| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243536
Identifier: 21243536
GI number: 21243536
Start: 3294009
End: 3294956
Strand: Direct
Name: 21243536
Synonym: XAC2809
Alternate gene names: NA
Gene position: 3294009-3294956 (Clockwise)
Preceding gene: 21243535
Following gene: 21243541
Centisome position: 63.65
GC content: 66.35
Gene sequence:
>948_bases ATGCCCACGACCGACCTGCGCAAGGCGCAACTGCAAATCCACTTCTGCGTCCTGCTTTGGGGCATCACCGCGATCCTGGG CAAGCTGATCACGCTGCAGGCTTTGCCGCTGGTGTGGTGGCGCATGTTGATCGTGGTGGTGGCACTGGCCTTGTGGCCAC GCGTGTGGCGCGGGCTGCGCGGCTTGTCCGGGCGTGTGGTGCTGGGCTATTGCGGCATCGGCGCGCTGGTGGCCTTGCAC TGGCTCACCTTCTACGGCGCCATCAAGCTGGCCAATGCGTCGGTGGCGGCGACCTGTATCGCACTGGCGCCGGTTTTCAC GGCAGTGATCGAGCCATTGGTCACGCATCGCCCGTTCCGTCCGCGCGAGTTGTTGTTCGGGCTGGCCGTATTGCCCGGCG TGGCGCTGGTCGTCGGCGGGGTGCCGGACGGCATGCGGGCCGGCGTGGTGGTGGGCGCGATTTCGGCGGTGTTCGTCGGG CTATTCGGCTCGCTCAACAAGCGCATGGTGGCGCATGCCGACCCGCTCACCGTCACCGCGCTGGAACTGGGCGCCGGCAC GTTGACCCTGACCCTGCTTGCACCGGCGATGCCGCTGCTGCTGCCGGCGTTGCATGGCGATCTGCTGGTGGTGCCCAGCC TGCACGATGGCGTGTTGCTGCTGGCGTTATCGCTGGCCTGCACCTTGCTGCCCTTCGCGCTGGCGCTGGTGGCGTTGCGG CATCTGAGCGCCTATTCGGTGCAACTGGTGACCAATCTCGAACCGGTCTACGCCATCGTGCTGGCGATCGCGCTGCTGGG CGAACAACGCGAACTGACCCTGCAGTTCTATCTCGGCGTGGCGATCATTCTCGGCGCGGTGTTCCTGCATCCGGTCCTGG AGCGTCGGCGCACCGTTGCGCACCCGGAATTGCTCGGCACAGCCGAGGCGAAGAATATCGTCGACTGA
Upstream 100 bases:
>100_bases GGCTCGACAGCCGGGTCAGCCATCCCCTCGCCCGGCCGCTGCACACTGGCGCCGCTTCCCTCGCAGCGCAACATCACGCA CTTTTCGGCGACAATGGCGC
Downstream 100 bases:
>100_bases TTGCACGGCGCTGCAAGACCACGCTTCTCCACAGCGACCGCTGCGTTGAAGCACGCCGATGTTCAAGCGGCATCGCGCGG CGTCAGCATCCCGGCGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Triose-Phosphate Transporter Family Protein
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPTTDLRKAQLQIHFCVLLWGITAILGKLITLQALPLVWWRMLIVVVALALWPRVWRGLRGLSGRVVLGYCGIGALVALH WLTFYGAIKLANASVAATCIALAPVFTAVIEPLVTHRPFRPRELLFGLAVLPGVALVVGGVPDGMRAGVVVGAISAVFVG LFGSLNKRMVAHADPLTVTALELGAGTLTLTLLAPAMPLLLPALHGDLLVVPSLHDGVLLLALSLACTLLPFALALVALR HLSAYSVQLVTNLEPVYAIVLAIALLGEQRELTLQFYLGVAIILGAVFLHPVLERRRTVAHPELLGTAEAKNIVD
Sequences:
>Translated_315_residues MPTTDLRKAQLQIHFCVLLWGITAILGKLITLQALPLVWWRMLIVVVALALWPRVWRGLRGLSGRVVLGYCGIGALVALH WLTFYGAIKLANASVAATCIALAPVFTAVIEPLVTHRPFRPRELLFGLAVLPGVALVVGGVPDGMRAGVVVGAISAVFVG LFGSLNKRMVAHADPLTVTALELGAGTLTLTLLAPAMPLLLPALHGDLLVVPSLHDGVLLLALSLACTLLPFALALVALR HLSAYSVQLVTNLEPVYAIVLAIALLGEQRELTLQFYLGVAIILGAVFLHPVLERRRTVAHPELLGTAEAKNIVD >Mature_314_residues PTTDLRKAQLQIHFCVLLWGITAILGKLITLQALPLVWWRMLIVVVALALWPRVWRGLRGLSGRVVLGYCGIGALVALHW LTFYGAIKLANASVAATCIALAPVFTAVIEPLVTHRPFRPRELLFGLAVLPGVALVVGGVPDGMRAGVVVGAISAVFVGL FGSLNKRMVAHADPLTVTALELGAGTLTLTLLAPAMPLLLPALHGDLLVVPSLHDGVLLLALSLACTLLPFALALVALRH LSAYSVQLVTNLEPVYAIVLAIALLGEQRELTLQFYLGVAIILGAVFLHPVLERRRTVAHPELLGTAEAKNIVD
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33539; Mature: 33408
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTDLRKAQLQIHFCVLLWGITAILGKLITLQALPLVWWRMLIVVVALALWPRVWRGLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSGRVVLGYCGIGALVALHWLTFYGAIKLANASVAATCIALAPVFTAVIEPLVTHRPFR CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PRELLFGLAVLPGVALVVGGVPDGMRAGVVVGAISAVFVGLFGSLNKRMVAHADPLTVTA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEE LELGAGTLTLTLLAPAMPLLLPALHGDLLVVPSLHDGVLLLALSLACTLLPFALALVALR EECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLSAYSVQLVTNLEPVYAIVLAIALLGEQRELTLQFYLGVAIILGAVFLHPVLERRRTVA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPELLGTAEAKNIVD CHHHHCCHHHHCCCC >Mature Secondary Structure PTTDLRKAQLQIHFCVLLWGITAILGKLITLQALPLVWWRMLIVVVALALWPRVWRGLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLSGRVVLGYCGIGALVALHWLTFYGAIKLANASVAATCIALAPVFTAVIEPLVTHRPFR CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PRELLFGLAVLPGVALVVGGVPDGMRAGVVVGAISAVFVGLFGSLNKRMVAHADPLTVTA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEE LELGAGTLTLTLLAPAMPLLLPALHGDLLVVPSLHDGVLLLALSLACTLLPFALALVALR EECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLSAYSVQLVTNLEPVYAIVLAIALLGEQRELTLQFYLGVAIILGAVFLHPVLERRRTVA HHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HPELLGTAEAKNIVD CHHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA