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The map label for this gene is bedB [H]

Identifier: 21243667

GI number: 21243667

Start: 3444795

End: 3445124

Strand: Direct

Name: bedB [H]

Synonym: XAC2940

Alternate gene names: 21243667

Gene position: 3444795-3445124 (Clockwise)

Preceding gene: 21243666

Following gene: 21243668

Centisome position: 66.56

GC content: 63.33

Gene sequence:

>330_bases
ATGAGCGACACCTGGACCTTCGTCTGTGCCAGCGATGCGCTGCTGCCCGGTGAAATGCAGACCGTCTGGGACGAGGTCAC
CGATACGCCGATCGTGGTGTTCAACCTCGATGGCGCCTTGTACGCGCTGGAAGACCGCTGCAGCCACGAAGACTACGAGC
TGTCGCCTGGCAGCTTCGATCCGGTAGCCGGCACCATCGAATGTCAGTTGCATAGCGCGCGCTTCGATATCCGCGACGGC
CGCCCTCTGTGCGCGCCTGCCTATACGGCCGTGCCCAAGTTCCCGGTCAAGCGCGAACACGACGGCATCTGGACCCGCGA
CGATCGTTGA

Upstream 100 bases:

>100_bases
TCGTCAAACCCTTCCCGTATGGCGACGAGCGCTTCGGCATTCCGCTGCGCCAGGATCTGCGTTTTGAAGTGCTGGAAAAG
CAGTTGAACGGGCCAACCCC

Downstream 100 bases:

>100_bases
AGCGGGCGCGTTGCAGCGACGGTGCCGCTGCACGGCGCCACACATCGCAGCGTCTGCCACCGACTGGCAGATATTGCAAA
GAAGAATGATTTGCATTTAA

Product: benzene 1,2-dioxygenase ferredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSDTWTFVCASDALLPGEMQTVWDEVTDTPIVVFNLDGALYALEDRCSHEDYELSPGSFDPVAGTIECQLHSARFDIRDG
RPLCAPAYTAVPKFPVKREHDGIWTRDDR

Sequences:

>Translated_109_residues
MSDTWTFVCASDALLPGEMQTVWDEVTDTPIVVFNLDGALYALEDRCSHEDYELSPGSFDPVAGTIECQLHSARFDIRDG
RPLCAPAYTAVPKFPVKREHDGIWTRDDR
>Mature_108_residues
SDTWTFVCASDALLPGEMQTVWDEVTDTPIVVFNLDGALYALEDRCSHEDYELSPGSFDPVAGTIECQLHSARFDIRDGR
PLCAPAYTAVPKFPVKREHDGIWTRDDR

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=74, Percent_Identity=40.5405405405405, Blast_Score=61, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12250; Mature: 12118

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTWTFVCASDALLPGEMQTVWDEVTDTPIVVFNLDGALYALEDRCSHEDYELSPGSFD
CCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC
PVAGTIECQLHSARFDIRDGRPLCAPAYTAVPKFPVKREHDGIWTRDDR
CCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
>Mature Secondary Structure 
SDTWTFVCASDALLPGEMQTVWDEVTDTPIVVFNLDGALYALEDRCSHEDYELSPGSFD
CCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC
PVAGTIECQLHSARFDIRDGRPLCAPAYTAVPKFPVKREHDGIWTRDDR
CCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]