The gene/protein map for NC_003919 is currently unavailable.
Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is yehV [C]

Identifier: 21243318

GI number: 21243318

Start: 3048046

End: 3048402

Strand: Reverse

Name: yehV [C]

Synonym: XAC2587

Alternate gene names: 21243318

Gene position: 3048402-3048046 (Counterclockwise)

Preceding gene: 21243319

Following gene: 21243317

Centisome position: 58.9

GC content: 62.18

Gene sequence:

>357_bases
ATGCTGGATCCGGGCAGTAATCGCGAGCTACCGCCGATCCCGGCCAAGCGCTATTTCACCATTGGTGAGGTGAGCGAGCT
ATGCGACGTCAAGCCGCATGTGCTGCGCTATTGGGAAACCGAGTTTCCCAGCCTGGAGCCGGTCAAGCGGCGCGGGAACC
GGCGCTACTACCAGCGCCATGACGTGCTGATGGTGCGTCAGATCCGCGGGCTGCTGTACGAGCAGGGCTATACCATCGGT
GGTGCGCGCTTGCGTCTGGAAGGCGAAGGCGCCAAGAGCGAGTCGGCGCTGAGCAATCAGATCATCAAGCAGGTGCGGAT
GGAGCTGGAAGAAGTCCTGCAACTGCTGCGCCGCTAG

Upstream 100 bases:

>100_bases
CCCGGTCGCAATCCCAAGACTGGCGAAGAAATTCCGATCTCGGCACGGACGGTCGTGACGTTCCGCCCTGGCCAAAAACT
CAAGGAACGGGTGGAGGCTT

Downstream 100 bases:

>100_bases
GAAAACGTTTCACAAAGCCGCTATAATCGCAGGCCGCCTCGCGGCGGAACGCGGCATCTTCGGGGTATAGCGCAGCCTGG
TAGCGCACTAGTCTGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG
GARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR

Sequences:

>Translated_118_residues
MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG
GARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR
>Mature_118_residues
MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRHDVLMVRQIRGLLYEQGYTIG
GARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13840; Mature: 13840

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH
CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH
DVLMVRQIRGLLYEQGYTIGGARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLDPGSNRELPPIPAKRYFTIGEVSELCDVKPHVLRYWETEFPSLEPVKRRGNRRYYQRH
CCCCCCCCCCCCCCCCCEECHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHCCCCCHHHHH
DVLMVRQIRGLLYEQGYTIGGARLRLEGEGAKSESALSNQIIKQVRMELEEVLQLLRR
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA