| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is mtaD [H]
Identifier: 21243112
GI number: 21243112
Start: 2771334
End: 2772683
Strand: Reverse
Name: mtaD [H]
Synonym: XAC2378
Alternate gene names: 21243112
Gene position: 2772683-2771334 (Counterclockwise)
Preceding gene: 77748651
Following gene: 21243111
Centisome position: 53.57
GC content: 65.56
Gene sequence:
>1350_bases ATGGATCCACTCATGACCAATGCCCCGCCCGAACCCTGCGACCTGCTGATTGAGGCCGGCTATGTCGTGCCGATCGAACC GCATGCGGTGGTGCTGGAAGACCACGCGGTGGCCGTCAGTCACGGCGTCATCGTTGCCGTGCTGCCGATTGCCGACGCGA GCGCGCGTTTTGCGCCCAAGCAGACCGTGTCGCGGCCCGATGCTGCGTTGATGCCCGGCCTGGTCAATGCGCATACGCAT AATCCGATGACGCTGCTGCGCGGCGTCGCCGACGACCTGCCGCTGATGGTGTGGTTGCAGCAGCACATCTGGCCGGTGGA AGCGGCGGTGATCGGGCCGGAATTCGTAGCTGATGGCACCACGCTGGCAATTGCCGAAATGCTGCGCGGCGGTACGACCT GCGTCAACGAAAACTACTTCTTCGCCGATGTGCAGGCGGCCGTCTACAAGCAGCATGGTTTCCGCGCGCTGGTGGGCGCG GTGATCATCGATTTCCCGACTGCATGGGCATCGTCGGACGATGAATACTTCGCGCGTGCCGGCGAGTTGCACGACCAATG GCGCGACGATCCGTTGATCAGTACCGCGTTCGCCCCGCATGCGCCGTACACCGTCAACGATGCCAACTTCGAACGCGTGC GCATGCTGGCCGACCAGCTCGACATCCCCGTGCATCTGCATACGCACGAAACCGCGCAGGAAGTGGCCGATTCGATCAAG CAGTACGGCCAGCGCCCGCTGGCGCGGCTGGATCGCCTGGGCCTGGTCAACGACCGCCTGATCGCGGTGCACATGACCCA GCTCACCGATGCGGAAATCCATCTGTGCGCCGAGCGCGGCGTCAGCGTGGTGCATTGCCCCGAATCCAATCTCAAGCTCG CCTCGGGTTTTTGCCCGGCATGCGCGCTGCAGCGCGCGGGCGTGAATCTGGCCATCGGCACCGACGGCTGCGCCAGCAAC AACGACCTGGACATGTTCAGCGAGAACCGGACCGCCGCGATCCTGGCCAAGGCCGTGGCCAACGATGCGACCGCGCTGGA TGCGGCCACCACCTTGCGCGCGGCCACCCTGGGCGGCGCGCGCGCCTTGGGCTTGGGCGACACCATCGGTTCGATCGAGG TCGGCAAGCAGGCCGACCTGGTCTGCGTGGACCTGTCTGCACTGGAAACCCAGCCGCTGCACCATGTGTTGTCGCAGTTG ATCTACGCGGCCGGCCGCCATCAGGTCACCGATGTGTGGATCGCCGGCAAGCCCAAACTGGTGCAGCGCGAGCTCATCGA CATGGATACCGCCGCCCTGGTCGCCAACGCGCGGCAATGGCGCGAACGCATCCGCACCGTCCGCGCCTGA
Upstream 100 bases:
>100_bases AGCGCACGCACCGCCAGCGCCAGCTGCTGCGCTACGACGGCACGCGGTATGTGCCTGTGTCACGCTCCGACGACTCCTGG CCGTTCGGCAACTAACTTCA
Downstream 100 bases:
>100_bases GCGCGCGTTACCGCATCACGGAGCCCCCCGCATGAATTCGAATACGCACGCCAAATCCAGCAATTTCCATCAGAGCGAGC TGGATAAATTCGCCGCACTG
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MDPLMTNAPPEPCDLLIEAGYVVPIEPHAVVLEDHAVAVSHGVIVAVLPIADASARFAPKQTVSRPDAALMPGLVNAHTH NPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFFADVQAAVYKQHGFRALVGA VIIDFPTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDIPVHLHTHETAQEVADSIK QYGQRPLARLDRLGLVNDRLIAVHMTQLTDAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRAGVNLAIGTDGCASN NDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGLGDTIGSIEVGKQADLVCVDLSALETQPLHHVLSQL IYAAGRHQVTDVWIAGKPKLVQRELIDMDTAALVANARQWRERIRTVRA
Sequences:
>Translated_449_residues MDPLMTNAPPEPCDLLIEAGYVVPIEPHAVVLEDHAVAVSHGVIVAVLPIADASARFAPKQTVSRPDAALMPGLVNAHTH NPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFFADVQAAVYKQHGFRALVGA VIIDFPTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDIPVHLHTHETAQEVADSIK QYGQRPLARLDRLGLVNDRLIAVHMTQLTDAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRAGVNLAIGTDGCASN NDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGLGDTIGSIEVGKQADLVCVDLSALETQPLHHVLSQL IYAAGRHQVTDVWIAGKPKLVQRELIDMDTAALVANARQWRERIRTVRA >Mature_449_residues MDPLMTNAPPEPCDLLIEAGYVVPIEPHAVVLEDHAVAVSHGVIVAVLPIADASARFAPKQTVSRPDAALMPGLVNAHTH NPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYFFADVQAAVYKQHGFRALVGA VIIDFPTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDIPVHLHTHETAQEVADSIK QYGQRPLARLDRLGLVNDRLIAVHMTQLTDAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRAGVNLAIGTDGCASN NDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGARALGLGDTIGSIEVGKQADLVCVDLSALETQPLHHVLSQL IYAAGRHQVTDVWIAGKPKLVQRELIDMDTAALVANARQWRERIRTVRA
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=443, Percent_Identity=25.7336343115124, Blast_Score=136, Evalue=3e-32, Organism=Escherichia coli, GI1789249, Length=337, Percent_Identity=27.0029673590504, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI87082177, Length=451, Percent_Identity=23.9467849223947, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17540282, Length=389, Percent_Identity=23.3933161953728, Blast_Score=85, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6319963, Length=344, Percent_Identity=26.7441860465116, Blast_Score=115, Evalue=1e-26, Organism=Drosophila melanogaster, GI24643849, Length=381, Percent_Identity=26.509186351706, Blast_Score=129, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 48415; Mature: 48415
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLMTNAPPEPCDLLIEAGYVVPIEPHAVVLEDHAVAVSHGVIVAVLPIADASARFAPK CCCCCCCCCCCCHHHHEECCEEEECCCCEEEEECCEEEEECCEEEEEEECCCCCCCCCCH QTVSRPDAALMPGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGT HHCCCCCHHHCCCHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEEECCHHHCCCH TLAIAEMLRGGTTCVNENYFFADVQAAVYKQHGFRALVGAVIIDFPTAWASSDDEYFARA HHHHHHHHCCCCEEECCCEEEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHH GELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDIPVHLHTHETAQEVADSIK HHHHHHHCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH QYGQRPLARLDRLGLVNDRLIAVHMTQLTDAEIHLCAERGVSVVHCPESNLKLASGFCPA HHCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHEEEHHCCCEEEECCCCCCEECCCCCHH CALQRAGVNLAIGTDGCASNNDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGA HHHHHCCCEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC RALGLGDTIGSIEVGKQADLVCVDLSALETQPLHHVLSQLIYAAGRHQVTDVWIAGKPKL EEECCCCCCCCEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH VQRELIDMDTAALVANARQWRERIRTVRA HHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDPLMTNAPPEPCDLLIEAGYVVPIEPHAVVLEDHAVAVSHGVIVAVLPIADASARFAPK CCCCCCCCCCCCHHHHEECCEEEECCCCEEEEECCEEEEECCEEEEEEECCCCCCCCCCH QTVSRPDAALMPGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGT HHCCCCCHHHCCCHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEEECCHHHCCCH TLAIAEMLRGGTTCVNENYFFADVQAAVYKQHGFRALVGAVIIDFPTAWASSDDEYFARA HHHHHHHHCCCCEEECCCEEEEHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHH GELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLDIPVHLHTHETAQEVADSIK HHHHHHHCCCCCEEECCCCCCCEEECCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHH QYGQRPLARLDRLGLVNDRLIAVHMTQLTDAEIHLCAERGVSVVHCPESNLKLASGFCPA HHCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHEEEHHCCCEEEECCCCCCEECCCCCHH CALQRAGVNLAIGTDGCASNNDLDMFSENRTAAILAKAVANDATALDAATTLRAATLGGA HHHHHCCCEEEECCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC RALGLGDTIGSIEVGKQADLVCVDLSALETQPLHHVLSQLIYAAGRHQVTDVWIAGKPKL EEECCCCCCCCEECCCCCCEEEEEHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHH VQRELIDMDTAALVANARQWRERIRTVRA HHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA