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The map label for this gene is yogA [H]

Identifier: 21243623

GI number: 21243623

Start: 3396136

End: 3397143

Strand: Reverse

Name: yogA [H]

Synonym: XAC2896

Alternate gene names: 21243623

Gene position: 3397143-3396136 (Counterclockwise)

Preceding gene: 21243625

Following gene: 21243622

Centisome position: 65.64

GC content: 65.67

Gene sequence:

>1008_bases
ATGCAAGCCATTCGTCTTCGCCATCCGGCTGCCATCGCATCGCTGCAGTCGGTTGCATTGCCCGATCCGGGGCAGCCTGC
ACGCGGTCAGATCCGCGTGCGCCTGCATGCCAGTTCGCTCAATTTTCATGATCTGGGCGTGGTGCTCGGGCAGATGCCAA
CCGCAGACGGGCGTATTCCGATGTCCGATGGCGCAGGCGTGGTGGAAGCGGTCGGGCCGGAGGTTGACGAGTTCGCAGTG
GGCGATCAGGTGGTGTCCACCTTCTTCCCGCAGTGGCTGGACGGCGAGCCGTTGCACGCCGGTTTTGCCACCACTCCAGG
CGACGGCGTCGATGGCTATGCGCGCTCGGCGGTCGTCGCCGATGCACGGGCATTCACCCACGCACCCCGTGGTTACAGCC
ACGCCGAGGCTGCGACGCTGACCACCGCCGGCGTCACCGCGTGGCGTGCACTGGCAGTCAACGGCGGGCTCAAGGCCGGC
GACAGCGTGCTGGTACTGGGCACCGGTGGCGTGTCGATCTTTGCGCTGCAATTGGCCAAAGCGATGGGCGCGCGCGTGAT
CGCCACGTCCTCATCCGACGAGAAACTGGAGAAGGTGCGAGCGCTCGGTGCCGACCACGTCATCAACTATCGACAGCATC
CCGAATGGTCGGCGCAGGTGCTGGACATCACCGAAGGACGTGGGGTGGACCATGTGGTCGAGGTCGGTGGGCCGGGCACG
CTGACGCAATCGATCCGTGCAGCGCGCGTAGGTGGGCATATCGCCTTGATCGGCGTTTTGACCGGTGCCGGAGGGCCGGT
TCCGACTGCCGAAATGATGGGGCGCCAGCAACGCCTGCAGGGATTGGTCGTCGGCAGCCGCAAGCATCAACAGGACCTGG
TGCGCGCACTCGACAGCTTGCCGCTGCGGCCGGTGATCGATCGCAGCTTCGCGCTGGATGAGATCGGTGAAGCCTTCGCG
CTGCAGAAGTCCGGTGGCCACCTCGGCAAGATCGCGCTGGAGTTCTGA

Upstream 100 bases:

>100_bases
CCTCAACGCGCACGGCGACAGATGTCAGAGCCAGCTCGACTGCGGCTGCATAACGGGCAGCATGCTATGCCGAGCACTGA
ATCACGCTCAGGAGTTCTCC

Downstream 100 bases:

>100_bases
TCCAGCCCGCGGCACCGAGCGTCGGTGATGCTCCGCACCGCCGACGCGCGAATTCACTATTTCGACGTGTGCAAAGGCCG
CCGCCTGCATGACGTTGCTG

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIPMSDGAGVVEAVGPEVDEFAV
GDQVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVADARAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAG
DSVLVLGTGGVSIFALQLAKAMGARVIATSSSDEKLEKVRALGADHVINYRQHPEWSAQVLDITEGRGVDHVVEVGGPGT
LTQSIRAARVGGHIALIGVLTGAGGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSLPLRPVIDRSFALDEIGEAFA
LQKSGGHLGKIALEF

Sequences:

>Translated_335_residues
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIPMSDGAGVVEAVGPEVDEFAV
GDQVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVADARAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAG
DSVLVLGTGGVSIFALQLAKAMGARVIATSSSDEKLEKVRALGADHVINYRQHPEWSAQVLDITEGRGVDHVVEVGGPGT
LTQSIRAARVGGHIALIGVLTGAGGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSLPLRPVIDRSFALDEIGEAFA
LQKSGGHLGKIALEF
>Mature_335_residues
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIPMSDGAGVVEAVGPEVDEFAV
GDQVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVADARAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAG
DSVLVLGTGGVSIFALQLAKAMGARVIATSSSDEKLEKVRALGADHVINYRQHPEWSAQVLDITEGRGVDHVVEVGGPGT
LTQSIRAARVGGHIALIGVLTGAGGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSLPLRPVIDRSFALDEIGEAFA
LQKSGGHLGKIALEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=355, Percent_Identity=27.887323943662, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI22538444, Length=355, Percent_Identity=27.887323943662, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI194239674, Length=332, Percent_Identity=25.9036144578313, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI13236495, Length=332, Percent_Identity=25.9036144578313, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI47519420, Length=356, Percent_Identity=26.685393258427, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI28557745, Length=224, Percent_Identity=31.6964285714286, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI194239676, Length=330, Percent_Identity=25.7575757575758, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI156627571, Length=332, Percent_Identity=25.9036144578313, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI87082125, Length=348, Percent_Identity=27.0114942528736, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87081918, Length=325, Percent_Identity=27.0769230769231, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790485, Length=262, Percent_Identity=27.8625954198473, Blast_Score=65, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17507255, Length=324, Percent_Identity=27.4691358024691, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71988145, Length=342, Percent_Identity=25.1461988304094, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324486, Length=311, Percent_Identity=26.3665594855305, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6323729, Length=335, Percent_Identity=25.9701492537313, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6323961, Length=311, Percent_Identity=25.7234726688103, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6319621, Length=354, Percent_Identity=25.9887005649718, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221330659, Length=233, Percent_Identity=26.6094420600858, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI19920632, Length=233, Percent_Identity=26.6094420600858, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581345, Length=233, Percent_Identity=25.7510729613734, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34913; Mature: 34913

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIP
CCCEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCEE
MSDGAGVVEAVGPEVDEFAVGDQVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVA
CCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
DARAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAGDSVLVLGTGGVSIFALQLAK
HHHHHHCCCCCCCCCHHHEEEHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHHHHHHHH
AMGARVIATSSSDEKLEKVRALGADHVINYRQHPEWSAQVLDITEGRGVDHVVEVGGPGT
HHCCEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCH
LTQSIRAARVGGHIALIGVLTGAGGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSL
HHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCHHHHHHEEEECCCHHHHHHHHHHHCC
PLRPVIDRSFALDEIGEAFALQKSGGHLGKIALEF
CCCHHHCCHHHHHHHHHHHEEECCCCCEEEEEEEC
>Mature Secondary Structure
MQAIRLRHPAAIASLQSVALPDPGQPARGQIRVRLHASSLNFHDLGVVLGQMPTADGRIP
CCCEECCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCEE
MSDGAGVVEAVGPEVDEFAVGDQVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVA
CCCCCCCHHHCCCCHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
DARAFTHAPRGYSHAEAATLTTAGVTAWRALAVNGGLKAGDSVLVLGTGGVSIFALQLAK
HHHHHHCCCCCCCCCHHHEEEHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHHHHHHHH
AMGARVIATSSSDEKLEKVRALGADHVINYRQHPEWSAQVLDITEGRGVDHVVEVGGPGT
HHCCEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCH
LTQSIRAARVGGHIALIGVLTGAGGPVPTAEMMGRQQRLQGLVVGSRKHQQDLVRALDSL
HHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHCHHHHHHEEEECCCHHHHHHHHHHHCC
PLRPVIDRSFALDEIGEAFALQKSGGHLGKIALEF
CCCHHHCCHHHHHHHHHHHEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]