| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fruA [H]
Identifier: 21243236
GI number: 21243236
Start: 2927995
End: 2929737
Strand: Direct
Name: fruA [H]
Synonym: XAC2503
Alternate gene names: 21243236
Gene position: 2927995-2929737 (Clockwise)
Preceding gene: 21243235
Following gene: 21243237
Centisome position: 56.57
GC content: 70.34
Gene sequence:
>1743_bases ATGTCCTCTTCCATCGTGGTCATCGCCGCTGGCGAACGCAGTACCGAAGCCGTGCTGGCGGCCGAAGCGCTGCGCCGCGC GGCCACTGCCGCCGGCCGTCGCGTGACGATCGAAATCCGCAGCGACCAGGGCGTACTCGGCGCCTTGCCGGGCGAACTCG CCAGCGGTGCCGCCCAGGTCCTGGTGGTCGGCGACGCCGATGCCGACACCACTCGCTTTGGCGATGCGCAACTGGTGCGC CTGAGCCTGGGCGCGGTGCTGGACGACCCGGCCGCTGCGATCGGCAAGCTGGCCGCCCACGCCGACCCGGCCGTCGCCGG CAGTCCCGGTGGCGCCGCCAGCGACAGCAAGCGCATCGTCGCCATCACCTCCTGCCCTACCGGCATCGCGCACACCTTCA TGGCCGCCGAAGGCCTGCAGCAGGCCGCCAAGAAGCTCGGCTACCAGATGCGGGTGGAAACCCAGGGCTCGGTGGGTGCG CAGGACGCGCTCACCGACGATGAAATCCGTGCGGCAGACGTGGTCATCATCGCGGCCGACCGCGAGGTCGACCTGGCCCG CTTCGGCGGCAAGCGCGTGTTCAAGAGCGGCACCAAGCCGGCGATCAACGATGGCCCGGCGCTGATCAACAAGGCCCTGG CCGAGGCCAGCGTGCAGGGCGGCGCCATGCCCGCCACCGGCAGCGCTGCCAGCGCCGCGGGGAACAAGGGCAATGGCCGC ACCGGCGCCTACAAGCACCTGATGACCGGCGTCTCGTTCATGCTGCCGTTCGTGACTGCCGGCGGCCTGCTGATTGCGCT GGCCTTTGCGCTGGGCGGCATCTACGCCGGCGACGATGCGCACCAGGGCACGTTGGCCTGGTCGCTGTTCCAGATCGGCG CCAAGGCCGGCTTCACCCTGATGGTGCCGGCCCTGGCCGGTTACATCGCCTACTCCATCGCCGACCGCCCCGGCATCGCG CCCGGCATGATCGGCGGCCTGGTGGCGGCCAATCTCAATGCCGGTTTCCTCGGCGGGATCATTGCCGGTTTCATCGCCGG CTACGGCGTGGCTGCGCTCAACCGCTACGTCCGCCTGCCGCGCAACCTGGAAGGCCTCAAGCCGGTGCTGATCCTGCCGG TGCTGGGCACCCTGCTGGTCGGGCTGGCGATGATGTACGTGTTCGGCCAGCCGGTGGCCGACCTGCTGGCCTGGCTCACC GCCTGGCTGCGCGGCATGCAGGGCAGCAGCGCGTTGCTGCTGGGCCTGCTGCTCGGCGGCATGATGGCCTTCGACATGGG CGGGCCGGTCAACAAGGCGGCCTATGCGTTTTCCACCGGCCTGATCGCCAGCCAGGTCTATACCCCGATGGCCGCTGCCA TGGTGGCCGGCATGACCCCGCCGCTGGGCATCGCGCTGGCGACCTGGGTGTTCCGCAACCGCTTCACCGCCGAAGAACGC GGCTCGGCCACTGCCGCCGGCGTGCTCGGGCTGGCCTTCGTCACCGAAGGCGCCATCCCGTACGCTGCGCGCGACCCATT GCGCACCATCCCGGCGCTGGTGATCGGCTCGGCCGTGGCCGGCGCCATCTCGATGACCGCCGGTGCCGAATTGAAGGCGC CGCATGGCGGCATCTTCGTGCTGCTGATCCCCAACGCCGTCACCCACCTGCTCAACTACGTGCTGGCCCTGGCGGTCGGC GTCGTGGTCACGGCCATCGCGCTGCGCCTGCTCAAGAAACCGGTGACCGACGTCGTCGCCTGA
Upstream 100 bases:
>100_bases GTTGCAGACAGCGGCAGATCGCGCGCATCACCGCCACGCATAACGCTTGAAATTCCCCCGCCGACAACACCGGCGACCGC AACACAGCAGGAGTTTTGCC
Downstream 100 bases:
>100_bases TCCAGCAACGGCGGCACGGACCTGCCGCCGCACCTGACGCGCCCGAGTGTTCCCGCGCGCCCCTGACCTGCTTCACCGCT GCGCTGCGCCCCCAGGTGCG
Product: PTS system fructose-specific transporter subunit IIBC
Products: NA
Alternate protein names: EIIBC-Fru; EII-Fru; Fructose-specific phosphotransferase enzyme IIB component; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 580; Mature: 579
Protein sequence:
>580_residues MSSSIVVIAAGERSTEAVLAAEALRRAATAAGRRVTIEIRSDQGVLGALPGELASGAAQVLVVGDADADTTRFGDAQLVR LSLGAVLDDPAAAIGKLAAHADPAVAGSPGGAASDSKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGA QDALTDDEIRAADVVIIAADREVDLARFGGKRVFKSGTKPAINDGPALINKALAEASVQGGAMPATGSAASAAGNKGNGR TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAYSIADRPGIA PGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYVRLPRNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLT AWLRGMQGSSALLLGLLLGGMMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPNAVTHLLNYVLALAVG VVVTAIALRLLKKPVTDVVA
Sequences:
>Translated_580_residues MSSSIVVIAAGERSTEAVLAAEALRRAATAAGRRVTIEIRSDQGVLGALPGELASGAAQVLVVGDADADTTRFGDAQLVR LSLGAVLDDPAAAIGKLAAHADPAVAGSPGGAASDSKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGA QDALTDDEIRAADVVIIAADREVDLARFGGKRVFKSGTKPAINDGPALINKALAEASVQGGAMPATGSAASAAGNKGNGR TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAYSIADRPGIA PGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYVRLPRNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLT AWLRGMQGSSALLLGLLLGGMMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPNAVTHLLNYVLALAVG VVVTAIALRLLKKPVTDVVA >Mature_579_residues SSSIVVIAAGERSTEAVLAAEALRRAATAAGRRVTIEIRSDQGVLGALPGELASGAAQVLVVGDADADTTRFGDAQLVRL SLGAVLDDPAAAIGKLAAHADPAVAGSPGGAASDSKRIVAITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQ DALTDDEIRAADVVIIAADREVDLARFGGKRVFKSGTKPAINDGPALINKALAEASVQGGAMPATGSAASAAGNKGNGRT GAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTLMVPALAGYIAYSIADRPGIAP GMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYVRLPRNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTA WLRGMQGSSALLLGLLLGGMMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEERG SATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFVLLIPNAVTHLLNYVLALAVGV VVTAIALRLLKKPVTDVVA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=554, Percent_Identity=48.5559566787004, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1786951, Length=504, Percent_Identity=36.9047619047619, Blast_Score=279, Evalue=4e-76, Organism=Escherichia coli, GI87082348, Length=472, Percent_Identity=36.228813559322, Blast_Score=249, Evalue=4e-67, Organism=Escherichia coli, GI1790386, Length=297, Percent_Identity=47.8114478114478, Blast_Score=242, Evalue=6e-65, Organism=Escherichia coli, GI1788729, Length=404, Percent_Identity=27.2277227722772, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790387, Length=95, Percent_Identity=41.0526315789474, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788730, Length=98, Percent_Identity=38.7755102040816, Blast_Score=72, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 58569; Mature: 58438
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSIVVIAAGERSTEAVLAAEALRRAATAAGRRVTIEIRSDQGVLGALPGELASGAAQV CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHCCCCEEE LVVGDADADTTRFGDAQLVRLSLGAVLDDPAAAIGKLAAHADPAVAGSPGGAASDSKRIV EEEECCCCCCCCCCCHHEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE AITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQDALTDDEIRAADVVIIAAD EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC REVDLARFGGKRVFKSGTKPAINDGPALINKALAEASVQGGAMPATGSAASAAGNKGNGR CCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCC TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCEE MVPALAGYIAYSIADRPGIAPGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYVRLP EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTAWLRGMQGSSALLLGLLLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHC GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFV CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEE LLIPNAVTHLLNYVLALAVGVVVTAIALRLLKKPVTDVVA EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSSIVVIAAGERSTEAVLAAEALRRAATAAGRRVTIEIRSDQGVLGALPGELASGAAQV CCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHCCCCEEE LVVGDADADTTRFGDAQLVRLSLGAVLDDPAAAIGKLAAHADPAVAGSPGGAASDSKRIV EEEECCCCCCCCCCCHHEEEEHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE AITSCPTGIAHTFMAAEGLQQAAKKLGYQMRVETQGSVGAQDALTDDEIRAADVVIIAAD EEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEECC REVDLARFGGKRVFKSGTKPAINDGPALINKALAEASVQGGAMPATGSAASAAGNKGNGR CCCHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCC TGAYKHLMTGVSFMLPFVTAGGLLIALAFALGGIYAGDDAHQGTLAWSLFQIGAKAGFTL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHCCCEE MVPALAGYIAYSIADRPGIAPGMIGGLVAANLNAGFLGGIIAGFIAGYGVAALNRYVRLP EHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RNLEGLKPVLILPVLGTLLVGLAMMYVFGQPVADLLAWLTAWLRGMQGSSALLLGLLLGG CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH MMAFDMGGPVNKAAYAFSTGLIASQVYTPMAAAMVAGMTPPLGIALATWVFRNRFTAEER HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHC GSATAAGVLGLAFVTEGAIPYAARDPLRTIPALVIGSAVAGAISMTAGAELKAPHGGIFV CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEE LLIPNAVTHLLNYVLALAVGVVVTAIALRLLKKPVTDVVA EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1655739; 12024217; 1650911 [H]