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The map label for this gene is gumB [C]

Identifier: 21243317

GI number: 21243317

Start: 3046740

End: 3047381

Strand: Reverse

Name: gumB [C]

Synonym: XAC2585

Alternate gene names: 21243317

Gene position: 3047381-3046740 (Counterclockwise)

Preceding gene: 21243318

Following gene: 21243316

Centisome position: 58.88

GC content: 60.9

Gene sequence:

>642_bases
ATGACACTGGGCGCTTGCAGCACCGGTAAGGACATGGCGACCTCGTTGCCGCTGCCTGACCCGCTCGCAATGTCGGCAGT
GCAGCCCGAGTATCGGCTTTCGCCAGGCGACCTGTTGCTGGTCAAGGTCTTCCAGATCGACGATCTGGAGCGGCAGGTCC
GTATCGATCAGAACGGCCATATTTCGTTGCCGCTCATCGGCGATGTGAATGCGGCCGGCATGGGCGTCGGTGAGTTGGAA
AAGATGGTGGCCGACCGGTATCGCAACGGTTATCTGCAAAATCCGCAGGTGTCGGTGTTCGTGCAGGAATCCAACGGCCG
TCGCGTCACCGTGACCGGGGCGGTCGACGAGCCGGGCATCTATCCGGTGATCGGCGCCAATCTGACCTTGCAGCAAGCCA
TTGCGCAGGCCAAGGGTGTGAGTACGGTCGCCAGCCGCGGCAATGTCATCGTGTTTCGCATGGTCAACGGGCAAAAGATG
CTCGCGCGGTTCGACCTGACCGAAATCGAGAAGGGCACCAATCCGGATCCTGAGATCTATGGCGGCGACATCGTCGTGGT
GTACCGCTCGGATGCGCGCGTGTGGTTGCGCACCATGCTGGAACTGACTCCTCTTGTGATGGTGTGGCGCGCTTACCGAT
GA

Upstream 100 bases:

>100_bases
CGCGAGCTCCTGTCCCACCCAACCGAGGCAGCCAGCCACACGCATGAAGAAACTGATCGGACGATTTTGCCAAGCGCTCA
GCCTGGCGTTGATCTGCTCG

Downstream 100 bases:

>100_bases
GCATGAATTCCGACAATCGTTCCTCTTCGTCGCAGCGTCATGGGCATCTCGAACTTGCCGATGTGGGGTTGCTCGATTAC
TGGCGCGCCCTGGTATCGCA

Product: GumB protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis/Export Protein; Polysaccharide Export Outer Membrane Protein; Polysaccharide Export Periplasmic Protein; Polysaccharide Export Protein EpsE; Periplasmic Polysaccharide Export Protein; Capsular Polysaccharide Export Protein; GumB Protein; Amylovoran Export Outer Membrane Protein AmsH; Polysaccharide Biosynthesis; Periplasmic Protein Involved In Polysaccharide Export; Polysaccharide Export Protein Outer Membrane; Capsule Polysaccharide Export Protein; Polysaccharide Export-Related Protein; Polysaccharide Biosynthesis/Export Lipoprotein; Exopolysaccharide Production Protein; Outer Membrane Protein Performing Polysaccharide Export; Polysaccharide Secretin Protein HfsD; Exopolysaccharide Biosynthesis/Export Protein; Polysaccharide Export System Protein; Polysaccharide Export Protein Epse; Xanthan Biosynthesis Polysaccharide Export Protein GumB; Outer Membrane Xanthan Exporter; Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTLGACSTGKDMATSLPLPDPLAMSAVQPEYRLSPGDLLLVKVFQIDDLERQVRIDQNGHISLPLIGDVNAAGMGVGELE
KMVADRYRNGYLQNPQVSVFVQESNGRRVTVTGAVDEPGIYPVIGANLTLQQAIAQAKGVSTVASRGNVIVFRMVNGQKM
LARFDLTEIEKGTNPDPEIYGGDIVVVYRSDARVWLRTMLELTPLVMVWRAYR

Sequences:

>Translated_213_residues
MTLGACSTGKDMATSLPLPDPLAMSAVQPEYRLSPGDLLLVKVFQIDDLERQVRIDQNGHISLPLIGDVNAAGMGVGELE
KMVADRYRNGYLQNPQVSVFVQESNGRRVTVTGAVDEPGIYPVIGANLTLQQAIAQAKGVSTVASRGNVIVFRMVNGQKM
LARFDLTEIEKGTNPDPEIYGGDIVVVYRSDARVWLRTMLELTPLVMVWRAYR
>Mature_212_residues
TLGACSTGKDMATSLPLPDPLAMSAVQPEYRLSPGDLLLVKVFQIDDLERQVRIDQNGHISLPLIGDVNAAGMGVGELEK
MVADRYRNGYLQNPQVSVFVQESNGRRVTVTGAVDEPGIYPVIGANLTLQQAIAQAKGVSTVASRGNVIVFRMVNGQKML
ARFDLTEIEKGTNPDPEIYGGDIVVVYRSDARVWLRTMLELTPLVMVWRAYR

Specific function: May Be Involved In Polysaccharide Transport. [C]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Integral Membrane Protein. Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23347; Mature: 23216

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLGACSTGKDMATSLPLPDPLAMSAVQPEYRLSPGDLLLVKVFQIDDLERQVRIDQNGH
CCCCCCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCC
ISLPLIGDVNAAGMGVGELEKMVADRYRNGYLQNPQVSVFVQESNGRRVTVTGAVDEPGI
EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCC
YPVIGANLTLQQAIAQAKGVSTVASRGNVIVFRMVNGQKMLARFDLTEIEKGTNPDPEIY
EEEECCCCHHHHHHHHHCCCHHHHCCCCEEEEEEECCCEEEEECCHHHHHCCCCCCCCEE
GGDIVVVYRSDARVWLRTMLELTPLVMVWRAYR
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLGACSTGKDMATSLPLPDPLAMSAVQPEYRLSPGDLLLVKVFQIDDLERQVRIDQNGH
CCCCCCCCCCHHCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCC
ISLPLIGDVNAAGMGVGELEKMVADRYRNGYLQNPQVSVFVQESNGRRVTVTGAVDEPGI
EEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCC
YPVIGANLTLQQAIAQAKGVSTVASRGNVIVFRMVNGQKMLARFDLTEIEKGTNPDPEIY
EEEECCCCHHHHHHHHHCCCHHHHCCCCEEEEEEECCCEEEEECCHHHHHCCCCCCCCEE
GGDIVVVYRSDARVWLRTMLELTPLVMVWRAYR
CCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA