| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gumH
Identifier: 21243311
GI number: 21243311
Start: 3038837
End: 3039979
Strand: Reverse
Name: gumH
Synonym: XAC2579
Alternate gene names: NA
Gene position: 3039979-3038837 (Counterclockwise)
Preceding gene: 21243312
Following gene: 21243310
Centisome position: 58.74
GC content: 62.12
Gene sequence:
>1143_bases ATGAAAGTGGTGCATGTCGTCCGCCAATTCCATCCTTCGATCGGGGGCATGGAAGAGGTCGTTCTCAATGTTGCCCGCCA ACATCAAGCCACTAGCGCCGATACGGTCGAGGTCGTGACGCTCGATCGTGTGTTCACCGATCCGGGTGCGCAACTTGCGG CGCAGGACACGCATCAAGGGCTGTCGATCCGGCGGATTGGCTATCGCGGCTCGTCGCGCTACCCGCTGGCGCCCTCGGTG CTTGGTGCGATTCGTTCGGCCGATGTCGTGCATCTGCATGGCATCGACTTTTTTTACGACTATCTGGCATTGACCAAGCC GTTGCACGGCAAGCCGATGGTGGTGTCCACGCACGGCGGGTTTTTCCATACCGCCTACGCATCGCGCATGAAGCAGCTGT GGTTCCAGACGCTCACGCGCACCTCGGCACTGGCCTATGCACGCGTGATCGCCACCAGCGAAAACGATGGCGATCTGTTC GCCAAGGTGGTGGCACCGGCGCGGCTGCGGGTGATCGAAAACGGTGTGGACGTAGAAAAATATGCAGGGCAGGGGGCGAC CACGCCCGGCCGGACCATGCTGTATTTCGGGCGCTGGTCGGTCAACAAGGGGCTGATCGAAACCCTGGAGTTGTTGCAGG CGGCGCTCAAGCGCGACCCGCAATGGCGGTTGATCATTGCCGGCCGCGAATACGATCTGAACGAAGCGGATCTGCGCAAA GCGATCGCCGAGCGCGGGCTGCAGGACAAGGTGCAGCTGAGCATGTCGCCCTCGCAGGAGCAGTTGCGCGCATTGATGCA GCAGGCGCAGTTCTTTGTGTGCCTGTCGCGGCATGAAGGCTTTGGTATCGCGGCGGTGGAGGCGATGAGCGCGGGCCTGA TCCCGATCCTCAGCGATATTCCGCCATTCGTGCGGCTTGCCAGCGAATCGGGCCAGGGCGTGATCGTCAACCGCGACAGG ATCGAAGCGGCAGCAGATCAGGTGCAGGCGCTTGCCTTGCAGTCCGACAGCGATTTCGACACCCGTCGCTCGGCGTCCAT GGCCTATGTGAGCCGCTATGACTGGAAGCACGTGGTCGGGCGCTACGTCGACGAATACCACGACGCGTTGGGCATTCCGC GCGTGCAGGAGGCTGTGCGATGA
Upstream 100 bases:
>100_bases GCGCCGTGGATGTTGGGGTTGAAACGCAAATGACGAGTTTTCAGAATCATCAGCCGTCGCAGCAACTGAGTGCGCGCCGC TGGCAAAGGAGAGTGGCGTA
Downstream 100 bases:
>100_bases GCGCGCCAGCTTCTGCGTCAATGACGCATGCGGCAACACAGCCGCAGGTGACGGTGCTGTTTTCCACCGAAAAGCCCAAT GCCAATACCAACCCGTACCT
Product: GumH protein
Products: NA
Alternate protein names: GumH Protein; Glycosyl Transferase Gt4J; A-Glycosyltransferase; Xanthan Biosynthesis Glucuronosyltransferase GumH; Glycosyl Transferase WecB/TagA/CpsF Family
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MKVVHVVRQFHPSIGGMEEVVLNVARQHQATSADTVEVVTLDRVFTDPGAQLAAQDTHQGLSIRRIGYRGSSRYPLAPSV LGAIRSADVVHLHGIDFFYDYLALTKPLHGKPMVVSTHGGFFHTAYASRMKQLWFQTLTRTSALAYARVIATSENDGDLF AKVVAPARLRVIENGVDVEKYAGQGATTPGRTMLYFGRWSVNKGLIETLELLQAALKRDPQWRLIIAGREYDLNEADLRK AIAERGLQDKVQLSMSPSQEQLRALMQQAQFFVCLSRHEGFGIAAVEAMSAGLIPILSDIPPFVRLASESGQGVIVNRDR IEAAADQVQALALQSDSDFDTRRSASMAYVSRYDWKHVVGRYVDEYHDALGIPRVQEAVR
Sequences:
>Translated_380_residues MKVVHVVRQFHPSIGGMEEVVLNVARQHQATSADTVEVVTLDRVFTDPGAQLAAQDTHQGLSIRRIGYRGSSRYPLAPSV LGAIRSADVVHLHGIDFFYDYLALTKPLHGKPMVVSTHGGFFHTAYASRMKQLWFQTLTRTSALAYARVIATSENDGDLF AKVVAPARLRVIENGVDVEKYAGQGATTPGRTMLYFGRWSVNKGLIETLELLQAALKRDPQWRLIIAGREYDLNEADLRK AIAERGLQDKVQLSMSPSQEQLRALMQQAQFFVCLSRHEGFGIAAVEAMSAGLIPILSDIPPFVRLASESGQGVIVNRDR IEAAADQVQALALQSDSDFDTRRSASMAYVSRYDWKHVVGRYVDEYHDALGIPRVQEAVR >Mature_380_residues MKVVHVVRQFHPSIGGMEEVVLNVARQHQATSADTVEVVTLDRVFTDPGAQLAAQDTHQGLSIRRIGYRGSSRYPLAPSV LGAIRSADVVHLHGIDFFYDYLALTKPLHGKPMVVSTHGGFFHTAYASRMKQLWFQTLTRTSALAYARVIATSENDGDLF AKVVAPARLRVIENGVDVEKYAGQGATTPGRTMLYFGRWSVNKGLIETLELLQAALKRDPQWRLIIAGREYDLNEADLRK AIAERGLQDKVQLSMSPSQEQLRALMQQAQFFVCLSRHEGFGIAAVEAMSAGLIPILSDIPPFVRLASESGQGVIVNRDR IEAAADQVQALALQSDSDFDTRRSASMAYVSRYDWKHVVGRYVDEYHDALGIPRVQEAVR
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42148; Mature: 42148
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVHVVRQFHPSIGGMEEVVLNVARQHQATSADTVEVVTLDRVFTDPGAQLAAQDTHQG CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHCC LSIRRIGYRGSSRYPLAPSVLGAIRSADVVHLHGIDFFYDYLALTKPLHGKPMVVSTHGG CEEEEECCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCEEEEECCC FFHTAYASRMKQLWFQTLTRTSALAYARVIATSENDGDLFAKVVAPARLRVIENGVDVEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH YAGQGATTPGRTMLYFGRWSVNKGLIETLELLQAALKRDPQWRLIIAGREYDLNEADLRK HCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH AIAERGLQDKVQLSMSPSQEQLRALMQQAQFFVCLSRHEGFGIAAVEAMSAGLIPILSDI HHHHCCCCHHEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCHHHHHCC PPFVRLASESGQGVIVNRDRIEAAADQVQALALQSDSDFDTRRSASMAYVSRYDWKHVVG CHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHH RYVDEYHDALGIPRVQEAVR HHHHHHHHHCCCCHHHHHCC >Mature Secondary Structure MKVVHVVRQFHPSIGGMEEVVLNVARQHQATSADTVEVVTLDRVFTDPGAQLAAQDTHQG CHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHCC LSIRRIGYRGSSRYPLAPSVLGAIRSADVVHLHGIDFFYDYLALTKPLHGKPMVVSTHGG CEEEEECCCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCEEEEECCC FFHTAYASRMKQLWFQTLTRTSALAYARVIATSENDGDLFAKVVAPARLRVIENGVDVEK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH YAGQGATTPGRTMLYFGRWSVNKGLIETLELLQAALKRDPQWRLIIAGREYDLNEADLRK HCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHH AIAERGLQDKVQLSMSPSQEQLRALMQQAQFFVCLSRHEGFGIAAVEAMSAGLIPILSDI HHHHCCCCHHEEEECCCCHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHCCCHHHHHCC PPFVRLASESGQGVIVNRDRIEAAADQVQALALQSDSDFDTRRSASMAYVSRYDWKHVVG CHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHH RYVDEYHDALGIPRVQEAVR HHHHHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA