| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gumI
Identifier: 21243310
GI number: 21243310
Start: 3037791
End: 3038840
Strand: Reverse
Name: gumI
Synonym: XAC2578
Alternate gene names: NA
Gene position: 3038840-3037791 (Counterclockwise)
Preceding gene: 21243311
Following gene: 21243309
Centisome position: 58.72
GC content: 64.86
Gene sequence:
>1050_bases ATGAGCGCGCCAGCTTCTGCGTCAATGACGCATGCGGCAACACAGCCGCAGGTGACGGTGCTGTTTTCCACCGAAAAGCC CAATGCCAATACCAACCCGTACCTGACCCAGCTCTACGACGCGCTGCCTGCCGCAGTGCATCCGCGTTTCTTCTCGATGC GCGATGCATTGCTGTCGCGTTACGACGTGTTGCATCTGCATTGGCCCGAATACCTGCTACGCCATCCGAGCACTGCCGGC ACCTTGGCCAAGCAGGTCTGCGCTGCGTTGTTGTTGCTCAAGCTGCAGCTGACCGGCACGCCGGTGGTGCGCACCCTGCA CAATCTTGCGCCGCATGAGGACCGCGGCTGGCGCGAACGTAGCCTGCTGCGCTGGATCGACCGGCTGACGCGGCGCTGGA TTCGCATCAATGCGACCACGCCGTCACGTCCGCCGTTCACCGATACGATTCTGCACGGCCATTATCGCGACTGGTTCGCG AGCATGGAGCAGGGCAGCACGGTGCCCGGACGGCTGCTGCACTTTGGCCTGATTCGCCCGTACAAAGGCGTCGAAACCTT GCTGGAGGTCATGCGCGGGGTGGACGATGCGCGTCTCAGCCTGCGTATCGTCGGCAGCCCGGCCACGCCGCAGATGCGCA CCTTGGTGGAGGACGCCTGCGCGCAGGATCCGCGGATCAGCGCTTTGCTGGCCTATGTGGAAGAGCCGGTGCTGGCGCGC GAAGTCAGCGCGGCCGAACTGGTGGTGTTGCCGTATCGGCAGATGCATAACTCCGGCACGTTGCTGCTGGCGTTGTCGCT GGCGCGTCCGGTGCTGGCGCCGTGGAGCGAATCCAACGCGGCCATCGCCGAGGAAGTCGGCCCCGGTTGGGTGTTCCTGT ATGAAGGCGAGTTCGATGCCGCGCTCCTGACGGGCATGCTGGACAAGGTGCGTGCTGCGCCACGCGGCCCGGCGCCGGAT CTCTCGCAGCGCGACTGGCCGCGGATCGGGCAGTTGCATTACCGCACCTATCTGGAAGCGTTGGGCAAGGATGGAGATGC CGCGCTGTGA
Upstream 100 bases:
>100_bases TGGCCTATGTGAGCCGCTATGACTGGAAGCACGTGGTCGGGCGCTACGTCGACGAATACCACGACGCGTTGGGCATTCCG CGCGTGCAGGAGGCTGTGCG
Downstream 100 bases:
>100_bases CCGCAGAGACACCTACGATGCCATCTTCCACACCGCCGCCACCGCCACAGCGCAGTCTGGGCTCGCGCGCTGCTGGCGGC GCAGCGGTGACCATGCTTGG
Product: GumI protein
Products: NA
Alternate protein names: GumI Protein; Glycosyl Transferase Gt4J
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MSAPASASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSRYDVLHLHWPEYLLRHPSTAG TLAKQVCAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRERSLLRWIDRLTRRWIRINATTPSRPPFTDTILHGHYRDWFA SMEQGSTVPGRLLHFGLIRPYKGVETLLEVMRGVDDARLSLRIVGSPATPQMRTLVEDACAQDPRISALLAYVEEPVLAR EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYEGEFDAALLTGMLDKVRAAPRGPAPD LSQRDWPRIGQLHYRTYLEALGKDGDAAL
Sequences:
>Translated_349_residues MSAPASASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSRYDVLHLHWPEYLLRHPSTAG TLAKQVCAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRERSLLRWIDRLTRRWIRINATTPSRPPFTDTILHGHYRDWFA SMEQGSTVPGRLLHFGLIRPYKGVETLLEVMRGVDDARLSLRIVGSPATPQMRTLVEDACAQDPRISALLAYVEEPVLAR EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYEGEFDAALLTGMLDKVRAAPRGPAPD LSQRDWPRIGQLHYRTYLEALGKDGDAAL >Mature_348_residues SAPASASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSRYDVLHLHWPEYLLRHPSTAGT LAKQVCAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRERSLLRWIDRLTRRWIRINATTPSRPPFTDTILHGHYRDWFAS MEQGSTVPGRLLHFGLIRPYKGVETLLEVMRGVDDARLSLRIVGSPATPQMRTLVEDACAQDPRISALLAYVEEPVLARE VSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYEGEFDAALLTGMLDKVRAAPRGPAPDL SQRDWPRIGQLHYRTYLEALGKDGDAAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38912; Mature: 38781
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPASASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSR CCCCCCCCHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH YDVLHLHWPEYLLRHPSTAGTLAKQVCAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRER HCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH SLLRWIDRLTRRWIRINATTPSRPPFTDTILHGHYRDWFASMEQGSTVPGRLLHFGLIRP HHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCC YKGVETLLEVMRGVDDARLSLRIVGSPATPQMRTLVEDACAQDPRISALLAYVEEPVLAR CHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYEGEFDA HCCCHHEEEECHHHHCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCHH ALLTGMLDKVRAAPRGPAPDLSQRDWPRIGQLHYRTYLEALGKDGDAAL HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAPASASMTHAATQPQVTVLFSTEKPNANTNPYLTQLYDALPAAVHPRFFSMRDALLSR CCCCCCCHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH YDVLHLHWPEYLLRHPSTAGTLAKQVCAALLLLKLQLTGTPVVRTLHNLAPHEDRGWRER HCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHH SLLRWIDRLTRRWIRINATTPSRPPFTDTILHGHYRDWFASMEQGSTVPGRLLHFGLIRP HHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHCCC YKGVETLLEVMRGVDDARLSLRIVGSPATPQMRTLVEDACAQDPRISALLAYVEEPVLAR CHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH EVSAAELVVLPYRQMHNSGTLLLALSLARPVLAPWSESNAAIAEEVGPGWVFLYEGEFDA HCCCHHEEEECHHHHCCCCCEEEEEEHHCCCCCCCCCCCCHHHHHCCCCEEEEECCCCHH ALLTGMLDKVRAAPRGPAPDLSQRDWPRIGQLHYRTYLEALGKDGDAAL HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA