BacMap

Definition	Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession	NC_003919
Length	5,175,554

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The map label for this gene is dbpA [H]

Identifier: 21243124

GI number: 21243124

Start: 2784754

End: 2786130

Strand: Direct

Name: dbpA [H]

Synonym: XAC2390

Alternate gene names: 21243124

Gene position: 2784754-2786130 (Clockwise)

Preceding gene: 21243122

Following gene: 21243127

Centisome position: 53.81

GC content: 67.03

Gene sequence:

>1377_bases
ATGAACGAATTCTCCGCGCTGCCGCTGTCGCCGGCCCTGGCCCCCGGCATCGACGCCCTTGGCTACACCGTTTTGACTCC
CATCCAGGCGCATAGCCTGCCGCCGATCCTGCAGGGGCTCGATGTCATCGCGCAGGCGCCGACCGGCAGCGGCAAGACCG
CCGCGTTCGGACTGGGCCTGCTGCAAAAGCTCGACCCCGCGCTCACCCGCGCACAGGCGCTGGTGCTCTGCCCCACCCGC
GAATTGGCCGACCAGGTCGGCAAGCAGCTGCGTAAGCTCGCCACCGGTATCCCCAACATGAAGCTGGTGGTGCTCACCGG
CGGCATGCCGCTCGGGCCGCAGCTGGCCTCGCTGGAAGCGCACGACCCGCAAGTGGTGGTGGGTACGCCCGGGCGCATCC
AGGAGCTGGCCCGCAAACGCGCCCTGCACCTGGGCGGCGTGCGCACGCTGGTGCTGGACGAGGCCGACCGCATGCTCGAC
ATGGGCTTCGAAGAACCCATCCGCGAGATCGCCAGCCGTTGCGACAAACATCGTCAGAGCCTGCTGTTTTCGGCCACGTT
TCCGGACAGCATCCGCACGCTCGCACGCGAGCTGTTGAAAGAGCCCGTCGAGATCACCGTGGAAGGCGCCGATAGCGCAC
CGGAGATCGATCAGCAGTTCTTCGAGGTCGACCCGACCTATCGGCAAAAGGCCGTCGCCGGCCTGCTGCTGCGCTTCAAT
CCCGAATCCAGCGTGGTGTTCTGCAATACCCGCAAGGAAGTGGACGAGGTGGCGGGTTCGCTGCAGGAATTCGGCTTCTC
TGCACTTGCCTTGCATGGCGACATGGAACAGCGCGACCGTGACGAAGTGCTGGTGCGCTTCGTCAACCGCAGCTGCAACG
TCCTGGTGGCCAGCGACGTGGCCGCACGCGGGCTGGACGTGGAAGACCTTTCCGCCGTGGTCAACTACGAGCTGCCCACC
GATACCGAAACCTATCGCCACCGCATTGGCCGTACCGCACGCGCCGGCAAGCACGGGCTGGCGCTGAGCCTGGTTGCCCC
GCGCGAAACCGCCCGCGCGCAGGCATTGGAAACCGAACAAGGCCAGCCGTTGAAATGGTCGCGTGCACCGCTGGCCACTG
CGCGTCCGGCGCAACTGCCGCAGGCGGCAATGACCACCTTGCGCATCGACGGCGGCAAGACCGACAAGCTGCGCGCCGGC
GACATCCTGGGCGCCCTGACCGGCGAAGCCGGGCTCTCGGGCGCGGCAATCGGCAAGATCGCCATCTACCCTACCCGCTC
CTACGTGGCCATTGCCCGCGCGCAGGTCGCCAAGGCGCTGGCACACCTGCACGCAGGCAAGATCAAGGGACGCCGGTTTC
GGGTCAGCAAGCTCTGA

Upstream 100 bases:

>100_bases
GGCCAATTGTACGGGAATCGGGAATGGTGAATCGGGAATGGAAACGCCCTTGCCGCTGCGATTCCCGATTCCCCACTCCC
GATTCCCGCTAAAATGCCCC

Downstream 100 bases:

>100_bases
ACGCAGCGCGGCCGGCGTCGTGCCGGCCGCCGATGTTCAGCAGGAGCAATCCTGGAGGCAGGCGCTGCCACGCACCCAGG
GTCGCTTCCAGAGCTTGGAC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL

Sequences:

>Translated_458_residues
MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
>Mature_458_residues
MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTR
ELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEAHDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLD
MGFEEPIREIASRCDKHRQSLLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPT
DTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAG
DILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=415, Percent_Identity=38.5542168674699, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=36.6279069767442, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI20149629, Length=407, Percent_Identity=36.1179361179361, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI45446747, Length=390, Percent_Identity=37.9487179487179, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI45446743, Length=390, Percent_Identity=37.9487179487179, Blast_Score=229, Evalue=6e-60,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=33.7912087912088, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=37.5350140056022, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI262231852, Length=358, Percent_Identity=37.4301675977654, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI216548263, Length=358, Percent_Identity=37.4301675977654, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI13518015, Length=358, Percent_Identity=37.4301675977654, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI83700235, Length=360, Percent_Identity=35.8333333333333, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI4503529, Length=360, Percent_Identity=35, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI4758138, Length=346, Percent_Identity=37.8612716763006, Blast_Score=214, Evalue=1e-55,
Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=37.8016085790885, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=37.8016085790885, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=37.8016085790885, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI148613856, Length=345, Percent_Identity=36.231884057971, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI38201710, Length=345, Percent_Identity=36.231884057971, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=33.0508474576271, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI41327773, Length=347, Percent_Identity=36.0230547550432, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=36.1031518624642, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI31542656, Length=374, Percent_Identity=36.3636363636364, Blast_Score=209, Evalue=6e-54,
Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=37.2654155495979, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=37.2654155495979, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=35.4755784061697, Blast_Score=204, Evalue=9e-53,
Organism=Homo sapiens, GI41327771, Length=384, Percent_Identity=34.8958333333333, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI164419743, Length=358, Percent_Identity=37.9888268156425, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI51094101, Length=358, Percent_Identity=37.9888268156425, Blast_Score=202, Evalue=6e-52,
Organism=Homo sapiens, GI21071032, Length=360, Percent_Identity=36.1111111111111, Blast_Score=200, Evalue=2e-51,
Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=35.7348703170029, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=33.59375, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI6005743, Length=361, Percent_Identity=34.3490304709141, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI55749865, Length=360, Percent_Identity=31.3888888888889, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI8922886, Length=361, Percent_Identity=34.0720221606648, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI41327779, Length=391, Percent_Identity=31.9693094629156, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=37.0572207084469, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI41327776, Length=406, Percent_Identity=33.4975369458128, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI256223453, Length=354, Percent_Identity=31.0734463276836, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI62241022, Length=345, Percent_Identity=33.9130434782609, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=34.472049689441, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI38327634, Length=370, Percent_Identity=34.0540540540541, Blast_Score=168, Evalue=8e-42,
Organism=Homo sapiens, GI164419732, Length=348, Percent_Identity=31.3218390804598, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI17505907, Length=422, Percent_Identity=31.9905213270142, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI38569503, Length=334, Percent_Identity=30.5389221556886, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI38569505, Length=334, Percent_Identity=30.5389221556886, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=31.0880829015544, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=33.8557993730408, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=29.0419161676647, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI154759257, Length=424, Percent_Identity=27.8301886792453, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI256773275, Length=392, Percent_Identity=29.0816326530612, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=35.9090909090909, Blast_Score=106, Evalue=4e-23,
Organism=Homo sapiens, GI4557365, Length=97, Percent_Identity=34.020618556701, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=51.4161220043573, Blast_Score=439, Evalue=1e-124,
Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=42.9394812680115, Blast_Score=269, Evalue=3e-73,
Organism=Escherichia coli, GI1787016, Length=356, Percent_Identity=42.1348314606742, Blast_Score=252, Evalue=3e-68,
Organism=Escherichia coli, GI1788930, Length=333, Percent_Identity=42.042042042042, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1790214, Length=395, Percent_Identity=34.9367088607595, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI48994977, Length=372, Percent_Identity=25, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71995724, Length=344, Percent_Identity=39.8255813953488, Blast_Score=246, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI17507121, Length=344, Percent_Identity=39.8255813953488, Blast_Score=245, Evalue=3e-65,
Organism=Caenorhabditis elegans, GI71987143, Length=358, Percent_Identity=35.7541899441341, Blast_Score=234, Evalue=6e-62,
Organism=Caenorhabditis elegans, GI17555296, Length=366, Percent_Identity=36.8852459016393, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=380, Percent_Identity=35.5263157894737, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=35.7142857142857, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=35.5263157894737, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17552114, Length=357, Percent_Identity=33.0532212885154, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI86570094, Length=358, Percent_Identity=37.9888268156425, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI71982858, Length=355, Percent_Identity=32.112676056338, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=36.5789473684211, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=36.6946778711485, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=36.6576819407008, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=34.5454545454545, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI115533224, Length=368, Percent_Identity=36.6847826086957, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=371, Percent_Identity=35.8490566037736, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI115532548, Length=374, Percent_Identity=35.0267379679144, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=35.2785145888594, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71999646, Length=368, Percent_Identity=33.4239130434783, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=368, Percent_Identity=33.4239130434783, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=36.3881401617251, Blast_Score=197, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=35.3801169590643, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI17507881, Length=376, Percent_Identity=34.0425531914894, Blast_Score=187, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=356, Percent_Identity=34.2696629213483, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=32.2834645669291, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=376, Percent_Identity=32.7127659574468, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=376, Percent_Identity=32.7127659574468, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI193206561, Length=321, Percent_Identity=31.7757009345794, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17509811, Length=363, Percent_Identity=32.2314049586777, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17505370, Length=355, Percent_Identity=34.6478873239437, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=31.2997347480106, Blast_Score=158, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=398, Percent_Identity=28.643216080402, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=26.7605633802817, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=27.6699029126214, Blast_Score=141, Evalue=6e-34,
Organism=Caenorhabditis elegans, GI71990816, Length=350, Percent_Identity=32.2857142857143, Blast_Score=141, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI17507641, Length=395, Percent_Identity=28.6075949367089, Blast_Score=134, Evalue=8e-32,
Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=34.1708542713568, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=29.0322580645161, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=29.0909090909091, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=27.893175074184, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=360, Percent_Identity=28.0555555555556, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=400, Percent_Identity=26.25, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=98, Percent_Identity=39.7959183673469, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI25145561, Length=361, Percent_Identity=22.9916897506925, Blast_Score=65, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6320224, Length=358, Percent_Identity=36.8715083798883, Blast_Score=251, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=363, Percent_Identity=39.1184573002755, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6324778, Length=385, Percent_Identity=37.1428571428571, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=342, Percent_Identity=38.8888888888889, Blast_Score=220, Evalue=5e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=34.2541436464088, Blast_Score=217, Evalue=4e-57,
Organism=Saccharomyces cerevisiae, GI6324217, Length=340, Percent_Identity=37.6470588235294, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=346, Percent_Identity=37.2832369942197, Blast_Score=209, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320119, Length=353, Percent_Identity=32.2946175637394, Blast_Score=208, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=357, Percent_Identity=34.1736694677871, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6322323, Length=357, Percent_Identity=34.1736694677871, Blast_Score=207, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6323021, Length=383, Percent_Identity=35.509138381201, Blast_Score=206, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=32.0987654320988, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6324620, Length=363, Percent_Identity=33.6088154269972, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=36.9146005509642, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6319618, Length=457, Percent_Identity=31.2910284463895, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6321963, Length=373, Percent_Identity=34.0482573726542, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=29.7520661157025, Blast_Score=172, Evalue=1e-43,
Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=32.7777777777778, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6323947, Length=364, Percent_Identity=32.1428571428571, Blast_Score=168, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6319714, Length=370, Percent_Identity=30.5405405405405, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=29.6103896103896, Blast_Score=147, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6323306, Length=412, Percent_Identity=24.2718446601942, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6321267, Length=319, Percent_Identity=29.4670846394984, Blast_Score=134, Evalue=3e-32,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=25.5681818181818, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6322876, Length=183, Percent_Identity=30.0546448087432, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24645031, Length=345, Percent_Identity=38.5507246376812, Blast_Score=246, Evalue=2e-65,
Organism=Drosophila melanogaster, GI24585582, Length=363, Percent_Identity=36.9146005509642, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24662330, Length=337, Percent_Identity=40.9495548961424, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=33.7912087912088, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=33.7912087912088, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24584399, Length=363, Percent_Identity=37.7410468319559, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=37.2093023255814, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=37.7777777777778, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI21355075, Length=368, Percent_Identity=35.054347826087, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI28574962, Length=350, Percent_Identity=38, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=37.8531073446328, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24582080, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24582078, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI17136248, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI24582075, Length=347, Percent_Identity=35.4466858789625, Blast_Score=210, Evalue=2e-54,
Organism=Drosophila melanogaster, GI18857967, Length=352, Percent_Identity=36.3636363636364, Blast_Score=208, Evalue=7e-54,
Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=36.8563685636856, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=36.8715083798883, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=35.3099730458221, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=35.3099730458221, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.5795148247978, Blast_Score=204, Evalue=1e-52,
Organism=Drosophila melanogaster, GI24584994, Length=370, Percent_Identity=33.5135135135135, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24581954, Length=355, Percent_Identity=32.112676056338, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24581952, Length=355, Percent_Identity=32.112676056338, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI24581956, Length=355, Percent_Identity=32.112676056338, Blast_Score=196, Evalue=4e-50,
Organism=Drosophila melanogaster, GI17136814, Length=370, Percent_Identity=34.8648648648649, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI21355559, Length=377, Percent_Identity=33.42175066313, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281365720, Length=295, Percent_Identity=37.6271186440678, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=32.3943661971831, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=32.3943661971831, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI17647335, Length=361, Percent_Identity=27.7008310249307, Blast_Score=156, Evalue=3e-38,
Organism=Drosophila melanogaster, GI24642822, Length=376, Percent_Identity=31.1170212765957, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI28571338, Length=448, Percent_Identity=30.1339285714286, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI18859659, Length=448, Percent_Identity=30.1339285714286, Blast_Score=146, Evalue=3e-35,
Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=31.2312312312312, Blast_Score=143, Evalue=3e-34,
Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=27.3417721518987, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24666101, Length=358, Percent_Identity=31.0055865921788, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI20130173, Length=320, Percent_Identity=33.4375, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI19920478, Length=379, Percent_Identity=29.5514511873351, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI17136666, Length=386, Percent_Identity=27.4611398963731, Blast_Score=125, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49270; Mature: 49270

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGL
CCCCCCCCCCCCCCCCCHHCCHHHCCCHHHCCCCHHHHHHHHHEECCCCCCCHHHHHHHH
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
CCCEEEEECCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
EEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHEEEEEC
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCEEEECCH
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQ
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCCEEEEEECCCHHHHHHHHHCCC
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
CCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCEECCCHHHHHCCCCCCCCCEECEE
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
>Mature Secondary Structure
MNEFSALPLSPALAPGIDALGYTVLTPIQAHSLPPILQGLDVIAQAPTGSGKTAAFGLGL
CCCCCCCCCCCCCCCCCHHCCHHHCCCHHHCCCCHHHHHHHHHEECCCCCCCHHHHHHHH
LQKLDPALTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HHHHCHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCC
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
CCCEEEEECCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LLFSATFPDSIRTLARELLKEPVEITVEGADSAPEIDQQFFEVDPTYRQKAVAGLLLRFN
EEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHEEEEEC
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCHHHCCHHHHHHHHHCCCCCEEEECCH
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKHGLALSLVAPRETARAQALETEQ
HHCCCCHHHHHHHHCCCCCCCCHHHHHHHCCHHCCCCCCEEEEEECCCHHHHHHHHHCCC
GQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
CCCCCCCCCCCCCCCCCCCCHHHHHEEEECCCCCCCEECCCHHHHHCCCCCCCCCEECEE
AIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVSKL
EEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]