| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243629
Identifier: 21243629
GI number: 21243629
Start: 3406559
End: 3408409
Strand: Reverse
Name: 21243629
Synonym: XAC2902
Alternate gene names: NA
Gene position: 3408409-3406559 (Counterclockwise)
Preceding gene: 21243630
Following gene: 21243628
Centisome position: 65.86
GC content: 57.32
Gene sequence:
>1851_bases ATGGGTGATGTCGTCCAATTCGTGCCTCGCGCTGAGCGCGATGCAAGTAAAAATCTAGCCGAGTTCATTCGCTTGGCAAA AGAAAGCCTGACAGCATTCGCGAATGGTGGTGCTTGGGATCGCGACAAGTGGCAGCAAAACGAAACCGTAGTTGTATTCG CGACGAAGACTTCGCCTCTGAACTCATACTCCTTTACGCCCTTCGCCGAACCATTCATGCAGTTCGCAAAGGCATACGTT AGATACCGGTATAGCCACAGACCGGTCAAGAGCTTGGCAATGATGCTCCAGGCGCTTCGCTGCGTGGAGGCAGGGTTGCT GGCGTCTTGTAGCCGAGCAGATGTCGGCCTCCTGAGTGGTGCGGTAATGGACGTTTGCGCCAACAAGTGCAAGGAGTTCT ACTCCAGCGAGGATGTGCACCACAAAACCGGGCTCCAACTTCAAGCCGTATTCGACTTCTTGCGTGAGAAGAGTCTTGTC TTGTCGTTGCCAGCTTGGAAGTCTCCTTTCAAGAAGCCGGTCATCCTGACCGAGGATCTCGGCGAAGCAGGGCAGGCCCA TCGCATGGCAAAGCTTCCCTCTAATGAGGCAATGCTCGCAGTTGCTGACGTGTTCGCCCAGGCCGACGATCGAGAGAGCC AGTTCTACTCGTCAATCTTCATCCTGCTGATGGCAGCGCCCGGCCGCATCTCCGAAGTCCTCAAGCTGCCTACTGATTGC ATTCAATGGGAGGCGGACGAAGGTGGGAAGCTTCAAATGTTCCTGCGCTGGCATGCGGTCAAGGGCAAAGGCGCGACGAA GAAGTGGGTTGTACCCGCCATGCATGACGTCGTGCAAGAGGCTGTCCGGCGGTTGGTCGAAGTCGGTGATCCGGCACGTG AGGTAGCAAAGACGGCGTTCGAAGGCTCAGCGCAATTGTCGAGAGAGGCCGGCGCGTCCAACCTCATCAAAGAGTTTGGT GGCTTTTACTGGCCATTCTTGGATGAGAAGAAGGTGCTGAAGGCTTGGGACGCACTATGCCTGCACCGAGAGAATGAGTT CAACCGCGAGAGGGAAATCAAGCCAAACTCATGGCGGATTCCCGACGCTAACGAGGTGAACAGGCGCTTGGGCGCCGGCC ACCGATTATCGCTATTTGATCGCATGGGTCTGCGGAATTCGGATGGCACGCGCATCGTGTTGACCTCGCACCAGCTCCGT CATTGGCTCAGCACGATGTCAGAGCGGGCGGGCATGGACGACTATACCCTGGCGCAATGGGCTGGCCGTGCAAAGGTTTC CGACAATCGTCATTACGACCATCGCTCGCCCGAGGAGCGCCTGGAGGCTGCCCGAGGGCTGCTTCCGATGCAGCTTGCTC CATTGCTCGAGCGCATCAAGCATCGTCAGCCGGTGACATATCAGGAGCTTGGGGTTGATCGGCTAGGAACGGCCAAAGCA ACGCTCTACGGCATGTGCGTGCACGACTACGCCATGGCGCCGTGCCAGAAACAGCGCGAGTGCATGACCTGCAAGGAGCA TGTTTGCGTCAAGGGCGATCACGTTACGCTAGATCGGATTCGTCTCTTGGAAACGCAGACGGAAAAACTGCTCCAACACG CCATGAAGGCTCATGATGATGGCGACTTTGGCGCCGACCGCTGGGTTGACAATCACAAGTGGAAGCTCGCGCACGTCAAG GCAATGCGGATGGCCTTGGAGCATCCCAATATTCCGGAGGGAGCGGTCCTCAGGGTCCCGGACGGGCACGATCCCTCTCC AGTTCGTCGCGCCCTTATGGATCTTGAGGTGGTGGAGATGCCCTCCATGGAGGCGCTTGGTCCGAACATAATTCCCTTGG CCCTGACCTGA
Upstream 100 bases:
>100_bases GCAAATGACCAGTTGATCCTCGCCGTCGAGCATTGCGTTTCGATGTGCAAGAAGGCTAGGGATCGGATGCCTGAAGCGAC TTTGTTAGAGGCGGACGCCC
Downstream 100 bases:
>100_bases TCGCCATGCCAAAAAGGATCATCACCAAGGCAACGCTCCCAAAGATCATGCGTGAGCTAGATCGCTGGCAAGGCAAGCTC ACTTGGCCACTTTTCTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Integrase Family Protein; Phage Integrase; Transposase B Transposon Tn
Number of amino acids: Translated: 616; Mature: 615
Protein sequence:
>616_residues MGDVVQFVPRAERDASKNLAEFIRLAKESLTAFANGGAWDRDKWQQNETVVVFATKTSPLNSYSFTPFAEPFMQFAKAYV RYRYSHRPVKSLAMMLQALRCVEAGLLASCSRADVGLLSGAVMDVCANKCKEFYSSEDVHHKTGLQLQAVFDFLREKSLV LSLPAWKSPFKKPVILTEDLGEAGQAHRMAKLPSNEAMLAVADVFAQADDRESQFYSSIFILLMAAPGRISEVLKLPTDC IQWEADEGGKLQMFLRWHAVKGKGATKKWVVPAMHDVVQEAVRRLVEVGDPAREVAKTAFEGSAQLSREAGASNLIKEFG GFYWPFLDEKKVLKAWDALCLHRENEFNREREIKPNSWRIPDANEVNRRLGAGHRLSLFDRMGLRNSDGTRIVLTSHQLR HWLSTMSERAGMDDYTLAQWAGRAKVSDNRHYDHRSPEERLEAARGLLPMQLAPLLERIKHRQPVTYQELGVDRLGTAKA TLYGMCVHDYAMAPCQKQRECMTCKEHVCVKGDHVTLDRIRLLETQTEKLLQHAMKAHDDGDFGADRWVDNHKWKLAHVK AMRMALEHPNIPEGAVLRVPDGHDPSPVRRALMDLEVVEMPSMEALGPNIIPLALT
Sequences:
>Translated_616_residues MGDVVQFVPRAERDASKNLAEFIRLAKESLTAFANGGAWDRDKWQQNETVVVFATKTSPLNSYSFTPFAEPFMQFAKAYV RYRYSHRPVKSLAMMLQALRCVEAGLLASCSRADVGLLSGAVMDVCANKCKEFYSSEDVHHKTGLQLQAVFDFLREKSLV LSLPAWKSPFKKPVILTEDLGEAGQAHRMAKLPSNEAMLAVADVFAQADDRESQFYSSIFILLMAAPGRISEVLKLPTDC IQWEADEGGKLQMFLRWHAVKGKGATKKWVVPAMHDVVQEAVRRLVEVGDPAREVAKTAFEGSAQLSREAGASNLIKEFG GFYWPFLDEKKVLKAWDALCLHRENEFNREREIKPNSWRIPDANEVNRRLGAGHRLSLFDRMGLRNSDGTRIVLTSHQLR HWLSTMSERAGMDDYTLAQWAGRAKVSDNRHYDHRSPEERLEAARGLLPMQLAPLLERIKHRQPVTYQELGVDRLGTAKA TLYGMCVHDYAMAPCQKQRECMTCKEHVCVKGDHVTLDRIRLLETQTEKLLQHAMKAHDDGDFGADRWVDNHKWKLAHVK AMRMALEHPNIPEGAVLRVPDGHDPSPVRRALMDLEVVEMPSMEALGPNIIPLALT >Mature_615_residues GDVVQFVPRAERDASKNLAEFIRLAKESLTAFANGGAWDRDKWQQNETVVVFATKTSPLNSYSFTPFAEPFMQFAKAYVR YRYSHRPVKSLAMMLQALRCVEAGLLASCSRADVGLLSGAVMDVCANKCKEFYSSEDVHHKTGLQLQAVFDFLREKSLVL SLPAWKSPFKKPVILTEDLGEAGQAHRMAKLPSNEAMLAVADVFAQADDRESQFYSSIFILLMAAPGRISEVLKLPTDCI QWEADEGGKLQMFLRWHAVKGKGATKKWVVPAMHDVVQEAVRRLVEVGDPAREVAKTAFEGSAQLSREAGASNLIKEFGG FYWPFLDEKKVLKAWDALCLHRENEFNREREIKPNSWRIPDANEVNRRLGAGHRLSLFDRMGLRNSDGTRIVLTSHQLRH WLSTMSERAGMDDYTLAQWAGRAKVSDNRHYDHRSPEERLEAARGLLPMQLAPLLERIKHRQPVTYQELGVDRLGTAKAT LYGMCVHDYAMAPCQKQRECMTCKEHVCVKGDHVTLDRIRLLETQTEKLLQHAMKAHDDGDFGADRWVDNHKWKLAHVKA MRMALEHPNIPEGAVLRVPDGHDPSPVRRALMDLEVVEMPSMEALGPNIIPLALT
Specific function: Unknown
COG id: COG4688
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69579; Mature: 69448
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVVQFVPRAERDASKNLAEFIRLAKESLTAFANGGAWDRDKWQQNETVVVFATKTSPL CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCCCC NSYSFTPFAEPFMQFAKAYVRYRYSHRPVKSLAMMLQALRCVEAGLLASCSRADVGLLSG CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AVMDVCANKCKEFYSSEDVHHKTGLQLQAVFDFLREKSLVLSLPAWKSPFKKPVILTEDL HHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCC GEAGQAHRMAKLPSNEAMLAVADVFAQADDRESQFYSSIFILLMAAPGRISEVLKLPTDC CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHH IQWEADEGGKLQMFLRWHAVKGKGATKKWVVPAMHDVVQEAVRRLVEVGDPAREVAKTAF HEECCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EGSAQLSREAGASNLIKEFGGFYWPFLDEKKVLKAWDALCLHRENEFNREREIKPNSWRI CCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCC PDANEVNRRLGAGHRLSLFDRMGLRNSDGTRIVLTSHQLRHWLSTMSERAGMDDYTLAQW CCHHHHHHHHCCCCEEHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHH AGRAKVSDNRHYDHRSPEERLEAARGLLPMQLAPLLERIKHRQPVTYQELGVDRLGTAKA CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHH TLYGMCVHDYAMAPCQKQRECMTCKEHVCVKGDHVTLDRIRLLETQTEKLLQHAMKAHDD HHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCC GDFGADRWVDNHKWKLAHVKAMRMALEHPNIPEGAVLRVPDGHDPSPVRRALMDLEVVEM CCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCC PSMEALGPNIIPLALT CCHHHCCCCCEEEEEC >Mature Secondary Structure GDVVQFVPRAERDASKNLAEFIRLAKESLTAFANGGAWDRDKWQQNETVVVFATKTSPL CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEECCCCC NSYSFTPFAEPFMQFAKAYVRYRYSHRPVKSLAMMLQALRCVEAGLLASCSRADVGLLSG CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH AVMDVCANKCKEFYSSEDVHHKTGLQLQAVFDFLREKSLVLSLPAWKSPFKKPVILTEDL HHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCC GEAGQAHRMAKLPSNEAMLAVADVFAQADDRESQFYSSIFILLMAAPGRISEVLKLPTDC CCCHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCHHH IQWEADEGGKLQMFLRWHAVKGKGATKKWVVPAMHDVVQEAVRRLVEVGDPAREVAKTAF HEECCCCCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH EGSAQLSREAGASNLIKEFGGFYWPFLDEKKVLKAWDALCLHRENEFNREREIKPNSWRI CCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCC PDANEVNRRLGAGHRLSLFDRMGLRNSDGTRIVLTSHQLRHWLSTMSERAGMDDYTLAQW CCHHHHHHHHCCCCEEHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHH AGRAKVSDNRHYDHRSPEERLEAARGLLPMQLAPLLERIKHRQPVTYQELGVDRLGTAKA CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHH TLYGMCVHDYAMAPCQKQRECMTCKEHVCVKGDHVTLDRIRLLETQTEKLLQHAMKAHDD HHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCEEHHHHHHHHHHHHHHHHHHHHCCCC GDFGADRWVDNHKWKLAHVKAMRMALEHPNIPEGAVLRVPDGHDPSPVRRALMDLEVVEM CCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCC PSMEALGPNIIPLALT CCHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA