| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243122
Identifier: 21243122
GI number: 21243122
Start: 2782059
End: 2782484
Strand: Direct
Name: 21243122
Synonym: XAC2388
Alternate gene names: NA
Gene position: 2782059-2782484 (Clockwise)
Preceding gene: 77748652
Following gene: 21243124
Centisome position: 53.75
GC content: 65.49
Gene sequence:
>426_bases ATGAGCGCTGGCGACTTCGCGCTGGATCTGTCCGATCCGCAGCAATCGGGTGTGTATCAGGCCGAGACCGACGATCTGGA CACCATGGCCGCGCTCGCGCGCGATGCCGGCTTACGCATCTTGCGCGTGGATCTGACCACCTGCAGCGACAAACGCATGC TACTGATGCGCCTGGCCACGCAACTGGATTTCCCGGCCAGCTTCGGCCGCAACTGGGACGCGCTCAGCGATGCCCTGCGC GACCTGGCGTGGCTGCCTTCGCCAGATGGCTATGCACTGCTCATCGACGGCGCCCAGGCGCTGGCCAGCACGGCACCCAA CGACCGCGACACCTTGCTGGACATCCTCGATGAAGTCGCCAACGCCTGGGCATCACGCGGATTGACCTTTGCGGCGTTCG TTGCGCCCGCAAGCGCCTGCGACTGA
Upstream 100 bases:
>100_bases GCATCGTCACCGGCGGCACCCCGCCCGAGGCGTGGTACTACAGCGACGATCATTACCAGAGCTTCAAAGCCTTCGATGGC CCGACCCCGGACCAGGCACC
Downstream 100 bases:
>100_bases GAGCAGCCAGCAGAACGCCTGCGCAGCCGGCCCGAGCGGACACGCCTGGCACCGGCGCCACGCCCATTGCAGAAGCCCTG GCTTCATGCATGCCGCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSAGDFALDLSDPQQSGVYQAETDDLDTMAALARDAGLRILRVDLTTCSDKRMLLMRLATQLDFPASFGRNWDALSDALR DLAWLPSPDGYALLIDGAQALASTAPNDRDTLLDILDEVANAWASRGLTFAAFVAPASACD
Sequences:
>Translated_141_residues MSAGDFALDLSDPQQSGVYQAETDDLDTMAALARDAGLRILRVDLTTCSDKRMLLMRLATQLDFPASFGRNWDALSDALR DLAWLPSPDGYALLIDGAQALASTAPNDRDTLLDILDEVANAWASRGLTFAAFVAPASACD >Mature_140_residues SAGDFALDLSDPQQSGVYQAETDDLDTMAALARDAGLRILRVDLTTCSDKRMLLMRLATQLDFPASFGRNWDALSDALRD LAWLPSPDGYALLIDGAQALASTAPNDRDTLLDILDEVANAWASRGLTFAAFVAPASACD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15111; Mature: 14980
Theoretical pI: Translated: 3.87; Mature: 3.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAGDFALDLSDPQQSGVYQAETDDLDTMAALARDAGLRILRVDLTTCSDKRMLLMRLAT CCCCCEEEECCCCHHCCCEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH QLDFPASFGRNWDALSDALRDLAWLPSPDGYALLIDGAQALASTAPNDRDTLLDILDEVA HCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCHHHHHHHHHHHH NAWASRGLTFAAFVAPASACD HHHHHCCCEEEHHHCCCCCCC >Mature Secondary Structure SAGDFALDLSDPQQSGVYQAETDDLDTMAALARDAGLRILRVDLTTCSDKRMLLMRLAT CCCCEEEECCCCHHCCCEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHH QLDFPASFGRNWDALSDALRDLAWLPSPDGYALLIDGAQALASTAPNDRDTLLDILDEVA HCCCCHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHCCCCCHHHHHHHHHHHH NAWASRGLTFAAFVAPASACD HHHHHCCCEEEHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA