| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243175
Identifier: 21243175
GI number: 21243175
Start: 2842206
End: 2842691
Strand: Direct
Name: 21243175
Synonym: XAC2442
Alternate gene names: NA
Gene position: 2842206-2842691 (Clockwise)
Preceding gene: 21243172
Following gene: 21243176
Centisome position: 54.92
GC content: 59.26
Gene sequence:
>486_bases ATGAGCCGAAAGACGCGCTTCCGGCCAGCCTTCCAAGAGAATATTGGGTACGTGCCTTTGCTGAGGCGATTCCGGATGGT TTGCGGCGCTTCGCTGGTAATCTCCGCCACCTGCGCAATTGACAGGGCGGGAGGGTACAGCGATGACAAGTACGGAAGTG AGCTGCCGGCATGCCCGGCAAAAAACGGAGGTTTGGAGCGTTGCATGGACGTACGCCTTCTGCAATCGCCCCATCGCCTG CCGTACGGGTCAGGTGGCAAAAGGAAACGTACGTATTCGTCAACGGTGCCCCCGCGCCCAGGGGTATGTACAGATGTCGC GGTGTGCGGCGCTGTGTGTTCGTTCCGGTCTTGCAGCTATCCTCTCAGGGAAGCGTCCGCGCGCGCATCTGTACATCGAG TCGGTACTCGCCATCGATCCGTCGATTCATCGATGGTTTTCCTTGCAGGTTCTTCTTCGCTCCGCCGATGCCTGCTCGAT CGGTAG
Upstream 100 bases:
>100_bases TACCTGCTGGACCTTCGTCGGCCGGCCGCGTCGGGCTGGCCGATTGGCCGGATTGGACGGGTCAACGGCAATTTGCTGAT CGATAAACGCGGCAACATCG
Downstream 100 bases:
>100_bases AGCGGCCTCAAAGAGGCATCAGTGCTCTGTCGCTGGCTCTGCCCGGAAACGTCAACCGGGGTTATTTCCGGTCTGACGGT CTGCCTATGCAGCCCGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSRKTRFRPAFQENIGYVPLLRRFRMVCGASLVISATCAIDRAGGYSDDKYGSELPACPAKNGGLERCMDVRLLQSPHRL PYGSGGKRKRTYSSTVPPRPGVCTDVAVCGAVCSFRSCSYPLREASARASVHRVGTRHRSVDSSMVFLAGSSSLRRCLLD R
Sequences:
>Translated_161_residues MSRKTRFRPAFQENIGYVPLLRRFRMVCGASLVISATCAIDRAGGYSDDKYGSELPACPAKNGGLERCMDVRLLQSPHRL PYGSGGKRKRTYSSTVPPRPGVCTDVAVCGAVCSFRSCSYPLREASARASVHRVGTRHRSVDSSMVFLAGSSSLRRCLLD R >Mature_160_residues SRKTRFRPAFQENIGYVPLLRRFRMVCGASLVISATCAIDRAGGYSDDKYGSELPACPAKNGGLERCMDVRLLQSPHRLP YGSGGKRKRTYSSTVPPRPGVCTDVAVCGAVCSFRSCSYPLREASARASVHRVGTRHRSVDSSMVFLAGSSSLRRCLLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17623; Mature: 17491
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKTRFRPAFQENIGYVPLLRRFRMVCGASLVISATCAIDRAGGYSDDKYGSELPACPA CCCCCCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KNGGLERCMDVRLLQSPHRLPYGSGGKRKRTYSSTVPPRPGVCTDVAVCGAVCSFRSCSY CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PLREASARASVHRVGTRHRSVDSSMVFLAGSSSLRRCLLDR CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCC >Mature Secondary Structure SRKTRFRPAFQENIGYVPLLRRFRMVCGASLVISATCAIDRAGGYSDDKYGSELPACPA CCCCCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC KNGGLERCMDVRLLQSPHRLPYGSGGKRKRTYSSTVPPRPGVCTDVAVCGAVCSFRSCSY CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PLREASARASVHRVGTRHRSVDSSMVFLAGSSSLRRCLLDR CHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA