| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is cmk
Identifier: 21243034
GI number: 21243034
Start: 2689759
End: 2690442
Strand: Reverse
Name: cmk
Synonym: XAC2299
Alternate gene names: 21243034
Gene position: 2690442-2689759 (Counterclockwise)
Preceding gene: 21243041
Following gene: 21243033
Centisome position: 51.98
GC content: 65.64
Gene sequence:
>684_bases ATGACCGACCTGTCGCCCGTCCTCACCATCGATGGCCCCTCCGGTGCCGGCAAGGGCACCGTGAGCCGGATCGTGGCCGC CCGGCTGGGCTGGCATTACCTCGATTCGGGTGCACTGTATCGCGCTGTCGGAGTCGCTGCGAGCTGGGCCGACCTGGATG TCTCCGACCCGGCAGCGCTGGTGCGCTGCACCTTCGACACCAAGGTGGAATTCGACGATGCGGGAGAGGCAGGGTTGCGC GTGCTGGTCAATGGCGCAGACGCGACCGGTGAGCTGCGCCTGGAAACTACCGGCGCGCTGGCCTCGGCCATTGCGGCCAT TCCCGAGGTTCGCAGCGCCCTGAAGGAGCGCCAACGCGCATTCAGGCGCGCGCCCGGCCTGGTTGCCGACGGGCGCGACA TGGGCACGGTGATCTTTCCCGATGCTGCCTACAAGGTGTTTCTGACCGCCAGTGCCGAAGAACGTGCGGGTCGTCGCCAT AAACAGTTGATGGAAAAGGGTGTTCCGGTTATCTTTGATGACCTGCTGCGCGAGATCATGGCCCGTGATGCCCGTGATGC GCAGCGGGTGGTGGCGCCATTGCGGCCGGCCGAAGACGCCGTGCTGATCGATACCAGCGGAATGGGAATCGAAGATGTCG TCCAGCGTGTGGTCGGGTTGCTCGCAGGCCGCACGCCGTCGTAA
Upstream 100 bases:
>100_bases CGGCAATTCTAACCGGCTTTTCGTCGTGCTTTCAAGTGGTTGCAGCGCGATCGCGGCGAGCGGCGCTACACTACGGACTG ATGACCTTCCGGAAACCTGA
Downstream 100 bases:
>100_bases GCGTTTCGCAAGCGGGTTTGCCCCGCCGACCGTAAGGCGTTCCAAAGCTCCGTCGCGCATCCTGCGTGGCGGTTCTATGA CTTCCAACCGACTCGCTGTC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTDLSPVLTIDGPSGAGKGTVSRIVAARLGWHYLDSGALYRAVGVAASWADLDVSDPAALVRCTFDTKVEFDDAGEAGLR VLVNGADATGELRLETTGALASAIAAIPEVRSALKERQRAFRRAPGLVADGRDMGTVIFPDAAYKVFLTASAEERAGRRH KQLMEKGVPVIFDDLLREIMARDARDAQRVVAPLRPAEDAVLIDTSGMGIEDVVQRVVGLLAGRTPS
Sequences:
>Translated_227_residues MTDLSPVLTIDGPSGAGKGTVSRIVAARLGWHYLDSGALYRAVGVAASWADLDVSDPAALVRCTFDTKVEFDDAGEAGLR VLVNGADATGELRLETTGALASAIAAIPEVRSALKERQRAFRRAPGLVADGRDMGTVIFPDAAYKVFLTASAEERAGRRH KQLMEKGVPVIFDDLLREIMARDARDAQRVVAPLRPAEDAVLIDTSGMGIEDVVQRVVGLLAGRTPS >Mature_226_residues TDLSPVLTIDGPSGAGKGTVSRIVAARLGWHYLDSGALYRAVGVAASWADLDVSDPAALVRCTFDTKVEFDDAGEAGLRV LVNGADATGELRLETTGALASAIAAIPEVRSALKERQRAFRRAPGLVADGRDMGTVIFPDAAYKVFLTASAEERAGRRHK QLMEKGVPVIFDDLLREIMARDARDAQRVVAPLRPAEDAVLIDTSGMGIEDVVQRVVGLLAGRTPS
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily
Homologues:
Organism=Escherichia coli, GI1787139, Length=218, Percent_Identity=51.8348623853211, Blast_Score=216, Evalue=7e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KCY_XANAC (Q8PK76)
Other databases:
- EMBL: AE008923 - RefSeq: NP_642616.1 - ProteinModelPortal: Q8PK76 - SMR: Q8PK76 - GeneID: 1156370 - GenomeReviews: AE008923_GR - KEGG: xac:XAC2299 - NMPDR: fig|190486.1.peg.2260 - HOGENOM: HBG354377 - OMA: DIGTVIC - ProtClustDB: PRK00023 - BioCyc: XAXO190486:XAC2299-MONOMER - BRENDA: 2.7.4.14 - GO: GO:0005737 - HAMAP: MF_00238 - InterPro: IPR003136 - InterPro: IPR011994 - PANTHER: PTHR21299:SF2 - TIGRFAMs: TIGR00017
Pfam domain/function: PF02224 Cytidylate_kin
EC number: =2.7.4.14
Molecular weight: Translated: 24096; Mature: 23965
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSPVLTIDGPSGAGKGTVSRIVAARLGWHYLDSGALYRAVGVAASWADLDVSDPAAL CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEE VRCTFDTKVEFDDAGEAGLRVLVNGADATGELRLETTGALASAIAAIPEVRSALKERQRA EEEECCCEECCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH FRRAPGLVADGRDMGTVIFPDAAYKVFLTASAEERAGRRHKQLMEKGVPVIFDDLLREIM HHHCCCCEECCCCCCEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH ARDARDAQRVVAPLRPAEDAVLIDTSGMGIEDVVQRVVGLLAGRTPS HCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDLSPVLTIDGPSGAGKGTVSRIVAARLGWHYLDSGALYRAVGVAASWADLDVSDPAAL CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEE VRCTFDTKVEFDDAGEAGLRVLVNGADATGELRLETTGALASAIAAIPEVRSALKERQRA EEEECCCEECCCCCCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH FRRAPGLVADGRDMGTVIFPDAAYKVFLTASAEERAGRRHKQLMEKGVPVIFDDLLREIM HHHCCCCEECCCCCCEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHH ARDARDAQRVVAPLRPAEDAVLIDTSGMGIEDVVQRVVGLLAGRTPS HCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217