| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21243041
Identifier: 21243041
GI number: 21243041
Start: 2695466
End: 2696302
Strand: Reverse
Name: 21243041
Synonym: XAC2306
Alternate gene names: NA
Gene position: 2696302-2695466 (Counterclockwise)
Preceding gene: 21243042
Following gene: 21243034
Centisome position: 52.1
GC content: 64.76
Gene sequence:
>837_bases GTGCAGCGCGGCAATCGTGATCAGTCAGCGAACGTCGCGCAGTCACCCGCCGCAGCGTCGCGTGAAATGACCCTGGTCAC GCTCAACCTGCATCACGATCGCGAAGACTGGCCGGCGCGACGCGCGCATATCGCCAAGGAACTCAAGCGACTGGCGCCGG ATGTGATTGCGTTGCAGGAAGTGATCGAGCGCCGCGGCAGCGTGGAAAATCAGGCCGCCTGGCTCGCGCGCAAGCTCGGC TATGACTACATCTTCGCCTCGGTCGATCCGGTCGGCGCCCCCAAACGCTACGGCAACGCCGTGTTGAGCCGCCGCAGGGT GCTCGCCACGCAGCAGCGCCTGCTGCAGCCCCTGGACGATTACCGTGTCGCCGCGCATCTGCAGGTGGATGTCGACGGTC AACCGGTCAACGTCTACGTCACCCATCTCAACGAACGCGCCGACGCACGCGGTACCGGCATACGCACGCGCCAGGTGGCC GATCTGCTGGACTTCATCGCCTCCAACAGCGCACAGGCGCCGGTGGTGATCGCCGGCGATTTCAACACCGCCGCCGACAC GCTCGATCTGCAAGCGCTACGCAAGGGCTACGGCGACAGCTACGGCAGCGTACATCGCAATAGCGACGCCACGGTCAGCA CCTTGAACATGCACGTCTTCGACAGGCCTGCGCGCATCGATCATGTGTTTTTCCAGCAGAACCGCCTGCTGGCCCGCGAA GCCCGCATCCTGTTCGACACGCCTTATGCCGAAGGCCGCTGGGCATCGGATCACTATGGGGTGTGGGTACGCCTGCAGCT CGCGCCGGAGCATCCAGCAATCAACCGGACGCCGTAG
Upstream 100 bases:
>100_bases GCCAGCACGGCGAAGTTCCGAACGGCCGCTCATGTTGGTCGCCCTCCTGCTGTTGTCCACCGGCGTGCAGGCTGGACAAG CCGGGCAGGGCGTTTCCTCT
Downstream 100 bases:
>100_bases GAGCGCACCTGGGCGCGACAGGGATTTACCGGTAAAGCCTCATCGCGCCCGGGTGTGCTCCTACGAACGGTCTGGATCTG GCGGATTCAGCGCCGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Secreted Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MQRGNRDQSANVAQSPAAASREMTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEVIERRGSVENQAAWLARKLG YDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDDYRVAAHLQVDVDGQPVNVYVTHLNERADARGTGIRTRQVA DLLDFIASNSAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDRPARIDHVFFQQNRLLARE ARILFDTPYAEGRWASDHYGVWVRLQLAPEHPAINRTP
Sequences:
>Translated_278_residues MQRGNRDQSANVAQSPAAASREMTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEVIERRGSVENQAAWLARKLG YDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDDYRVAAHLQVDVDGQPVNVYVTHLNERADARGTGIRTRQVA DLLDFIASNSAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDRPARIDHVFFQQNRLLARE ARILFDTPYAEGRWASDHYGVWVRLQLAPEHPAINRTP >Mature_278_residues MQRGNRDQSANVAQSPAAASREMTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEVIERRGSVENQAAWLARKLG YDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDDYRVAAHLQVDVDGQPVNVYVTHLNERADARGTGIRTRQVA DLLDFIASNSAQAPVVIAGDFNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDRPARIDHVFFQQNRLLARE ARILFDTPYAEGRWASDHYGVWVRLQLAPEHPAINRTP
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31199; Mature: 31199
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRGNRDQSANVAQSPAAASREMTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQE CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHH VIERRGSVENQAAWLARKLGYDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDD HHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHC YRVAAHLQVDVDGQPVNVYVTHLNERADARGTGIRTRQVADLLDFIASNSAQAPVVIAGD CEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC FNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDRPARIDHVFFQQNRLLARE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCHHHHHH ARILFDTPYAEGRWASDHYGVWVRLQLAPEHPAINRTP CEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure MQRGNRDQSANVAQSPAAASREMTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQE CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHH VIERRGSVENQAAWLARKLGYDYIFASVDPVGAPKRYGNAVLSRRRVLATQQRLLQPLDD HHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHC YRVAAHLQVDVDGQPVNVYVTHLNERADARGTGIRTRQVADLLDFIASNSAQAPVVIAGD CEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEC FNTAADTLDLQALRKGYGDSYGSVHRNSDATVSTLNMHVFDRPARIDHVFFQQNRLLARE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCHHHHHH ARILFDTPYAEGRWASDHYGVWVRLQLAPEHPAINRTP CEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA