| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21243068
Identifier: 21243068
GI number: 21243068
Start: 2726277
End: 2726897
Strand: Direct
Name: 21243068
Synonym: XAC2333
Alternate gene names: NA
Gene position: 2726277-2726897 (Clockwise)
Preceding gene: 21243067
Following gene: 21243071
Centisome position: 52.68
GC content: 62.0
Gene sequence:
>621_bases ATGCGAATGCGCTATCAGGGACGTCTCAGCGACTGGAATGATCACAAGGGCTTTGGCTTCGTCACGCCCCATGGTGGTGG CGACCGTGCATTCGTCCATATCAGCGCATTTGCACAGCAGACGCGTCGCCCGCGCGATGGGGAGATCATCACGTATGCAA TCGAACGCGATGCGCACAAGCGCCTGAATGCCACGCAAGTGCGTTGGGCAGACCGTACCACCGCCGCCAGAACCGAACAA CGTCGCAGCGGGTTGCCGCGCAAGACGCTGGCTGCGGTGTCGATGCTCGCCTTGGCGGCGGCCACGCTGATGCACGTGCT ACCGGTGATCGTCCCGCTCTGGTACGCGGCGGCCAGCCTGGTCACGCTGCTGATCTATGCGATGGACAAATCGGCCGCGC AACGCAATCAATGGCGCACACCCGAATCCAGCTTGCACCTGCTGGCGCTGATCGGTGGCTGGCCAGGTGCATTGCTGGCG CAGGAAATCCACCGGCACAAATGCAGCAAGGCGGCGTTTCAGCTGACGTTCTGGCTCACGGTTGCGTTGAATGTCAGCGC ACTGGTACTGGCAGTGACCGAGACCGACCTGATGGCCACGCTTCCGGCGGTGTTTGATTGA
Upstream 100 bases:
>100_bases GCTGCAATACGGTAACCATCACCGCTGTTTTGCCGGCTGAGCAATTGGTGCGTGATACGCGCGCAGACCGCACCGGCAAG CCACGCCATCCAACAGAGCG
Downstream 100 bases:
>100_bases ACGCGATCAACAACGTGTGGTCAGGTGATCAACGCGCATCCCGTGACCACGTTCGAGGACCGCAGCGATTGACTACGCGT TCTGATCGAGCAGCTCCAGC
Product: integral membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MRMRYQGRLSDWNDHKGFGFVTPHGGGDRAFVHISAFAQQTRRPRDGEIITYAIERDAHKRLNATQVRWADRTTAARTEQ RRSGLPRKTLAAVSMLALAAATLMHVLPVIVPLWYAAASLVTLLIYAMDKSAAQRNQWRTPESSLHLLALIGGWPGALLA QEIHRHKCSKAAFQLTFWLTVALNVSALVLAVTETDLMATLPAVFD
Sequences:
>Translated_206_residues MRMRYQGRLSDWNDHKGFGFVTPHGGGDRAFVHISAFAQQTRRPRDGEIITYAIERDAHKRLNATQVRWADRTTAARTEQ RRSGLPRKTLAAVSMLALAAATLMHVLPVIVPLWYAAASLVTLLIYAMDKSAAQRNQWRTPESSLHLLALIGGWPGALLA QEIHRHKCSKAAFQLTFWLTVALNVSALVLAVTETDLMATLPAVFD >Mature_206_residues MRMRYQGRLSDWNDHKGFGFVTPHGGGDRAFVHISAFAQQTRRPRDGEIITYAIERDAHKRLNATQVRWADRTTAARTEQ RRSGLPRKTLAAVSMLALAAATLMHVLPVIVPLWYAAASLVTLLIYAMDKSAAQRNQWRTPESSLHLLALIGGWPGALLA QEIHRHKCSKAAFQLTFWLTVALNVSALVLAVTETDLMATLPAVFD
Specific function: Unknown
COG id: COG3326
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22926; Mature: 22926
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMRYQGRLSDWNDHKGFGFVTPHGGGDRAFVHISAFAQQTRRPRDGEIITYAIERDAHK CCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCHHH RLNATQVRWADRTTAARTEQRRSGLPRKTLAAVSMLALAAATLMHVLPVIVPLWYAAASL CCCCHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTLLIYAMDKSAAQRNQWRTPESSLHLLALIGGWPGALLAQEIHRHKCSKAAFQLTFWLT HHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VALNVSALVLAVTETDLMATLPAVFD HHHHHHHEEEEEEHHHHHHHHHHHCC >Mature Secondary Structure MRMRYQGRLSDWNDHKGFGFVTPHGGGDRAFVHISAFAQQTRRPRDGEIITYAIERDAHK CCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCHHH RLNATQVRWADRTTAARTEQRRSGLPRKTLAAVSMLALAAATLMHVLPVIVPLWYAAASL CCCCHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTLLIYAMDKSAAQRNQWRTPESSLHLLALIGGWPGALLAQEIHRHKCSKAAFQLTFWLT HHHHHHHHHHHHHHHHCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH VALNVSALVLAVTETDLMATLPAVFD HHHHHHHEEEEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA