| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243344
Identifier: 21243344
GI number: 21243344
Start: 3078307
End: 3079134
Strand: Reverse
Name: 21243344
Synonym: XAC2613
Alternate gene names: NA
Gene position: 3079134-3078307 (Counterclockwise)
Preceding gene: 21243345
Following gene: 21243343
Centisome position: 59.49
GC content: 56.28
Gene sequence:
>828_bases ATGCATAGTCAGTCCAGGCACGCGAAGCGGTTCCACACCGCACCATCTTTATTTGTGTCACAGGAGGCGAAGAACACCAT GGCAATCAAGTTCAGACATTTTTCCCGGGTCTTCATGGGACTGGTGCTGCTCAGCATGGCGGGAGCGGCCAGTGCGCAAT GGGAAGTTATCGACAACAAGCTCAATGGAACGACCAAGGAGATCCTTGACAATCAGACGGTGGGCAAGGGCGAGGGCAAG GAATCCAGCGGCAAGGAGGTCGAGAAGCCCAAGGAGACCTTGAAGAAGGTGGCAGATGATGAGGGTGTGGCCGCCTGTTC GGCGTCCACGTCTGGAACACCTGTCTCTGATTCGCAGAGGGAATCCTGCGAGCTGATCCAACGCACGCGCAATTCCCAGT TCAACTACATGGTGGCGATGTACGAGATCACCACCAAGCGCCTGGAGCGTCTGCGCACGATCGAGGAAGAGCGCAAGAAG ATCGGCGACCAGAAGATTGGCGAGCTGGAAAGCAACACCAATAAGCTTCTGGCGCTGAAGGCGATGATGGATATCGATCG CCAGCAGATGGAGTCGGCAATGTTCGCCTACGAAAAGCGCTTGGCATTCTTGACCGAGCTGCAAACCGGCGCTGCGAAGG CCGCGATGGCGGGGAAGGAGCCGCCGAAGGGAGATGGAAGCAGTTCGTGGTTGCCATCCTGGATTCCAGCCGATCTGTTG AGCATCGGTAAGACGCTTGTCGCAGGGGCGGTGATGAAAGGTGCGTTCGAGGCTATTAAATCAGACACGCCAGCCGGTAT GGAAAGATTAGAGATCGACAAGGACTGA
Upstream 100 bases:
>100_bases ACCGTGGACCAACTGACGCCGGAGCAATGGTTGGCCGATTTCTATGCCAACCGCAAGGGCTCCGGTAAGCGCAAGTCGGC CAAGGACAAGGAGGTCGAAG
Downstream 100 bases:
>100_bases TGGAGCTGGTTTACCTGTTTAGGCAACATACTCAAACCCGGGGCATCGACTGCCCCACGGCGCAGCCGTCTAGTGGATGT GGTGACATATGGATTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MHSQSRHAKRFHTAPSLFVSQEAKNTMAIKFRHFSRVFMGLVLLSMAGAASAQWEVIDNKLNGTTKEILDNQTVGKGEGK ESSGKEVEKPKETLKKVADDEGVAACSASTSGTPVSDSQRESCELIQRTRNSQFNYMVAMYEITTKRLERLRTIEEERKK IGDQKIGELESNTNKLLALKAMMDIDRQQMESAMFAYEKRLAFLTELQTGAAKAAMAGKEPPKGDGSSSWLPSWIPADLL SIGKTLVAGAVMKGAFEAIKSDTPAGMERLEIDKD
Sequences:
>Translated_275_residues MHSQSRHAKRFHTAPSLFVSQEAKNTMAIKFRHFSRVFMGLVLLSMAGAASAQWEVIDNKLNGTTKEILDNQTVGKGEGK ESSGKEVEKPKETLKKVADDEGVAACSASTSGTPVSDSQRESCELIQRTRNSQFNYMVAMYEITTKRLERLRTIEEERKK IGDQKIGELESNTNKLLALKAMMDIDRQQMESAMFAYEKRLAFLTELQTGAAKAAMAGKEPPKGDGSSSWLPSWIPADLL SIGKTLVAGAVMKGAFEAIKSDTPAGMERLEIDKD >Mature_275_residues MHSQSRHAKRFHTAPSLFVSQEAKNTMAIKFRHFSRVFMGLVLLSMAGAASAQWEVIDNKLNGTTKEILDNQTVGKGEGK ESSGKEVEKPKETLKKVADDEGVAACSASTSGTPVSDSQRESCELIQRTRNSQFNYMVAMYEITTKRLERLRTIEEERKK IGDQKIGELESNTNKLLALKAMMDIDRQQMESAMFAYEKRLAFLTELQTGAAKAAMAGKEPPKGDGSSSWLPSWIPADLL SIGKTLVAGAVMKGAFEAIKSDTPAGMERLEIDKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30298; Mature: 30298
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSQSRHAKRFHTAPSLFVSQEAKNTMAIKFRHFSRVFMGLVLLSMAGAASAQWEVIDNK CCCCHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC LNGTTKEILDNQTVGKGEGKESSGKEVEKPKETLKKVADDEGVAACSASTSGTPVSDSQR CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHH ESCELIQRTRNSQFNYMVAMYEITTKRLERLRTIEEERKKIGDQKIGELESNTNKLLALK HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH AMMDIDRQQMESAMFAYEKRLAFLTELQTGAAKAAMAGKEPPKGDGSSSWLPSWIPADLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH SIGKTLVAGAVMKGAFEAIKSDTPAGMERLEIDKD HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC >Mature Secondary Structure MHSQSRHAKRFHTAPSLFVSQEAKNTMAIKFRHFSRVFMGLVLLSMAGAASAQWEVIDNK CCCCHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC LNGTTKEILDNQTVGKGEGKESSGKEVEKPKETLKKVADDEGVAACSASTSGTPVSDSQR CCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHH ESCELIQRTRNSQFNYMVAMYEITTKRLERLRTIEEERKKIGDQKIGELESNTNKLLALK HHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHH AMMDIDRQQMESAMFAYEKRLAFLTELQTGAAKAAMAGKEPPKGDGSSSWLPSWIPADLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH SIGKTLVAGAVMKGAFEAIKSDTPAGMERLEIDKD HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA