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The map label for this gene is virB3 [H]

Identifier: 21243346

GI number: 21243346

Start: 3081680

End: 3081991

Strand: Reverse

Name: virB3 [H]

Synonym: XAC2615

Alternate gene names: 21243346

Gene position: 3081991-3081680 (Counterclockwise)

Preceding gene: 21243347

Following gene: 21243345

Centisome position: 59.55

GC content: 52.56

Gene sequence:

>312_bases
ATGCATAAAGACGTACTCTTCCGCGGATGCACCCGCCCCGCCATGTTTTTGGGGGTGCCTTACATCCCCTTCTTCATTGG
TGCGGGCGGTGGCTTGCTGTTGGGGATGTACATCGATCTTTGGTACCTGTTGACCATTCCGGTCATCATCTTTGCCATGC
AGCAGATGGCAAAGCGTGATGAGATGATTTTCAGGCTGCTGGGATTACGTTGGCTGTTCCGAATGCGTGCGCGAAACCTT
CAGCGTTATTCAGGGATGTGGGTCTTCAGCCCAAATGAATATCGCAAGAATCCCCCGGGAAAATCGCGATGA

Upstream 100 bases:

>100_bases
GCTGCTGGCCAGATCGCCAACATGATCCTTCAGAATAAAAACGGCAGTTCGGGTGATTGCTCGACGATCACCGGTTCACT
GATGCAGATCGCTCAATACT

Downstream 100 bases:

>100_bases
GCACGTAGCCGTTACCAACCCCACGCATACAACTCGCGTGGGGTTGGTGTTTGCGATGGTCGCTTGGTGTGATGCTTCCT
CTCTAAATTTGGTAAGACCA

Product: VirB3 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MHKDVLFRGCTRPAMFLGVPYIPFFIGAGGGLLLGMYIDLWYLLTIPVIIFAMQQMAKRDEMIFRLLGLRWLFRMRARNL
QRYSGMWVFSPNEYRKNPPGKSR

Sequences:

>Translated_103_residues
MHKDVLFRGCTRPAMFLGVPYIPFFIGAGGGLLLGMYIDLWYLLTIPVIIFAMQQMAKRDEMIFRLLGLRWLFRMRARNL
QRYSGMWVFSPNEYRKNPPGKSR
>Mature_103_residues
MHKDVLFRGCTRPAMFLGVPYIPFFIGAGGGLLLGMYIDLWYLLTIPVIIFAMQQMAKRDEMIFRLLGLRWLFRMRARNL
QRYSGMWVFSPNEYRKNPPGKSR

Specific function: The virB operon is essential for intracellular survival and is not involved in the invasion process. Constitutes a major determinant of virulence in mice [H]

COG id: COG3702

COG function: function code U; Type IV secretory pathway, VirB3 components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the virB3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007792 [H]

Pfam domain/function: PF05101 VirB3 [H]

EC number: NA

Molecular weight: Translated: 12150; Mature: 12150

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKDVLFRGCTRPAMFLGVPYIPFFIGAGGGLLLGMYIDLWYLLTIPVIIFAMQQMAKRD
CCCCHHHHCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMIFRLLGLRWLFRMRARNLQRYSGMWVFSPNEYRKNPPGKSR
HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCC
>Mature Secondary Structure
MHKDVLFRGCTRPAMFLGVPYIPFFIGAGGGLLLGMYIDLWYLLTIPVIIFAMQQMAKRD
CCCCHHHHCCCCCHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMIFRLLGLRWLFRMRARNLQRYSGMWVFSPNEYRKNPPGKSR
HHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10940027 [H]