| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243628
Identifier: 21243628
GI number: 21243628
Start: 3406101
End: 3406553
Strand: Reverse
Name: 21243628
Synonym: XAC2901
Alternate gene names: NA
Gene position: 3406553-3406101 (Counterclockwise)
Preceding gene: 21243629
Following gene: 21243627
Centisome position: 65.82
GC content: 54.97
Gene sequence:
>453_bases ATGCCAAAAAGGATCATCACCAAGGCAACGCTCCCAAAGATCATGCGTGAGCTAGATCGCTGGCAAGGCAAGCTCACTTG GCCACTTTTCTGCGAGCGTGTCGCAAAGGTGCTGAACGTCGCAGCGATTTCGAAGCACACGATGTACCTCTACCCCGCCA TCAAAGAGCGGTTTCAGCAGCGACAGAAGGACTTGCGAGAGGCAAGGGATGCACTCCCGCGAGACTTCACGCTAGATTCC GCGACCCGGCGGATTGCTGATCTGGAAGCACAGGTAAAACGGCTAGAAGAGACGAATAACCGGCTGTTAGACCAGTTCCG CAGATGGCAATACAACGCCTATGCGAACAACGTCAGGATGGATCTTCTCGCTTTAGATAAGCCGCTGCCTGAGGTGAACC GCTCAGGACGCCCACGTGGGATCCCGAGGCCTAGGGTGTCCAAAAAGACATGA
Upstream 100 bases:
>100_bases CTCCAGTTCGTCGCGCCCTTATGGATCTTGAGGTGGTGGAGATGCCCTCCATGGAGGCGCTTGGTCCGAACATAATTCCC TTGGCCCTGACCTGATCGCC
Downstream 100 bases:
>100_bases TCGGTTTGCAACCCATTTGGAAGATCTTTCTGTATCTCAGCGGCTTCAAGCAGGGCGCCAACGGGCCGACATCATCTCTA CAAGTTCAAAAATGGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MPKRIITKATLPKIMRELDRWQGKLTWPLFCERVAKVLNVAAISKHTMYLYPAIKERFQQRQKDLREARDALPRDFTLDS ATRRIADLEAQVKRLEETNNRLLDQFRRWQYNAYANNVRMDLLALDKPLPEVNRSGRPRGIPRPRVSKKT
Sequences:
>Translated_150_residues MPKRIITKATLPKIMRELDRWQGKLTWPLFCERVAKVLNVAAISKHTMYLYPAIKERFQQRQKDLREARDALPRDFTLDS ATRRIADLEAQVKRLEETNNRLLDQFRRWQYNAYANNVRMDLLALDKPLPEVNRSGRPRGIPRPRVSKKT >Mature_149_residues PKRIITKATLPKIMRELDRWQGKLTWPLFCERVAKVLNVAAISKHTMYLYPAIKERFQQRQKDLREARDALPRDFTLDSA TRRIADLEAQVKRLEETNNRLLDQFRRWQYNAYANNVRMDLLALDKPLPEVNRSGRPRGIPRPRVSKKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17799; Mature: 17668
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRIITKATLPKIMRELDRWQGKLTWPLFCERVAKVLNVAAISKHTMYLYPAIKERFQQ CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RQKDLREARDALPRDFTLDSATRRIADLEAQVKRLEETNNRLLDQFRRWQYNAYANNVRM HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLALDKPLPEVNRSGRPRGIPRPRVSKKT HHHHHCCCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PKRIITKATLPKIMRELDRWQGKLTWPLFCERVAKVLNVAAISKHTMYLYPAIKERFQQ CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH RQKDLREARDALPRDFTLDSATRRIADLEAQVKRLEETNNRLLDQFRRWQYNAYANNVRM HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLALDKPLPEVNRSGRPRGIPRPRVSKKT HHHHHCCCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA