| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243104
Identifier: 21243104
GI number: 21243104
Start: 2763473
End: 2764498
Strand: Direct
Name: 21243104
Synonym: XAC2370
Alternate gene names: NA
Gene position: 2763473-2764498 (Clockwise)
Preceding gene: 21243100
Following gene: 21243107
Centisome position: 53.39
GC content: 58.48
Gene sequence:
>1026_bases ATGACATATATGCCTAAAATTACATTCCTGCGTGCTTCCTGCGCGGCCCTAGCCTTCCTAGTGATTACCGACGTGCCTGC AAGCACAAATTCGGTCAACCTCTCCGCCGGCACCATCGTGCAGCACGTTGTTCCGACTGCTCAGCGAGATGAGAGTGCTT CCTACTGGACCCTCGGACGGATGCAAGCTGCTGTTTCCGCATTATTCGTGGATGCCAACCCGGTCGACGGCGACCCGCCA GAGTTGCAGAATTCGGCATTGGCCCATGGGAAAAACCGGAGCGGAAAGTTGAAGTTGGTGACAAGATCGGTGCCAACGCC GAAGACGGTTCCGTCCGTGCCGGTTCCAGGATTCTCCCCCGCAGCCCACCTCGGCGTGGTCTTCTTTCGAGCGAACGGCA TAGATCAGCGCTGCACTGGCAATGCGGTCGTCTCCGATTCCGGGAACGTCGTAGCCACCTCGGGGCGATGCGTCTCTGCC CTAGCAGGCAAGTTTGTGTCGGACTTGGTGTTCGTGCCAGCCTACAACGGTACCGCCCCCTATGGTGTTTGGCCTGCGGC GACCATCACGGCCGATGATCGCTGGGTCTCAGAGCGAGCCGTGGACTACGATACGGCCTTCTTCCAGGTGCAAGCTCCCA TGACAATGAAGCTCTCTGGCGCCACTTTGTCGAATACTGTAGGAGCGTCTGGCGTTCGCTTTGACGGTCAGCAGGACGAC AACGAATATCGGGTAACTGGCTACAACACCGACCCTGGCGCCAATGGGAACACGCCTGTCAGCGTGACCAGCACAGCAGA GCCGAACCCATGGATGAACAAGGACTATGCCATTGAAGGCCTGGAGTGGGACGCACGCTCCGGTGTCAGCGGCTCACCGT GGGTTTCGACCGACGAGGATCCCGTGCAGGACGTCGAAGTCGGCATGACCTCATTTGCCTATAAGCAGTTCACCCACGCT TCGTTCGGTCCTCAGTGGACGTCAGCAATCCGTAACCTGTATCAGACCGCAGCAGCCTCGAACTAA
Upstream 100 bases:
>100_bases CACACACTGCGATTTAATCGTAAATTATTTATTTTATATAATTTTAATTAATCCACTCAGATCGCCCAACTCCAAGCAAA ACATACAGGTTAAGATAATA
Downstream 100 bases:
>100_bases GGAAGCTCTGAACAACGGACCACAGATACGCGACACGACCCGCCTCATGTTGAGGAGTGATCCATGCAACTGACGTTCGG TGACGCTGAGGGCCTAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTYMPKITFLRASCAALAFLVITDVPASTNSVNLSAGTIVQHVVPTAQRDESASYWTLGRMQAAVSALFVDANPVDGDPP ELQNSALAHGKNRSGKLKLVTRSVPTPKTVPSVPVPGFSPAAHLGVVFFRANGIDQRCTGNAVVSDSGNVVATSGRCVSA LAGKFVSDLVFVPAYNGTAPYGVWPAATITADDRWVSERAVDYDTAFFQVQAPMTMKLSGATLSNTVGASGVRFDGQQDD NEYRVTGYNTDPGANGNTPVSVTSTAEPNPWMNKDYAIEGLEWDARSGVSGSPWVSTDEDPVQDVEVGMTSFAYKQFTHA SFGPQWTSAIRNLYQTAAASN
Sequences:
>Translated_341_residues MTYMPKITFLRASCAALAFLVITDVPASTNSVNLSAGTIVQHVVPTAQRDESASYWTLGRMQAAVSALFVDANPVDGDPP ELQNSALAHGKNRSGKLKLVTRSVPTPKTVPSVPVPGFSPAAHLGVVFFRANGIDQRCTGNAVVSDSGNVVATSGRCVSA LAGKFVSDLVFVPAYNGTAPYGVWPAATITADDRWVSERAVDYDTAFFQVQAPMTMKLSGATLSNTVGASGVRFDGQQDD NEYRVTGYNTDPGANGNTPVSVTSTAEPNPWMNKDYAIEGLEWDARSGVSGSPWVSTDEDPVQDVEVGMTSFAYKQFTHA SFGPQWTSAIRNLYQTAAASN >Mature_340_residues TYMPKITFLRASCAALAFLVITDVPASTNSVNLSAGTIVQHVVPTAQRDESASYWTLGRMQAAVSALFVDANPVDGDPPE LQNSALAHGKNRSGKLKLVTRSVPTPKTVPSVPVPGFSPAAHLGVVFFRANGIDQRCTGNAVVSDSGNVVATSGRCVSAL AGKFVSDLVFVPAYNGTAPYGVWPAATITADDRWVSERAVDYDTAFFQVQAPMTMKLSGATLSNTVGASGVRFDGQQDDN EYRVTGYNTDPGANGNTPVSVTSTAEPNPWMNKDYAIEGLEWDARSGVSGSPWVSTDEDPVQDVEVGMTSFAYKQFTHAS FGPQWTSAIRNLYQTAAASN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36174; Mature: 36043
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYMPKITFLRASCAALAFLVITDVPASTNSVNLSAGTIVQHVVPTAQRDESASYWTLGR CCCCCCHHHHHHHHHHHEEHHEECCCCCCCEEECCHHHHHHHHCCCCCCCCCCCEEEHHH MQAAVSALFVDANPVDGDPPELQNSALAHGKNRSGKLKLVTRSVPTPKTVPSVPVPGFSP HHHHHHEEEEECCCCCCCCCHHHCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC AAHLGVVFFRANGIDQRCTGNAVVSDSGNVVATSGRCVSALAGKFVSDLVFVPAYNGTAP HHHEEEEEEEECCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHEEEEECCCCCCC YGVWPAATITADDRWVSERAVDYDTAFFQVQAPMTMKLSGATLSNTVGASGVRFDGQQDD CCCCCCEEEECCCCCHHHHHCCCCCEEEEEECCEEEEECCCEECCCCCCCCEEECCCCCC NEYRVTGYNTDPGANGNTPVSVTSTAEPNPWMNKDYAIEGLEWDARSGVSGSPWVSTDED CCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC PVQDVEVGMTSFAYKQFTHASFGPQWTSAIRNLYQTAAASN CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TYMPKITFLRASCAALAFLVITDVPASTNSVNLSAGTIVQHVVPTAQRDESASYWTLGR CCCCCHHHHHHHHHHHEEHHEECCCCCCCEEECCHHHHHHHHCCCCCCCCCCCEEEHHH MQAAVSALFVDANPVDGDPPELQNSALAHGKNRSGKLKLVTRSVPTPKTVPSVPVPGFSP HHHHHHEEEEECCCCCCCCCHHHCHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC AAHLGVVFFRANGIDQRCTGNAVVSDSGNVVATSGRCVSALAGKFVSDLVFVPAYNGTAP HHHEEEEEEEECCCCCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHEEEEECCCCCCC YGVWPAATITADDRWVSERAVDYDTAFFQVQAPMTMKLSGATLSNTVGASGVRFDGQQDD CCCCCCEEEECCCCCHHHHHCCCCCEEEEEECCEEEEECCCEECCCCCCCCEEECCCCCC NEYRVTGYNTDPGANGNTPVSVTSTAEPNPWMNKDYAIEGLEWDARSGVSGSPWVSTDED CCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCC PVQDVEVGMTSFAYKQFTHASFGPQWTSAIRNLYQTAAASN CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA