| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is nuoN [H]
Identifier: 21243419
GI number: 21243419
Start: 3150586
End: 3152046
Strand: Reverse
Name: nuoN [H]
Synonym: XAC2691
Alternate gene names: 21243419
Gene position: 3152046-3150586 (Counterclockwise)
Preceding gene: 21243420
Following gene: 21243418
Centisome position: 60.9
GC content: 63.79
Gene sequence:
>1461_bases ATGACCACGCCAACGCTCGCGCCGTTGACCACCGCTGACCTGGCTCCGCTCGTACCGGAGCTGGTGCTGATCGGCGGCGC CTTCGCACTGCTGATGCTCGACCTGTTCGTGAGCCAGCGGAACAAGGTCTGGACCCACCTGTCCTCCGTTGCCGTGCTTG CCGTGGTGCTCGTGTTGCTTGCGACCGGCACGGGCGGGCAGGGCGATATCTTCAACGGCATGTTCGTCCGCGACACGGCG GCCGATGTCATGAAGACCGTGATCGTGCTGGTCAGCGGGCTGAGCCTGGTCTACGGCTGGACCTACCTGCGCGAGCGCAA TCTCTACCAGGGCGAAATCCCGGTATTGGTACTGTTCGCCACCGCCGGCATGATGTTGCTGGCATCGGCCGGTAGCCTGC TGATGGTGTATCTGGGTCTGGAGCTGCTGGCGCTGTGCTCCTACGCACTGGTCGCCTCCAACCGCGACAATGGCCTGGCC ACCGAAGCGGCGATGAAGTATTTCGTCCTGGGCTCGCTCGCGTCGGGTCTGCTGCTGTACGGCATGTCGCTGGTCTACGG CGCCACCGGTACGCTCAGCCTGGCCGGCATCCATGATGCGATCGAAGGCTCCAACGAGCGCACGTTGCTGCTGACCGGCA CCATCTTCATGATCGCCGGCGTCGCCTTCAAGCTCGGTGCTGCGCCCTTCCACATGTGGCTGCCCGACGTGTATCAGGGT GCGCCTGCACCGATCGCGTTGTTCATCAGCTCGGCGCCCAAGCTTGCAGCGTTCGGTATGGCCTATCGCCTGCTGGAAGT CGGCATGGGTCCGTTGTCGCCGCAGTGGCATCTGCTGATCGGCGGCTTGTCGGCGGTGTCGCTGGTGGTCGGTAACCTGA TGGCCATTGCGCAGAGCAACCTCAAGCGCATGCTCGCGTACTCGACGGTCTCGCATATCGGCTTCCTGCTGATGGGCGTG GCTGGCGGCGGGGAAGAAGGCTACGCGGCCGCGATGTTCTATGCGGTCAGCTACACGATCATGTCCACCGCTTCGTTCGG CGCCATCATCGCGCTGTCGCGTAACGGGTTCGAAGCGGAAAACATCGACGACTTCAAGGGACTCAACGCGCGCAATCCGT GGATGGCTGGCCTGGTGCTGTGCATCATGGCGTCTTTGGCAGGTATCCCCCCGTTCCTCGGTTTCTGGACCAAGCTGGCG GTGCTGGGCGCGGCAGTGAAGGGCGACATGCTGTGGCTGGCGTTGGTCGGCGTGATCTGCGCAGTGATCGGCGCGTACTA CTACCTGCGCGTCATCAAGGTCATGTACTTCGACGAGCCGGTAGGCGAGCCGTTGCCGGCCAATAACGATCGTGTGCTGG GTACCGTGCTCGGCGTCAATGCGCTGGCCCTGCTTGCACTTGGCCTGGCCTGGAGTCCGATCATGGTGTGGTGCCAGCGC GCGTTCGCCGGCCTCGCGTAA
Upstream 100 bases:
>100_bases GCTGACCGATCTGATGGAACCCTCGATCGCCAAGCTGGCAACCCAGATTGCCGCGACCAAGCTCTGACCGCTCGTACGTT TTGATTTCCAGGATTTAATG
Downstream 100 bases:
>100_bases GGCCTCTACGCAACGCTGGGTCTCGCAGTGCCACATCGTGTGGTTGGCATCGCACTGAAATAAACCGTGTTTACTGTTTC GTTTTTGTTGCATTGCGGGT
Product: NADH dehydrogenase subunit N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N [H]
Number of amino acids: Translated: 486; Mature: 485
Protein sequence:
>486_residues MTTPTLAPLTTADLAPLVPELVLIGGAFALLMLDLFVSQRNKVWTHLSSVAVLAVVLVLLATGTGGQGDIFNGMFVRDTA ADVMKTVIVLVSGLSLVYGWTYLRERNLYQGEIPVLVLFATAGMMLLASAGSLLMVYLGLELLALCSYALVASNRDNGLA TEAAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEGSNERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG APAPIALFISSAPKLAAFGMAYRLLEVGMGPLSPQWHLLIGGLSAVSLVVGNLMAIAQSNLKRMLAYSTVSHIGFLLMGV AGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRNGFEAENIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLA VLGAAVKGDMLWLALVGVICAVIGAYYYLRVIKVMYFDEPVGEPLPANNDRVLGTVLGVNALALLALGLAWSPIMVWCQR AFAGLA
Sequences:
>Translated_486_residues MTTPTLAPLTTADLAPLVPELVLIGGAFALLMLDLFVSQRNKVWTHLSSVAVLAVVLVLLATGTGGQGDIFNGMFVRDTA ADVMKTVIVLVSGLSLVYGWTYLRERNLYQGEIPVLVLFATAGMMLLASAGSLLMVYLGLELLALCSYALVASNRDNGLA TEAAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEGSNERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG APAPIALFISSAPKLAAFGMAYRLLEVGMGPLSPQWHLLIGGLSAVSLVVGNLMAIAQSNLKRMLAYSTVSHIGFLLMGV AGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRNGFEAENIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLA VLGAAVKGDMLWLALVGVICAVIGAYYYLRVIKVMYFDEPVGEPLPANNDRVLGTVLGVNALALLALGLAWSPIMVWCQR AFAGLA >Mature_485_residues TTPTLAPLTTADLAPLVPELVLIGGAFALLMLDLFVSQRNKVWTHLSSVAVLAVVLVLLATGTGGQGDIFNGMFVRDTAA DVMKTVIVLVSGLSLVYGWTYLRERNLYQGEIPVLVLFATAGMMLLASAGSLLMVYLGLELLALCSYALVASNRDNGLAT EAAMKYFVLGSLASGLLLYGMSLVYGATGTLSLAGIHDAIEGSNERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQGA PAPIALFISSAPKLAAFGMAYRLLEVGMGPLSPQWHLLIGGLSAVSLVVGNLMAIAQSNLKRMLAYSTVSHIGFLLMGVA GGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRNGFEAENIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLAV LGAAVKGDMLWLALVGVICAVIGAYYYLRVIKVMYFDEPVGEPLPANNDRVLGTVLGVNALALLALGLAWSPIMVWCQRA FAGLA
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family [H]
Homologues:
Organism=Homo sapiens, GI251831108, Length=325, Percent_Identity=25.8461538461538, Blast_Score=83, Evalue=5e-16, Organism=Escherichia coli, GI145693160, Length=475, Percent_Identity=34.3157894736842, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1788614, Length=376, Percent_Identity=28.4574468085106, Blast_Score=108, Evalue=1e-24, Organism=Escherichia coli, GI1788827, Length=330, Percent_Identity=27.5757575757576, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1788831, Length=327, Percent_Identity=26.2996941896024, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1788829, Length=355, Percent_Identity=25.9154929577465, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788613, Length=333, Percent_Identity=26.4264264264264, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010096 - InterPro: IPR001750 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 51213; Mature: 51082
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTLAPLTTADLAPLVPELVLIGGAFALLMLDLFVSQRNKVWTHLSSVAVLAVVLVLL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGTGGQGDIFNGMFVRDTAADVMKTVIVLVSGLSLVYGWTYLRERNLYQGEIPVLVLFA HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHH TAGMMLLASAGSLLMVYLGLELLALCSYALVASNRDNGLATEAAMKYFVLGSLASGLLLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GMSLVYGATGTLSLAGIHDAIEGSNERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG HHHHHHCCCCCEEEHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCHHHCC APAPIALFISSAPKLAAFGMAYRLLEVGMGPLSPQWHLLIGGLSAVSLVVGNLMAIAQSN CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH LKRMLAYSTVSHIGFLLMGVAGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRNGFEAE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC NIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLAVLGAAVKGDMLWLALVGVIC CCCHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGAYYYLRVIKVMYFDEPVGEPLPANNDRVLGTVLGVNALALLALGLAWSPIMVWCQR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAGLA HHHCCC >Mature Secondary Structure TTPTLAPLTTADLAPLVPELVLIGGAFALLMLDLFVSQRNKVWTHLSSVAVLAVVLVLL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGTGGQGDIFNGMFVRDTAADVMKTVIVLVSGLSLVYGWTYLRERNLYQGEIPVLVLFA HCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHH TAGMMLLASAGSLLMVYLGLELLALCSYALVASNRDNGLATEAAMKYFVLGSLASGLLLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH GMSLVYGATGTLSLAGIHDAIEGSNERTLLLTGTIFMIAGVAFKLGAAPFHMWLPDVYQG HHHHHHCCCCCEEEHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHCCHHHCC APAPIALFISSAPKLAAFGMAYRLLEVGMGPLSPQWHLLIGGLSAVSLVVGNLMAIAQSN CCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH LKRMLAYSTVSHIGFLLMGVAGGGEEGYAAAMFYAVSYTIMSTASFGAIIALSRNGFEAE HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC NIDDFKGLNARNPWMAGLVLCIMASLAGIPPFLGFWTKLAVLGAAVKGDMLWLALVGVIC CCCHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIGAYYYLRVIKVMYFDEPVGEPLPANNDRVLGTVLGVNALALLALGLAWSPIMVWCQR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAGLA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA