| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cheW [H]
Identifier: 21243180
GI number: 21243180
Start: 2848442
End: 2848951
Strand: Reverse
Name: cheW [H]
Synonym: XAC2447
Alternate gene names: 21243180
Gene position: 2848951-2848442 (Counterclockwise)
Preceding gene: 21243181
Following gene: 21243174
Centisome position: 55.05
GC content: 64.71
Gene sequence:
>510_bases ATGACCGCACCGACGCTTGATGTGATGCCCGGCGACGCCGATGTCGCCGCGCAATATCTGACCTTTCAACTGGATGGCGA AACCTTCGCCACCAGCATTCTCGGCATTCGCGAGATCATTCAGTACCGCGCTCCCACACCGGTGCCGTCGATGCCGGATT GCGTGCGCGGGGTGATCAATCTACGCGGCGCGGTAGTGCCGGTGGTGGACCTGCAATCGCGGCTGGGGCGCGCGGGCAGC GCGATCGGCAAACGCAGCTGCATCGTGATTCTGGCCACCGAGCAGGCGCAGGGCACGCAGGTGATTGGGGTGCTGGTGGA TGCGGTCAATGCAGTGATCGAACTGGCCGACCAGGACATCGAAGCGGCGCCGTCGTTCGGCACGCATATCCGCCGCGATC TGCTGCGCGGCATGGGCAAGGTCGGCGAGCGCTTTGTGGTACTGCTGGAGATGGAGCAGGTGCTGCAGGTGGACGAGATC GCCGGAAACACCGACGCACTGGCGGCCTGA
Upstream 100 bases:
>100_bases CGGCGGGCACGCGTGGCTGGCGCAGCAACGCAGCGCCGGCGTATGCGATGTCCGAGGGCCCCGACGAAGGCCAGTTCGCG CGTTTCTGAGAGAGCGACCA
Downstream 100 bases:
>100_bases GCGACAGCCGTGCCGCAGGGCGATCGGCGCGGGCTGCGTCGATCAGGCCCGCAGCTGCCACCCGTCGAAGCAATGCACGC GGTTGCGGCCATCGTCACGC
Product: chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTAPTLDVMPGDADVAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPDCVRGVINLRGAVVPVVDLQSRLGRAGS AIGKRSCIVILATEQAQGTQVIGVLVDAVNAVIELADQDIEAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLQVDEI AGNTDALAA
Sequences:
>Translated_169_residues MTAPTLDVMPGDADVAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPDCVRGVINLRGAVVPVVDLQSRLGRAGS AIGKRSCIVILATEQAQGTQVIGVLVDAVNAVIELADQDIEAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLQVDEI AGNTDALAA >Mature_168_residues TAPTLDVMPGDADVAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPDCVRGVINLRGAVVPVVDLQSRLGRAGSA IGKRSCIVILATEQAQGTQVIGVLVDAVNAVIELADQDIEAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLQVDEIA GNTDALAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=144, Percent_Identity=31.25, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17926; Mature: 17795
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTLDVMPGDADVAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPDCVRGVIN CCCCCCCCCCCCHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRGAVVPVVDLQSRLGRAGSAIGKRSCIVILATEQAQGTQVIGVLVDAVNAVIELADQDI HCCCEEHHHHHHHHHCHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLQVDEIAGNTDALAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TAPTLDVMPGDADVAAQYLTFQLDGETFATSILGIREIIQYRAPTPVPSMPDCVRGVIN CCCCCCCCCCCHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH LRGAVVPVVDLQSRLGRAGSAIGKRSCIVILATEQAQGTQVIGVLVDAVNAVIELADQDI HCCCEEHHHHHHHHHCHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC EAAPSFGTHIRRDLLRGMGKVGERFVVLLEMEQVLQVDEIAGNTDALAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7623670; 11481430 [H]