| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phlA [H]
Identifier: 21243612
GI number: 21243612
Start: 3384874
End: 3386061
Strand: Direct
Name: phlA [H]
Synonym: XAC2885
Alternate gene names: 21243612
Gene position: 3384874-3386061 (Clockwise)
Preceding gene: 21243611
Following gene: 77748680
Centisome position: 65.4
GC content: 64.39
Gene sequence:
>1188_bases ATGAGCCCGTCAGAATCCTCTTCTTCTTCCACCCCGTTCGCAGAATCGATGCGCGGGCAACAACCGCACCCGGAGGACCG CCAGTTCCCCGCGATGCTGCAAGACCTCTACGCCACCGCCGCCCAACGACGCGAAGGCGGCGCCGAAACCTTTGCCGCCT TGCCCAACGGCTGGTGGCGCATGGACGACCGCGCGCTGCAGCAGGCAGGCATCGACCCTGCCCTGCTGCACGACGCCAAG AGCGGCTTCGACGCCGCGTTCTATCGCAATGATCAGGGGCAGGTGGTGCTGGGCTTCTGCGGCACCGACGAAGGCAAGGA TTGGAAGCACAACATCGGCCAGGGCCTGGGCTTGGACGATGCGCAATACGCTTCGGCGATCCAGCTCGGCAGCCAGGCCA AACAGGCGTTCGGCGACCAGGTGGTGATCAGCGGGCATTCGCTGGGTGGCGGCCTGGCCGCGGCGTCGGCAATGGTCAAC GACATTCCGGCGGTGACCTATAACGCTGCCGGCGTCAACGACCGCACGCTGGAGCGCCAAGGTCTGGATGCATCGGCGGC CAAGGATTACGCCAATAGCGAATTGATCCGCGGCTACCACGTCAAGAACGAAATCCTGACCCATCTGCAGGAAGACAGCA TCCCGCTCAAATGGGCCATGCCCAATGCGGCCGGTCATCAGATCGAACTGCCGGAGCCGGACCCGTTGTCCTTCGGCCAG CGTCTGGTGCCGGGCATGATGCTCAAGCATCGGCTGGATCTGCACGGCATCGATTCGGTGATGAAGGCGCAGGACATGCA GTTGCAGGGCCAGGCGCGCGGCAACGCATTGCAGCCCGGCAGCCAGCTGTTCAACGACGCGGTAGTGAAACTGGATGGAC AACGCGACCGCCTGGGTCTGCGCGACGACACCGCGTTTCTCAATACCGCCGCCAGCGTGGCCGCGCGTGCAGGCAACGAT GGCCTGCAGCGCATCGATCACCTGGTGCCCAACCGTGATGGCGACAGCCTGATCGCGGTTCAGGGCCGCATGGACGACCC GGCCCATCTGCGCAGCCATGTGCAGACGGCGTCCGCAGCCAACGAGCCGGCCCAGACCAATGTCAGCCAGTTGCAACAGC ACAATCAGCAACACACCCAGCAGCCGCCGCAACAGCAGCAAGAGCAGCGTCGGGTGATTCAGCAGTAA
Upstream 100 bases:
>100_bases GGTGAGATCGGAGGTGCGCGCGTGGTTGAACGCCCACAACATTCCCGTGGAAAGCAGCCGCTAAGCGCGCTTTTCGCATG ACGAACGCAAGGAGCCGCGC
Downstream 100 bases:
>100_bases TGCTCCGGTGGCCCGCGCACTGCCGCGGGCCACTCTTTGTCAACGCACGCGGCCGGCGACAGCGCGTCAAGGCTTGCGCA TGATCGCTGCCGGCGTCGCG
Product: phospholipase A1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSPSESSSSSTPFAESMRGQQPHPEDRQFPAMLQDLYATAAQRREGGAETFAALPNGWWRMDDRALQQAGIDPALLHDAK SGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGLDDAQYASAIQLGSQAKQAFGDQVVISGHSLGGGLAAASAMVN DIPAVTYNAAGVNDRTLERQGLDASAAKDYANSELIRGYHVKNEILTHLQEDSIPLKWAMPNAAGHQIELPEPDPLSFGQ RLVPGMMLKHRLDLHGIDSVMKAQDMQLQGQARGNALQPGSQLFNDAVVKLDGQRDRLGLRDDTAFLNTAASVAARAGND GLQRIDHLVPNRDGDSLIAVQGRMDDPAHLRSHVQTASAANEPAQTNVSQLQQHNQQHTQQPPQQQQEQRRVIQQ
Sequences:
>Translated_395_residues MSPSESSSSSTPFAESMRGQQPHPEDRQFPAMLQDLYATAAQRREGGAETFAALPNGWWRMDDRALQQAGIDPALLHDAK SGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGLDDAQYASAIQLGSQAKQAFGDQVVISGHSLGGGLAAASAMVN DIPAVTYNAAGVNDRTLERQGLDASAAKDYANSELIRGYHVKNEILTHLQEDSIPLKWAMPNAAGHQIELPEPDPLSFGQ RLVPGMMLKHRLDLHGIDSVMKAQDMQLQGQARGNALQPGSQLFNDAVVKLDGQRDRLGLRDDTAFLNTAASVAARAGND GLQRIDHLVPNRDGDSLIAVQGRMDDPAHLRSHVQTASAANEPAQTNVSQLQQHNQQHTQQPPQQQQEQRRVIQQ >Mature_394_residues SPSESSSSSTPFAESMRGQQPHPEDRQFPAMLQDLYATAAQRREGGAETFAALPNGWWRMDDRALQQAGIDPALLHDAKS GFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGLDDAQYASAIQLGSQAKQAFGDQVVISGHSLGGGLAAASAMVND IPAVTYNAAGVNDRTLERQGLDASAAKDYANSELIRGYHVKNEILTHLQEDSIPLKWAMPNAAGHQIELPEPDPLSFGQR LVPGMMLKHRLDLHGIDSVMKAQDMQLQGQARGNALQPGSQLFNDAVVKLDGQRDRLGLRDDTAFLNTAASVAARAGNDG LQRIDHLVPNRDGDSLIAVQGRMDDPAHLRSHVQTASAANEPAQTNVSQLQQHNQQHTQQPPQQQQEQRRVIQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =3.1.1.32 [H]
Molecular weight: Translated: 42879; Mature: 42748
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSESSSSSTPFAESMRGQQPHPEDRQFPAMLQDLYATAAQRREGGAETFAALPNGWWR CCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC MDDRALQQAGIDPALLHDAKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGLDD CCHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCH AQYASAIQLGSQAKQAFGDQVVISGHSLGGGLAAASAMVNDIPAVTYNAAGVNDRTLERQ HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHC GLDASAAKDYANSELIRGYHVKNEILTHLQEDSIPLKWAMPNAAGHQIELPEPDPLSFGQ CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCHHHHH RLVPGMMLKHRLDLHGIDSVMKAQDMQLQGQARGNALQPGSQLFNDAVVKLDGQRDRLGL HHHHHHHHHHHCCHHHHHHHHHHHHCHHCCCCCCCCCCCHHHHHCCHHEEECCCCCCCCC RDDTAFLNTAASVAARAGNDGLQRIDHLVPNRDGDSLIAVQGRMDDPAHLRSHVQTASAA CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC NEPAQTNVSQLQQHNQQHTQQPPQQQQEQRRVIQQ CCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure SPSESSSSSTPFAESMRGQQPHPEDRQFPAMLQDLYATAAQRREGGAETFAALPNGWWR CCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCC MDDRALQQAGIDPALLHDAKSGFDAAFYRNDQGQVVLGFCGTDEGKDWKHNIGQGLGLDD CCHHHHHHCCCCHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCH AQYASAIQLGSQAKQAFGDQVVISGHSLGGGLAAASAMVNDIPAVTYNAAGVNDRTLERQ HHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHC GLDASAAKDYANSELIRGYHVKNEILTHLQEDSIPLKWAMPNAAGHQIELPEPDPLSFGQ CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCHHHHH RLVPGMMLKHRLDLHGIDSVMKAQDMQLQGQARGNALQPGSQLFNDAVVKLDGQRDRLGL HHHHHHHHHHHCCHHHHHHHHHHHHCHHCCCCCCCCCCCHHHHHCCHHEEECCCCCCCCC RDDTAFLNTAASVAARAGNDGLQRIDHLVPNRDGDSLIAVQGRMDDPAHLRSHVQTASAA CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHC NEPAQTNVSQLQQHNQQHTQQPPQQQQEQRRVIQQ CCCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3056919; 8316077; 1640837 [H]