| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is eutC
Identifier: 21243100
GI number: 21243100
Start: 2760297
End: 2761112
Strand: Direct
Name: eutC
Synonym: XAC2366
Alternate gene names: 21243100
Gene position: 2760297-2761112 (Clockwise)
Preceding gene: 21243099
Following gene: 21243104
Centisome position: 53.33
GC content: 67.65
Gene sequence:
>816_bases ATGAGCGTACCCTCCACACCGCCACGCGATGCCTGGGCGCAACTGCGCCAACTGACCCCCGCGCGCATTGCGCTGGGCCG GGTGGGGACCAGTTTGCCGACGGACGCGCACCTGGAGTTCCAGCTGGCGCATGCGCAGGCACGCGATGCGGTGCATCTGG CATTCGACCCGGCACCGCTTCAGGCCGCACTGGAGCAACGCGGGCGCAGCAACATCTTGCTCCAAAGCGCTGCGGCCGAT CGTCATCAGTATCTGCAACGTCCCGATCTGGGACGGCGCCTGGCCGAGGAAGCCGCCGCCCAGCTACGCGGCCTCACGGC CGTGCACGGCGGCAGACATGACGTTGCGGTGGTGGTCGCTGACGGGCTGTCGGCGCTGGCCGTGCATCGGCACGCGGCGC GCATGCTCGACCAGATCGACGCACTGGCCTCGCAAGAAGGCTGGTCACTCGCCCCGGTGGTATTGGTGAGACAAGGGCGC GTGGCGATCGGCGATGAGGTCGGCGAGCTGCTCGACGCGCGTACCGTGATCGTGCTGATCGGCGAACGCCCGGGCCTGAG TTCGCCCGACAGCCTGGGCCTGTATCTCACCTACACGCCCCGCGTCGGGCTCACCGATGCAGCGCGCAACTGCATTTCCA ACATTCGCGCCGAGGGACTGAGCTACGCCGAGGCGACGCACAAACTGGGATATCTGCTGCGCGAGGCATTCCGCCGAAAA CTCTCTGGCGTGCAGCTGAAGGACGAAGCCGAGCAACCCGCGCTGCTGTCAGGCCCTGCCGATGTTGCGCCGCGCACGTT CTTGCTGCCGGACTGA
Upstream 100 bases:
>100_bases ACGACATCCTGCAGCTGCGCGATGGCCGCTTCGAACTTGGTAGCGACGTACCGGCGCCATTTCGGCGTGCATTGGCACAG GCCAGCGGTAGAGCGGCGCC
Downstream 100 bases:
>100_bases CCTGCGCGGCGTGTGCGAACCCGGAATCGACACCGCTCAGCAAGAAATCCATCCGTTACTTCAACGCACCATCCTGCATA TTGCTGGCGGCATAGGTGCT
Product: ethanolamine ammonia-lyase small subunit
Products: NA
Alternate protein names: Ethanolamine ammonia-lyase small subunit
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MSVPSTPPRDAWAQLRQLTPARIALGRVGTSLPTDAHLEFQLAHAQARDAVHLAFDPAPLQAALEQRGRSNILLQSAAAD RHQYLQRPDLGRRLAEEAAAQLRGLTAVHGGRHDVAVVVADGLSALAVHRHAARMLDQIDALASQEGWSLAPVVLVRQGR VAIGDEVGELLDARTVIVLIGERPGLSSPDSLGLYLTYTPRVGLTDAARNCISNIRAEGLSYAEATHKLGYLLREAFRRK LSGVQLKDEAEQPALLSGPADVAPRTFLLPD
Sequences:
>Translated_271_residues MSVPSTPPRDAWAQLRQLTPARIALGRVGTSLPTDAHLEFQLAHAQARDAVHLAFDPAPLQAALEQRGRSNILLQSAAAD RHQYLQRPDLGRRLAEEAAAQLRGLTAVHGGRHDVAVVVADGLSALAVHRHAARMLDQIDALASQEGWSLAPVVLVRQGR VAIGDEVGELLDARTVIVLIGERPGLSSPDSLGLYLTYTPRVGLTDAARNCISNIRAEGLSYAEATHKLGYLLREAFRRK LSGVQLKDEAEQPALLSGPADVAPRTFLLPD >Mature_270_residues SVPSTPPRDAWAQLRQLTPARIALGRVGTSLPTDAHLEFQLAHAQARDAVHLAFDPAPLQAALEQRGRSNILLQSAAADR HQYLQRPDLGRRLAEEAAAQLRGLTAVHGGRHDVAVVVADGLSALAVHRHAARMLDQIDALASQEGWSLAPVVLVRQGRV AIGDEVGELLDARTVIVLIGERPGLSSPDSLGLYLTYTPRVGLTDAARNCISNIRAEGLSYAEATHKLGYLLREAFRRKL SGVQLKDEAEQPALLSGPADVAPRTFLLPD
Specific function: Ethanolamine utilization. [C]
COG id: COG4302
COG function: function code E; Ethanolamine ammonia-lyase, small subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eutC family
Homologues:
Organism=Escherichia coli, GI1788781, Length=240, Percent_Identity=36.6666666666667, Blast_Score=136, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): EUTC_XANAC (Q8PK11)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642682.1 - GeneID: 1156437 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2366 - NMPDR: fig|190486.1.peg.2326 - HOGENOM: HBG363176 - OMA: RNCVSNI - ProtClustDB: PRK05465 - BioCyc: XAXO190486:XAC2366-MONOMER - BRENDA: 4.3.1.7 - HAMAP: MF_00601 - InterPro: IPR009246 - PIRSF: PIRSF018982
Pfam domain/function: PF05985 EutC
EC number: =4.3.1.7
Molecular weight: Translated: 29154; Mature: 29022
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVPSTPPRDAWAQLRQLTPARIALGRVGTSLPTDAHLEFQLAHAQARDAVHLAFDPAPL CCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEECHHCCCCEEEEECCHHH QAALEQRGRSNILLQSAAADRHQYLQRPDLGRRLAEEAAAQLRGLTAVHGGRHDVAVVVA HHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEE DGLSALAVHRHAARMLDQIDALASQEGWSLAPVVLVRQGRVAIGDEVGELLDARTVIVLI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCEEEEEE GERPGLSSPDSLGLYLTYTPRVGLTDAARNCISNIRAEGLSYAEATHKLGYLLREAFRRK ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LSGVQLKDEAEQPALLSGPADVAPRTFLLPD HCCCCCCCCCCCCCEECCCCCCCCCEECCCC >Mature Secondary Structure SVPSTPPRDAWAQLRQLTPARIALGRVGTSLPTDAHLEFQLAHAQARDAVHLAFDPAPL CCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEECHHCCCCEEEEECCHHH QAALEQRGRSNILLQSAAADRHQYLQRPDLGRRLAEEAAAQLRGLTAVHGGRHDVAVVVA HHHHHHCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHCCCCCCCEEEEEE DGLSALAVHRHAARMLDQIDALASQEGWSLAPVVLVRQGRVAIGDEVGELLDARTVIVLI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEHHHHHHHHCCCEEEEEE GERPGLSSPDSLGLYLTYTPRVGLTDAARNCISNIRAEGLSYAEATHKLGYLLREAFRRK ECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LSGVQLKDEAEQPALLSGPADVAPRTFLLPD HCCCCCCCCCCCCCEECCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217