| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aspA [H]
Identifier: 21243560
GI number: 21243560
Start: 3322511
End: 3324244
Strand: Direct
Name: aspA [H]
Synonym: XAC2833
Alternate gene names: 21243560
Gene position: 3322511-3324244 (Clockwise)
Preceding gene: 21243559
Following gene: 21243561
Centisome position: 64.2
GC content: 61.65
Gene sequence:
>1734_bases ATGCTGCGGCAACCGGTGTCGATGCATCGATCAGGACGACGCAGAACACACGCAATGCCAGCGACCCGTTGTTCCGCTAC CAATGGCATCCAAGGCCAGCCGGTGTTCGGCGACCAACGTCCGCGGCCAGGCGTCGATCTGGATGTGGACATCCTGCACA CGCTCGGCATTCGCGGAGCCGGAGTCAAGGTGGCGGTCATCGATGATGGGCTCGAGATTGCGCATGAGGATCTCGTCGAC AACATCGTTGCCGGCGGCTCGCATAACTTCTTGAATGGTTCCAACGATCCGACGCCGCCTGCGGACGAAATCGACAATGA CCACGGCACCGCGGTCGCCGGCATCATCGCGGCACGTGGATGGAATGGTCTGGGTGGACGCGGTGTTGCACCAGAGGCGA ATGTGGCTGGCTTCAACGCACTTTCCATACTCGATGGCAGCAAGCAATACGTGGATATCCGTTACTCCTGGGGCGATGGC GCAGAAGCCCGTGCGATGGACGTGTACAACAACAGCTTCGGCATCTCGACAGCGGTCTATCCATTCAGCGATCTCGACGA GCAGCGCTCTCTGGAGAAACTGATGCGTGCCCAGCGTGGTGGCAAGGGCGGCATCTACGTCAAGGCAGCTGGCAATGATT TCAATACGCTGCTCGATGTGGATGCACAGGGCAAGCTGATCGATCGTTGCAGCGACCAGACCCGGCAACTCGGCGTCGCC TGCAGCAGCGCCAATATCGACAACCTCAACAGTCTGACCACCATGATCGTGGTGGGTGCGGTCAACGCCAACGGCGTGCG TGCGAGCTATTCATCGCCCGGATCCGCGTTGTGGGTGTCCGGTCTCTCCGGCGAATTTGGGTTCCAGCGTCGCTTCGACC CGCATCCTGAGACTTACAGTCCGTTGTATACACTGCTCGCTGCGCAGGGCCCGCAACCATTCTTCTCACCGGCGATCGTC ACGACCGACCTGAGTGGATGCGCTGCAGGCAATAATCGCGATCGGACGCGCGCGCCGCAGAATGCGCTGGATACCAGCCA CTCCAAAATCGATGCCTCGTGCAACTACAGCGCACGCATGAATGGCACCTCCGCCTCCGCACCAACGGTTGCAGGCGTCG CGGCGCTGATGCTGGGCGCCAACCCGCAGCTGACGCTGCGCGATGTCAAATACATCCTGGCAACGACGGCGGTGCAGGTC GATCCCCATCAGGCCAAGGCGTTCTACAAGGACGCCGTGATCGAGCCCGCCTGGATCACCAACGCGGCCGGCCACCGTTT CAGCAACTGGTATGGCTTCGGTTTGGTGGATGCAGCCGCGGCGGTGGAGCGTGCGATGCATTTCACTCCGCTGCCGGCGA TGCAAGACACCGAGTGGACCGTCTATGACGGCGAGAGCAGCACCATCGGCGGTATCGGCTCGCCCGCGCGATTAGCGATC GACATCAAGCAGTCCTTCAAGGTGGAAGGCGTACAGCTGTACTTCGCAGGGACGCACAAGCATCCTCGCCAACTGCGCGC CGTGCTGGTATCGCCCAGCGGCACCCGCAGCACCGTGATGACGCCGTTCTCCACGCTCGACCCGGGTGATGGCTTCGTGG TCTTCCTGACCTCCAGCAATGCCTTCCTGGACGAGGCGGCAGCCGGTCGCTGGACACTGGAGGTGGACGACATGCTCGCC GACAACGGCAAGGAACAACTGCAGGAATTCGAAATGCGCGTGGTGGGCCACTGA
Upstream 100 bases:
>100_bases CCCCATTACCGATACCATCCCATGACAACCTCTCCCCTGCGGCGATTGCCGCTGCTGTGCGCGTGCCTACTGGCGCTCGG ACCCTTCTCGCTGACCGCCG
Downstream 100 bases:
>100_bases CATGAAAACTTCTCTGATCACACTGCTGTGCGTCGTTGCCGCCAGCATGTCTGCACCCGTCTCGGCACAGGTGTTCGATC GCGCCCGCCTGCGTGCTGCC
Product: extracellular serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MLRQPVSMHRSGRRRTHAMPATRCSATNGIQGQPVFGDQRPRPGVDLDVDILHTLGIRGAGVKVAVIDDGLEIAHEDLVD NIVAGGSHNFLNGSNDPTPPADEIDNDHGTAVAGIIAARGWNGLGGRGVAPEANVAGFNALSILDGSKQYVDIRYSWGDG AEARAMDVYNNSFGISTAVYPFSDLDEQRSLEKLMRAQRGGKGGIYVKAAGNDFNTLLDVDAQGKLIDRCSDQTRQLGVA CSSANIDNLNSLTTMIVVGAVNANGVRASYSSPGSALWVSGLSGEFGFQRRFDPHPETYSPLYTLLAAQGPQPFFSPAIV TTDLSGCAAGNNRDRTRAPQNALDTSHSKIDASCNYSARMNGTSASAPTVAGVAALMLGANPQLTLRDVKYILATTAVQV DPHQAKAFYKDAVIEPAWITNAAGHRFSNWYGFGLVDAAAAVERAMHFTPLPAMQDTEWTVYDGESSTIGGIGSPARLAI DIKQSFKVEGVQLYFAGTHKHPRQLRAVLVSPSGTRSTVMTPFSTLDPGDGFVVFLTSSNAFLDEAAAGRWTLEVDDMLA DNGKEQLQEFEMRVVGH
Sequences:
>Translated_577_residues MLRQPVSMHRSGRRRTHAMPATRCSATNGIQGQPVFGDQRPRPGVDLDVDILHTLGIRGAGVKVAVIDDGLEIAHEDLVD NIVAGGSHNFLNGSNDPTPPADEIDNDHGTAVAGIIAARGWNGLGGRGVAPEANVAGFNALSILDGSKQYVDIRYSWGDG AEARAMDVYNNSFGISTAVYPFSDLDEQRSLEKLMRAQRGGKGGIYVKAAGNDFNTLLDVDAQGKLIDRCSDQTRQLGVA CSSANIDNLNSLTTMIVVGAVNANGVRASYSSPGSALWVSGLSGEFGFQRRFDPHPETYSPLYTLLAAQGPQPFFSPAIV TTDLSGCAAGNNRDRTRAPQNALDTSHSKIDASCNYSARMNGTSASAPTVAGVAALMLGANPQLTLRDVKYILATTAVQV DPHQAKAFYKDAVIEPAWITNAAGHRFSNWYGFGLVDAAAAVERAMHFTPLPAMQDTEWTVYDGESSTIGGIGSPARLAI DIKQSFKVEGVQLYFAGTHKHPRQLRAVLVSPSGTRSTVMTPFSTLDPGDGFVVFLTSSNAFLDEAAAGRWTLEVDDMLA DNGKEQLQEFEMRVVGH >Mature_577_residues MLRQPVSMHRSGRRRTHAMPATRCSATNGIQGQPVFGDQRPRPGVDLDVDILHTLGIRGAGVKVAVIDDGLEIAHEDLVD NIVAGGSHNFLNGSNDPTPPADEIDNDHGTAVAGIIAARGWNGLGGRGVAPEANVAGFNALSILDGSKQYVDIRYSWGDG AEARAMDVYNNSFGISTAVYPFSDLDEQRSLEKLMRAQRGGKGGIYVKAAGNDFNTLLDVDAQGKLIDRCSDQTRQLGVA CSSANIDNLNSLTTMIVVGAVNANGVRASYSSPGSALWVSGLSGEFGFQRRFDPHPETYSPLYTLLAAQGPQPFFSPAIV TTDLSGCAAGNNRDRTRAPQNALDTSHSKIDASCNYSARMNGTSASAPTVAGVAALMLGANPQLTLRDVKYILATTAVQV DPHQAKAFYKDAVIEPAWITNAAGHRFSNWYGFGLVDAAAAVERAMHFTPLPAMQDTEWTVYDGESSTIGGIGSPARLAI DIKQSFKVEGVQLYFAGTHKHPRQLRAVLVSPSGTRSTVMTPFSTLDPGDGFVVFLTSSNAFLDEAAAGRWTLEVDDMLA DNGKEQLQEFEMRVVGH
Specific function: Agent of furonculosis [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Homo sapiens, GI4505577, Length=556, Percent_Identity=27.3381294964029, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI20336180, Length=556, Percent_Identity=27.3381294964029, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI20336184, Length=556, Percent_Identity=27.6978417266187, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI20336182, Length=556, Percent_Identity=27.6978417266187, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI27894285, Length=540, Percent_Identity=27.037037037037, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI20336190, Length=540, Percent_Identity=27.037037037037, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI20336188, Length=540, Percent_Identity=27.037037037037, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI4505579, Length=571, Percent_Identity=26.0945709281961, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI20336244, Length=550, Percent_Identity=26.7272727272727, Blast_Score=116, Evalue=6e-26, Organism=Homo sapiens, GI76443679, Length=532, Percent_Identity=26.5037593984962, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI20336242, Length=536, Percent_Identity=26.4925373134328, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI295424143, Length=536, Percent_Identity=26.4925373134328, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI20336248, Length=507, Percent_Identity=24.65483234714, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI299523015, Length=324, Percent_Identity=29.6296296296296, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI20336246, Length=324, Percent_Identity=29.6296296296296, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI295424145, Length=207, Percent_Identity=31.4009661835749, Blast_Score=69, Evalue=8e-12, Organism=Caenorhabditis elegans, GI25141268, Length=557, Percent_Identity=28.7253141831239, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71988321, Length=535, Percent_Identity=25.7943925233645, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71988297, Length=535, Percent_Identity=25.7943925233645, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71988315, Length=535, Percent_Identity=25.7943925233645, Blast_Score=112, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71988301, Length=532, Percent_Identity=25, Blast_Score=112, Evalue=7e-25, Organism=Caenorhabditis elegans, GI71988308, Length=532, Percent_Identity=24.4360902255639, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71988312, Length=529, Percent_Identity=25.1417769376182, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71983555, Length=414, Percent_Identity=28.5024154589372, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71987206, Length=563, Percent_Identity=26.2877442273535, Blast_Score=99, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6324091, Length=250, Percent_Identity=32.8, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24642494, Length=544, Percent_Identity=27.2058823529412, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24642490, Length=544, Percent_Identity=27.2058823529412, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI45555723, Length=544, Percent_Identity=27.2058823529412, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24642492, Length=544, Percent_Identity=27.2058823529412, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI281360987, Length=544, Percent_Identity=27.2058823529412, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI24642488, Length=531, Percent_Identity=27.3069679849341, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24642484, Length=531, Percent_Identity=27.3069679849341, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24642486, Length=531, Percent_Identity=27.3069679849341, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17136192, Length=525, Percent_Identity=27.2380952380952, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI17864552, Length=225, Percent_Identity=30.6666666666667, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24650056, Length=204, Percent_Identity=31.8627450980392, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24650058, Length=211, Percent_Identity=30.8056872037915, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI24650060, Length=211, Percent_Identity=30.8056872037915, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45553513, Length=211, Percent_Identity=30.8056872037915, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI45553515, Length=211, Percent_Identity=30.8056872037915, Blast_Score=81, Evalue=2e-15, Organism=Drosophila melanogaster, GI281360985, Length=193, Percent_Identity=31.6062176165803, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008979 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR002884 [H]
Pfam domain/function: PF01483 P_proprotein; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 61530; Mature: 61530
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRQPVSMHRSGRRRTHAMPATRCSATNGIQGQPVFGDQRPRPGVDLDVDILHTLGIRGA CCCCCHHHHHCCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC GVKVAVIDDGLEIAHEDLVDNIVAGGSHNFLNGSNDPTPPADEIDNDHGTAVAGIIAARG CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEHEECC WNGLGGRGVAPEANVAGFNALSILDGSKQYVDIRYSWGDGAEARAMDVYNNSFGISTAVY CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEEC PFSDLDEQRSLEKLMRAQRGGKGGIYVKAAGNDFNTLLDVDAQGKLIDRCSDQTRQLGVA CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHEEE CSSANIDNLNSLTTMIVVGAVNANGVRASYSSPGSALWVSGLSGEFGFQRRFDPHPETYS ECCCCCCCHHHEEEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHH PLYTLLAAQGPQPFFSPAIVTTDLSGCAAGNNRDRTRAPQNALDTSHSKIDASCNYSARM HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCEEEE NGTSASAPTVAGVAALMLGANPQLTLRDVKYILATTAVQVDPHQAKAFYKDAVIEPAWIT CCCCCCCCHHHHHHHHHHCCCCCEEHHHHHEEHHHEEEEECHHHHHHHHHHHCCCCHHCC NAAGHRFSNWYGFGLVDAAAAVERAMHFTPLPAMQDTEWTVYDGESSTIGGIGSPARLAI CCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEE DIKQSFKVEGVQLYFAGTHKHPRQLRAVLVSPSGTRSTVMTPFSTLDPGDGFVVFLTSSN EECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCC AFLDEAAAGRWTLEVDDMLADNGKEQLQEFEMRVVGH CHHHHHCCCEEEEEEHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MLRQPVSMHRSGRRRTHAMPATRCSATNGIQGQPVFGDQRPRPGVDLDVDILHTLGIRGA CCCCCHHHHHCCCCHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC GVKVAVIDDGLEIAHEDLVDNIVAGGSHNFLNGSNDPTPPADEIDNDHGTAVAGIIAARG CEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEEHEECC WNGLGGRGVAPEANVAGFNALSILDGSKQYVDIRYSWGDGAEARAMDVYNNSFGISTAVY CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCEEEEC PFSDLDEQRSLEKLMRAQRGGKGGIYVKAAGNDFNTLLDVDAQGKLIDRCSDQTRQLGVA CCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHEEE CSSANIDNLNSLTTMIVVGAVNANGVRASYSSPGSALWVSGLSGEFGFQRRFDPHPETYS ECCCCCCCHHHEEEEEEEECCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHH PLYTLLAAQGPQPFFSPAIVTTDLSGCAAGNNRDRTRAPQNALDTSHSKIDASCNYSARM HHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCCCEEEE NGTSASAPTVAGVAALMLGANPQLTLRDVKYILATTAVQVDPHQAKAFYKDAVIEPAWIT CCCCCCCCHHHHHHHHHHCCCCCEEHHHHHEEHHHEEEEECHHHHHHHHHHHCCCCHHCC NAAGHRFSNWYGFGLVDAAAAVERAMHFTPLPAMQDTEWTVYDGESSTIGGIGSPARLAI CCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEE DIKQSFKVEGVQLYFAGTHKHPRQLRAVLVSPSGTRSTVMTPFSTLDPGDGFVVFLTSSN EECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCC AFLDEAAAGRWTLEVDDMLADNGKEQLQEFEMRVVGH CHHHHHCCCEEEEEEHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1468618 [H]