLADHGDMQIQVAASGSQVFVSTLLAHAEHVNDRAAFND
HHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHCCCC
ACLRLNPLNPLSNLGLVQVDGKDRYVVFGELSASSTLDQIDEEIQTLAANTLDAAESLKP
CEEEECCCCCHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FFS
CCC
>Mature Secondary Structure
MLACRAPDQLTFGPFCRSRAVCSMSGRCRTFAAPPPRHDQRTGHRMTQYTTVELHGLLAE
CCCCCCCCCCEECHHHHCCCEECCCCCEEEECCCCCCCCCCCCCEEEEEEEHHHHHHHHH
RYRGQPIHVELIDGMEPAINLTLADHGDMQIQVAASGSQVFVSTLLAHAEHVNDRAAFND
HHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHCCCC
ACLRLNPLNPLSNLGLVQVDGKDRYVVFGELSASSTLDQIDEEIQTLAANTLDAAESLKP
CEEEECCCCCHHHCCEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
FFS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]