| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is gluQ
Identifier: 21243134
GI number: 21243134
Start: 2796385
End: 2797284
Strand: Direct
Name: gluQ
Synonym: XAC2400
Alternate gene names: 21243134
Gene position: 2796385-2797284 (Clockwise)
Preceding gene: 21243132
Following gene: 21243135
Centisome position: 54.03
GC content: 70.33
Gene sequence:
>900_bases ATGCCTTCGCCCCCTTATCTCGGCCGCTTCGCGCCCTCGCCCACCGGCCCCCTGCACTTCGGCTCCCTGCTGGCTGCATT CGGCAGCTGGCTGCTGGCCCGGCATGCCGGTGGGCAGTGGTGCGTGCGCATCGAAGACATCGATCCGCCGCGTGCCGAGC CCGGTGCCTGTGAACGTCAGCTGCGCACGCTGGCCGCATTCGGGCTGCACTCGGACCTGCCGGTAATTCGGCAGTCCGAG CGCGATGCGGCCTACACCGCGGCAATCACCCGGCTGCTGCAGACCGGCCAGGCATTCGAATGCAGCTGCAGCCGTGCCGA TCTGGCCGGCATGGGCGGCATCCACCACGCCTGCGTTGCGCCGCTGGGCGAGCGCCGTGCGGTGCGCCTGCGGGTGCCGC CGCAACCACCGGTCGGCTTCGACGACGCCTTACAAGGCCCGGTACTGCAGGATGTCTACGCCGAGGTGGGCGATGTGGTG TTGCGCCGCGCCGATGGGTATTGGGCGTACCAACTGGCGGTGGTGGTGGACGATGCGGCGCAGGGCATCACCGACGTGGT GCGCGGCGCCGACCTGCTCGACTCCACCCCGCGCCAGATGGTGCTGCAGCGCGCACTGGGCCTGCCGCAGCCGCGCTACT TGCACCTGCCGCTGATGCTGGATCGCGACGGCCGCAAGCTGTCCAAGTCACACGATGCACCCGCGCTGGACGACGCCGAT CCACTGCCGGCCCTGCACGCCGCCTGGGCGGCCCTGGGTCAAGAGTCCGACGCGCTGCCGCGGCATGCAGCCGTGGAAAC CGTGCTGCAGCACGCCGTGCAGCATTTTTCGCCACGGCTGCTTCCGCGCCAACGCGAGCTGGACCTCGATGAGCGCGCAT CCGGCCTCCAGCGTGACTAG
Upstream 100 bases:
>100_bases CATGGCGCGATGGCTCCACGGATGCGGGGTGAACTGTTGCGGATCTGCGGGTGTTGCGGCTTGAAATCAAGCAAGCACCT GACCGACGATTCAGCTGCCC
Downstream 100 bases:
>100_bases AATTGCGGCCCAGCAACGGCATCCGGGCGCAGCACCCCGCGCCCCAATCGCCCTCAGCCTCACTTGTTGATTGGAGTCGT CATGACATCTCGCGTCGCAT
Product: aminoacyl-tRNA synthetase:glutamyl-like protein
Products: NA
Alternate protein names: Glu-Q-RSs
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MPSPPYLGRFAPSPTGPLHFGSLLAAFGSWLLARHAGGQWCVRIEDIDPPRAEPGACERQLRTLAAFGLHSDLPVIRQSE RDAAYTAAITRLLQTGQAFECSCSRADLAGMGGIHHACVAPLGERRAVRLRVPPQPPVGFDDALQGPVLQDVYAEVGDVV LRRADGYWAYQLAVVVDDAAQGITDVVRGADLLDSTPRQMVLQRALGLPQPRYLHLPLMLDRDGRKLSKSHDAPALDDAD PLPALHAAWAALGQESDALPRHAAVETVLQHAVQHFSPRLLPRQRELDLDERASGLQRD
Sequences:
>Translated_299_residues MPSPPYLGRFAPSPTGPLHFGSLLAAFGSWLLARHAGGQWCVRIEDIDPPRAEPGACERQLRTLAAFGLHSDLPVIRQSE RDAAYTAAITRLLQTGQAFECSCSRADLAGMGGIHHACVAPLGERRAVRLRVPPQPPVGFDDALQGPVLQDVYAEVGDVV LRRADGYWAYQLAVVVDDAAQGITDVVRGADLLDSTPRQMVLQRALGLPQPRYLHLPLMLDRDGRKLSKSHDAPALDDAD PLPALHAAWAALGQESDALPRHAAVETVLQHAVQHFSPRLLPRQRELDLDERASGLQRD >Mature_298_residues PSPPYLGRFAPSPTGPLHFGSLLAAFGSWLLARHAGGQWCVRIEDIDPPRAEPGACERQLRTLAAFGLHSDLPVIRQSER DAAYTAAITRLLQTGQAFECSCSRADLAGMGGIHHACVAPLGERRAVRLRVPPQPPVGFDDALQGPVLQDVYAEVGDVVL RRADGYWAYQLAVVVDDAAQGITDVVRGADLLDSTPRQMVLQRALGLPQPRYLHLPLMLDRDGRKLSKSHDAPALDDADP LPALHAAWAALGQESDALPRHAAVETVLQHAVQHFSPRLLPRQRELDLDERASGLQRD
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily
Homologues:
Organism=Homo sapiens, GI134288884, Length=248, Percent_Identity=36.2903225806452, Blast_Score=131, Evalue=6e-31, Organism=Escherichia coli, GI226510925, Length=285, Percent_Identity=47.3684210526316, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI1788743, Length=247, Percent_Identity=36.8421052631579, Blast_Score=155, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71993394, Length=313, Percent_Identity=32.2683706070287, Blast_Score=127, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6324540, Length=264, Percent_Identity=35.2272727272727, Blast_Score=147, Evalue=2e-36, Organism=Drosophila melanogaster, GI24665321, Length=249, Percent_Identity=35.7429718875502, Blast_Score=137, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLUQ_XANAC (Q8PJX7)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642716.1 - ProteinModelPortal: Q8PJX7 - SMR: Q8PJX7 - GeneID: 1156471 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2400 - NMPDR: fig|190486.1.peg.2360 - HOGENOM: HBG628189 - OMA: DWPRDPD - ProtClustDB: PRK05710 - BioCyc: XAXO190486:XAC2400-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_01428 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR03838
Pfam domain/function: PF00749 tRNA-synt_1c
EC number: NA
Molecular weight: Translated: 32522; Mature: 32391
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 45-45 BINDING 170-170 BINDING 188-188 BINDING 229-229
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPPYLGRFAPSPTGPLHFGSLLAAFGSWLLARHAGGQWCVRIEDIDPPRAEPGACERQ CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH LRTLAAFGLHSDLPVIRQSERDAAYTAAITRLLQTGQAFECSCSRADLAGMGGIHHACVA HHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHC PLGERRAVRLRVPPQPPVGFDDALQGPVLQDVYAEVGDVVLRRADGYWAYQLAVVVDDAA CCCCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHH QGITDVVRGADLLDSTPRQMVLQRALGLPQPRYLHLPLMLDRDGRKLSKSHDAPALDDAD HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCC PLPALHAAWAALGQESDALPRHAAVETVLQHAVQHFSPRLLPRQRELDLDERASGLQRD CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHCCCCCC >Mature Secondary Structure PSPPYLGRFAPSPTGPLHFGSLLAAFGSWLLARHAGGQWCVRIEDIDPPRAEPGACERQ CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHH LRTLAAFGLHSDLPVIRQSERDAAYTAAITRLLQTGQAFECSCSRADLAGMGGIHHACVA HHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHC PLGERRAVRLRVPPQPPVGFDDALQGPVLQDVYAEVGDVVLRRADGYWAYQLAVVVDDAA CCCCCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHH QGITDVVRGADLLDSTPRQMVLQRALGLPQPRYLHLPLMLDRDGRKLSKSHDAPALDDAD HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCC PLPALHAAWAALGQESDALPRHAAVETVLQHAVQHFSPRLLPRQRELDLDERASGLQRD CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217