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The map label for this gene is fdsC

Identifier: 21243220

GI number: 21243220

Start: 2896912

End: 2897757

Strand: Reverse

Name: fdsC

Synonym: XAC2487

Alternate gene names: 21243220

Gene position: 2897757-2896912 (Counterclockwise)

Preceding gene: 21243221

Following gene: 21243219

Centisome position: 55.99

GC content: 66.55

Gene sequence:

>846_bases
ATGACCAGTCCGTCTTCCCGCTCCGTGCGTCCCGGCAGTGTGGTGCGCACGGTCCGTCGCCATCGCGGCGGCCGCAGCGC
CACGGTGCAGGATATGGTGGCGGCCGAAATGCCGGTCGCCTTCATCTACAACGGCGTGCCGTTCGCGGTGATGATGGCCA
CGCCGGAGGACCTGGAGGATTTCGCACTCGGGTTCTCATTGAGCGAAGGCATCGTCGATCACGCGCAGGACTTGCGCGTG
ATCGCGGTGGAGACGTTTCTGGAAGGCGCTTCGCTGCAGATCGAAATCCCGCCCGAGCGGGCAGCCGCGTTGCACCAGCG
GCGGCGCAATCTGGACGGGCGCAGCGGTTGCGGGGTGTGCGGCAACGAGTCCATCGAAGCGGTGCTGCGTGTGCCGCCGG
TGCTGCAATCGTCCCTGCAGATCGACGTGGATGCCTTGGCGCATGCGTTGGATGCGCTGCACGCACGGCAGCCCATCGCC
GCGCAGACCGGCGCCGTGCACGCGGCCGGTTGGGCCGATGCGCAGGGCAATGTGCAGCTGGTCCGCGAAGACGTGGGCCG
GCATAACGCCTTGGATAAAGTGATCGGTGCATTGGCGCGCGCGCGCATCGATGCATCGCACGGGTTTGCGGTGGTCACCA
GCCGCGCCAGCTTTGAGATGGCCATGAAAGCCGCGCAGGCCCGAATTCCGCTGCTCGCAGCGATTTCGGCGCCTACTGCG
CTGGCGATCAGCCTGGCCGAAAGTGCGGGACTGACCCTGATCGGGTTTGCCCGCGATCACGATTGTGTCGTTTACAGCCA
TCCGCAGCGCCTGGATCTGGGCGTTGCCGTGGGAGAGCCCGCATGA

Upstream 100 bases:

>100_bases
CGTCCTGGTCGCGTTTGCGTGGCTGGCGGTGGGTATCCCGATGCTGTTCGGTATCTGGGTCACGCTGCAAAAAGCCTTCG
TGCTGTTCCATTGAGATGAG

Downstream 100 bases:

>100_bases
GCAAGAAAACCATCAAGCAGTACGACAATCCCGCGGGCGGCTGGGGCGCATTGCGCTCGGTGGCCAAGCACCTGATGGAA
CAGGACATCGCCGTGCAGGG

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHAQDLRV
IAVETFLEGASLQIEIPPERAAALHQRRRNLDGRSGCGVCGNESIEAVLRVPPVLQSSLQIDVDALAHALDALHARQPIA
AQTGAVHAAGWADAQGNVQLVREDVGRHNALDKVIGALARARIDASHGFAVVTSRASFEMAMKAAQARIPLLAAISAPTA
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA

Sequences:

>Translated_281_residues
MTSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHAQDLRV
IAVETFLEGASLQIEIPPERAAALHQRRRNLDGRSGCGVCGNESIEAVLRVPPVLQSSLQIDVDALAHALDALHARQPIA
AQTGAVHAAGWADAQGNVQLVREDVGRHNALDKVIGALARARIDASHGFAVVTSRASFEMAMKAAQARIPLLAAISAPTA
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
>Mature_280_residues
TSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLEDFALGFSLSEGIVDHAQDLRVI
AVETFLEGASLQIEIPPERAAALHQRRRNLDGRSGCGVCGNESIEAVLRVPPVLQSSLQIDVDALAHALDALHARQPIAA
QTGAVHAAGWADAQGNVQLVREDVGRHNALDKVIGALARARIDASHGFAVVTSRASFEMAMKAAQARIPLLAAISAPTAL
AISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA

Specific function: Necessary for formate dehydrogenase activity

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family

Homologues:

Organism=Escherichia coli, GI1790329, Length=241, Percent_Identity=44.3983402489627, Blast_Score=201, Evalue=5e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): FDHD_XANAC (Q8PJP3)

Other databases:

- EMBL:   AE008923
- RefSeq:   NP_642802.1
- ProteinModelPortal:   Q8PJP3
- SMR:   Q8PJP3
- GeneID:   1156558
- GenomeReviews:   AE008923_GR
- KEGG:   xac:XAC2487
- NMPDR:   fig|190486.1.peg.2446
- HOGENOM:   HBG732883
- OMA:   GRAHTAN
- ProtClustDB:   PRK00724
- BioCyc:   XAXO190486:XAC2487-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00187
- InterPro:   IPR003786
- TIGRFAMs:   TIGR00129

Pfam domain/function: PF02634 FdhD-NarQ

EC number: NA

Molecular weight: Translated: 29652; Mature: 29521

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLED
CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHH
FALGFSLSEGIVDHAQDLRVIAVETFLEGASLQIEIPPERAAALHQRRRNLDGRSGCGVC
HHHCCCHHHHHHHHHHCCEEEEEEHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
GNESIEAVLRVPPVLQSSLQIDVDALAHALDALHARQPIAAQTGAVHAAGWADAQGNVQL
CCHHHHHHHHCCHHHHHHHEECHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHH
VREDVGRHNALDKVIGALARARIDASHGFAVVTSRASFEMAMKAAQARIPLLAAISAPTA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCHH
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
HEEEHHCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCC
>Mature Secondary Structure 
TSPSSRSVRPGSVVRTVRRHRGGRSATVQDMVAAEMPVAFIYNGVPFAVMMATPEDLED
CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHH
FALGFSLSEGIVDHAQDLRVIAVETFLEGASLQIEIPPERAAALHQRRRNLDGRSGCGVC
HHHCCCHHHHHHHHHHCCEEEEEEHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCC
GNESIEAVLRVPPVLQSSLQIDVDALAHALDALHARQPIAAQTGAVHAAGWADAQGNVQL
CCHHHHHHHHCCHHHHHHHEECHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCHHH
VREDVGRHNALDKVIGALARARIDASHGFAVVTSRASFEMAMKAAQARIPLLAAISAPTA
HHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCEEEECCCCHH
LAISLAESAGLTLIGFARDHDCVVYSHPQRLDLGVAVGEPA
HEEEHHCCCCEEEEEECCCCCEEEEECCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217