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The map label for this gene is virB6

Identifier: 21243343

GI number: 21243343

Start: 3077157

End: 3078209

Strand: Reverse

Name: virB6

Synonym: XAC2612

Alternate gene names: NA

Gene position: 3078209-3077157 (Counterclockwise)

Preceding gene: 21243344

Following gene: 21243342

Centisome position: 59.48

GC content: 58.21

Gene sequence:

>1053_bases
TTGACGAACATCGCCAACTACGAATTTTTTCGTCTGATCAACAACTACCTGCGCGATGAGATCGCGATCTTCCAGTGGGA
GTTGTTGCAGCGAACGACGGCTTGGGTGGGGATGGTGTCCCTGACGGTGTTGACGCTTTGGATCTTTATCCAGGGCTATC
GCATCGTCACCGGTCAGTCGCGCGAGGCGGCGATGGGCTTGGTGGTCACGGCGCTGCGCGCGGCGCTGATCATCGGGGTG
GCGACCAGCATGGCGCAAGGTTCGGCCCGCTTGTACTGGACGCTGACCGATGGAGTCAGCCAGGCAATCACCAAGACAGT
CACGGGCAGCTCAAAGAGCCCGTATGAAGCGATCGACAAGAACTTGATGTTGATGCAAGTGGCCATGTCGGCTCTGGATC
AGATCAAGACCGGCGGTGACGAGGAAAGCAAGGACGAAAAAGACCGGGCTCGGTGGTTCACCGGCCTGGGCATGGCCGGT
CCGGGTGTCGTTGCAGGCTCGATGTTGCTGCTCAACAAGCTGGCCATGGCGCTGGTGGTCGGGTTCGGGCCTCTGTTCAT
CCTGTGTCTGCTGTTCCAAGCGACGAAGTCGTTGTTCAGCAAATGGCTGCTATACGGACTGGGCACTGTGTTTTCGCTGT
CGGTGTTGACCTTCACAGTGAGCTTGGCGACAAAGGTGGTTGGCGCAGTAGGCGCTGCCTTCGTTGCAAAGTGGGCAATG
AACGGGTTTACGGGCGAAGGCATCAGCAGCATGGCGCTGCAGCAGGGAGGATTAGGACTGGTGTTAACGACATTGATCAT
CACCGCACCGCCGATGGCCGCTGCCTTCTTCCAGGGCACGCTGGGCCAGTTCACGGCGTATTCTGCCCTGGGGCAGCTGG
ATCGAGGCGGTCAGTCAGCTCCGGCTGCTGGGCGGCCTTATGAGCCGGGGGCGCCGGCTAGAGAAACGCAGGATACTTCT
CCTCAAAGGGCACGTGGAATAAATACCGTTAATTCTTCTGACGTTTCATCCCAAGAGCCTAGTTCAGGTAATCGTGGGCT
TGCACAAAAGTAA

Upstream 100 bases:

>100_bases
TGATGGAGCTGGTTTACCTGTTTAGGCAACATACTCAAACCCGGGGCATCGACTGCCCCACGGCGCAGCCGTCTAGTGGA
TGTGGTGACATATGGATTTT

Downstream 100 bases:

>100_bases
CTTGTCGCCTTTTCAGCTGATGTGGTGAAAAATGATTATTATCCGCTTGGCTTCAATTATTCTTCTTGTAAGTTGGACTG
CCCCTGCTTTCGCTCAAACG

Product: VirB6 protein

Products: NA

Alternate protein names: Type IV Secretion System; VirB6-Like Membrane Protein; Virb6 Protein; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Type IV Secretion System Transmembrane Protein

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTNIANYEFFRLINNYLRDEIAIFQWELLQRTTAWVGMVSLTVLTLWIFIQGYRIVTGQSREAAMGLVVTALRAALIIGV
ATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAIDKNLMLMQVAMSALDQIKTGGDEESKDEKDRARWFTGLGMAG
PGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAKWAM
NGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPARETQDTS
PQRARGINTVNSSDVSSQEPSSGNRGLAQK

Sequences:

>Translated_350_residues
MTNIANYEFFRLINNYLRDEIAIFQWELLQRTTAWVGMVSLTVLTLWIFIQGYRIVTGQSREAAMGLVVTALRAALIIGV
ATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAIDKNLMLMQVAMSALDQIKTGGDEESKDEKDRARWFTGLGMAG
PGVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAKWAM
NGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPARETQDTS
PQRARGINTVNSSDVSSQEPSSGNRGLAQK
>Mature_349_residues
TNIANYEFFRLINNYLRDEIAIFQWELLQRTTAWVGMVSLTVLTLWIFIQGYRIVTGQSREAAMGLVVTALRAALIIGVA
TSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAIDKNLMLMQVAMSALDQIKTGGDEESKDEKDRARWFTGLGMAGP
GVVAGSMLLLNKLAMALVVGFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAKWAMN
GFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSAPAAGRPYEPGAPARETQDTSP
QRARGINTVNSSDVSSQEPSSGNRGLAQK

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37267; Mature: 37135

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIANYEFFRLINNYLRDEIAIFQWELLQRTTAWVGMVSLTVLTLWIFIQGYRIVTGQS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
REAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAIDK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHH
NLMLMQVAMSALDQIKTGGDEESKDEKDRARWFTGLGMAGPGVVAGSMLLLNKLAMALVV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAKWAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSA
CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAAGRPYEPGAPARETQDTSPQRARGINTVNSSDVSSQEPSSGNRGLAQK
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TNIANYEFFRLINNYLRDEIAIFQWELLQRTTAWVGMVSLTVLTLWIFIQGYRIVTGQS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC
REAAMGLVVTALRAALIIGVATSMAQGSARLYWTLTDGVSQAITKTVTGSSKSPYEAIDK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHH
NLMLMQVAMSALDQIKTGGDEESKDEKDRARWFTGLGMAGPGVVAGSMLLLNKLAMALVV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
GFGPLFILCLLFQATKSLFSKWLLYGLGTVFSLSVLTFTVSLATKVVGAVGAAFVAKWAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGFTGEGISSMALQQGGLGLVLTTLIITAPPMAAAFFQGTLGQFTAYSALGQLDRGGQSA
CCCCCCCHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PAAGRPYEPGAPARETQDTSPQRARGINTVNSSDVSSQEPSSGNRGLAQK
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA