| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243561
Identifier: 21243561
GI number: 21243561
Start: 3324246
End: 3324842
Strand: Direct
Name: 21243561
Synonym: XAC2834
Alternate gene names: NA
Gene position: 3324246-3324842 (Clockwise)
Preceding gene: 21243560
Following gene: 21243565
Centisome position: 64.23
GC content: 66.67
Gene sequence:
>597_bases ATGAAAACTTCTCTGATCACACTGCTGTGCGTCGTTGCCGCCAGCATGTCTGCACCCGTCTCGGCACAGGTGTTCGATCG CGCCCGCCTGCGTGCTGCCGCAACCGGGCAGACCGTTGTGGTGGACCGGGCCAGCTTCCGGCTGATTCCAGGAGCAGTGG TACGGCTGGCCGACGCCACGCGCGGCGCTGCCGCCACGCAAACGCTAACAAGCACGCAGACACGCACCAACGCACCGGTT GCCCGCGTCGATCGCTACGCGATCTATCTCGACACCAGCGGCGCGGCGGACGCAGTCGCGCGCACCACGCGCAGCGAACC ATCGGCGACCGTCGTGGCCGCGCTGGAAACGCGTAGCGGCCAGCCGGCACTGCTCGGTGCTTCGATCAAATTGTTCGATA CCACGCCAGCCATCGCGCGTGCACTGGCCACGCATACGGGCGGCAGGTTGCTCTATGCCTCCGCCACCGACGGCAGCGCG ATGATCGGCTACGACTCGGCGATGACGGCATTGGACAATTGCCGCCAGCTGCAAGGCAGCCACGGCGTGGGAGCGATCAA GCCGGAAGTGATCGTCCCGGCGGCACGGCCGTTGTGA
Upstream 100 bases:
>100_bases GCGGCAGCCGGTCGCTGGACACTGGAGGTGGACGACATGCTCGCCGACAACGGCAAGGAACAACTGCAGGAATTCGAAAT GCGCGTGGTGGGCCACTGAC
Downstream 100 bases:
>100_bases CGCGGCTGCTCTAGAACCGCCGCAGCCACGCGTGCCACGCTGCTGCATTGGTCGCAGCGTGGCGCGTTGGCGCAGCCCGC CTCACAGCGGCAGTGGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKTSLITLLCVVAASMSAPVSAQVFDRARLRAAATGQTVVVDRASFRLIPGAVVRLADATRGAAATQTLTSTQTRTNAPV ARVDRYAIYLDTSGAADAVARTTRSEPSATVVAALETRSGQPALLGASIKLFDTTPAIARALATHTGGRLLYASATDGSA MIGYDSAMTALDNCRQLQGSHGVGAIKPEVIVPAARPL
Sequences:
>Translated_198_residues MKTSLITLLCVVAASMSAPVSAQVFDRARLRAAATGQTVVVDRASFRLIPGAVVRLADATRGAAATQTLTSTQTRTNAPV ARVDRYAIYLDTSGAADAVARTTRSEPSATVVAALETRSGQPALLGASIKLFDTTPAIARALATHTGGRLLYASATDGSA MIGYDSAMTALDNCRQLQGSHGVGAIKPEVIVPAARPL >Mature_198_residues MKTSLITLLCVVAASMSAPVSAQVFDRARLRAAATGQTVVVDRASFRLIPGAVVRLADATRGAAATQTLTSTQTRTNAPV ARVDRYAIYLDTSGAADAVARTTRSEPSATVVAALETRSGQPALLGASIKLFDTTPAIARALATHTGGRLLYASATDGSA MIGYDSAMTALDNCRQLQGSHGVGAIKPEVIVPAARPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20367; Mature: 20367
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSLITLLCVVAASMSAPVSAQVFDRARLRAAATGQTVVVDRASFRLIPGAVVRLADAT CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHEEEHHCC RGAAATQTLTSTQTRTNAPVARVDRYAIYLDTSGAADAVARTTRSEPSATVVAALETRSG CCCHHHHHHHCCCCCCCCCHHHEEEEEEEEECCCCHHHHHHHCCCCCCEEEEEEEECCCC QPALLGASIKLFDTTPAIARALATHTGGRLLYASATDGSAMIGYDSAMTALDNCRQLQGS CCEEEECEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHCCC HGVGAIKPEVIVPAARPL CCCCCCCCCEEECCCCCC >Mature Secondary Structure MKTSLITLLCVVAASMSAPVSAQVFDRARLRAAATGQTVVVDRASFRLIPGAVVRLADAT CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCHHHEEEHHCC RGAAATQTLTSTQTRTNAPVARVDRYAIYLDTSGAADAVARTTRSEPSATVVAALETRSG CCCHHHHHHHCCCCCCCCCHHHEEEEEEEEECCCCHHHHHHHCCCCCCEEEEEEEECCCC QPALLGASIKLFDTTPAIARALATHTGGRLLYASATDGSAMIGYDSAMTALDNCRQLQGS CCEEEECEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHCCC HGVGAIKPEVIVPAARPL CCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA