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The map label for this gene is 21243172

Identifier: 21243172

GI number: 21243172

Start: 2838638

End: 2839048

Strand: Direct

Name: 21243172

Synonym: XAC2439

Alternate gene names: NA

Gene position: 2838638-2839048 (Clockwise)

Preceding gene: 21243171

Following gene: 21243175

Centisome position: 54.85

GC content: 61.31

Gene sequence:

>411_bases
GTGGGCGTCATGGGCTGGGAACTAATGCACCTATTCTCATACCAGGACGGGCGCGGCTACGGTAGTCAGATCAGTAGCGA
GTTGCGGTTGCGCGATGTATGCCGCGTCGGTGACGCGCTTACCTACACCTACGACTTTAGCGACAACTGGCAGCACCGGG
TGACAGTCGAGAAGACAATGGCAAGGCCGACGGGAACCTACCCGCGCGTGATTGCCGGCAAATATGCCTGCCCACCGGAA
GATTGTGGCGGGCCGTGGGGTTATGGGGACATGCTCAGGGTACTCGCTGGTCACCGCAACGCCCGCCGACGCGAACTCGT
CGAGTGGCTAGGCGGACCGTTCAATCCCAAGACGTTCGATATGGATGAAGCCAGGGAGCGCCTGGCTGAGTACGTCGCGG
CGTCTGGGTGA

Upstream 100 bases:

>100_bases
ACCTGCAAAGTTATGAGAAATGGCATTTTTCATGGCATCCATGCTGAGCTATTTTGCAAGTCATTGATTTAATTGGTTTT
TTCACGCAAAACACAATCGA

Downstream 100 bases:

>100_bases
CGGAATTTTCTGGGGTTCCGGCTTACATCCCCGTTTGCTTCGCTGCTGCCGCTGCTTTGGCACGCCGCAACGCTCGTTGC
TCGGCGTCTCGAAGCCGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MGVMGWELMHLFSYQDGRGYGSQISSELRLRDVCRVGDALTYTYDFSDNWQHRVTVEKTMARPTGTYPRVIAGKYACPPE
DCGGPWGYGDMLRVLAGHRNARRRELVEWLGGPFNPKTFDMDEARERLAEYVAASG

Sequences:

>Translated_136_residues
MGVMGWELMHLFSYQDGRGYGSQISSELRLRDVCRVGDALTYTYDFSDNWQHRVTVEKTMARPTGTYPRVIAGKYACPPE
DCGGPWGYGDMLRVLAGHRNARRRELVEWLGGPFNPKTFDMDEARERLAEYVAASG
>Mature_135_residues
GVMGWELMHLFSYQDGRGYGSQISSELRLRDVCRVGDALTYTYDFSDNWQHRVTVEKTMARPTGTYPRVIAGKYACPPED
CGGPWGYGDMLRVLAGHRNARRRELVEWLGGPFNPKTFDMDEARERLAEYVAASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 15445; Mature: 15313

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVMGWELMHLFSYQDGRGYGSQISSELRLRDVCRVGDALTYTYDFSDNWQHRVTVEKTM
CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHH
ARPTGTYPRVIAGKYACPPEDCGGPWGYGDMLRVLAGHRNARRRELVEWLGGPFNPKTFD
CCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
MDEARERLAEYVAASG
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GVMGWELMHLFSYQDGRGYGSQISSELRLRDVCRVGDALTYTYDFSDNWQHRVTVEKTM
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEHHHHH
ARPTGTYPRVIAGKYACPPEDCGGPWGYGDMLRVLAGHRNARRRELVEWLGGPFNPKTFD
CCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC
MDEARERLAEYVAASG
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]